Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 CACYBPP2-201ENST00000453625 678 ntBASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 AL359273.1-201ENST00000510918 627 ntBASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 AC074344.1-201ENST00000512823 224 ntBASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 RNU6-358P-201ENST00000516564 75 ntBASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 RN7SKP258-201ENST00000517151 304 ntBASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 AC005951.2-201ENST00000576282 495 ntBASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 MIR3921-201ENST00000577308 85 ntBASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 MIR4775-201ENST00000581168 75 ntBASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 MIR3939-201ENST00000582614 106 ntBASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 AC023043.4-201ENST00000612081 449 ntBASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 AC009033.1-201ENST00000624279 431 ntBASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 API5P2-201ENST00000397055 1498 ntBASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 NACAP2-201ENST00000318548 624 ntBASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 Y_RNA.390-201ENST00000383932 102 ntBASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 RNU6-1029P-201ENST00000384109 107 ntBASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 RNY3P14-201ENST00000384309 102 ntBASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 RNU6-876P-201ENST00000391295 104 ntBASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 RPS26P8-201ENST00000393490 348 ntBASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 MIR1290-201ENST00000408735 78 ntBASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 MIR1183-201ENST00000408856 89 ntBASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 AC073415.1-201ENST00000449240 153 ntBASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 MTND3P10-201ENST00000450967 341 ntBASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 FABP5P13-201ENST00000452144 328 ntBASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 RPS20P20-201ENST00000460498 340 ntBASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 AL049874.1-201ENST00000489560 388 ntBASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 SNORA31.8-201ENST00000516327 108 ntBASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 SNORD60.2-201ENST00000516883 86 ntBASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 RNU6-352P-201ENST00000516908 107 ntBASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 MRPL49P2-201ENST00000521066 465 ntBASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 AC091516.1-201ENST00000549191 703 ntBASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 HIF1AP1-201ENST00000553642 175 ntBASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 AC022968.1-201ENST00000567372 442 ntBASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 AP001029.3-201ENST00000588063 596 ntBASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 AC060780.3-201ENST00000589464 80 ntBASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 PRO1804-201ENST00000623780 2050 ntBASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 USP8P1-201ENST00000494673 3183 ntBASIC3.94□□□□□ -1.78
TRIM54Q9BYV2 FAM35DP-201ENST00000323387 2712 ntBASIC3.93□□□□□ -1.78
TRIM54Q9BYV2 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.93□□□□□ -1.78
TRIM54Q9BYV2 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM54Q9BYV2 CASC19-280ENST00000642102 1351 ntBASIC3.93□□□□□ -1.78
TRIM54Q9BYV2 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.93□□□□□ -1.78
TRIM54Q9BYV2 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.93□□□□□ -1.78
TRIM54Q9BYV2 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM54Q9BYV2 RNU6-451P-201ENST00000362921 107 ntBASIC3.93□□□□□ -1.78
TRIM54Q9BYV2 RNU6-61P-201ENST00000365528 109 ntBASIC3.93□□□□□ -1.78
TRIM54Q9BYV2 AL354719.1-201ENST00000406535 843 ntBASIC3.93□□□□□ -1.78
TRIM54Q9BYV2 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.93□□□□□ -1.78
TRIM54Q9BYV2 RNA5SP118-201ENST00000410385 109 ntBASIC3.93□□□□□ -1.78
TRIM54Q9BYV2 RNU2-29P-201ENST00000410423 189 ntBASIC3.93□□□□□ -1.78
TRIM54Q9BYV2 RN7SKP140-201ENST00000411196 284 ntBASIC3.93□□□□□ -1.78
TRIM54Q9BYV2 OR9R1P-201ENST00000412200 877 ntBASIC3.93□□□□□ -1.78
TRIM54Q9BYV2 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.93□□□□□ -1.78
TRIM54Q9BYV2 MTCYBP8-201ENST00000422855 651 ntBASIC3.93□□□□□ -1.78
TRIM54Q9BYV2 HMGB1P27-201ENST00000431429 603 ntBASIC3.93□□□□□ -1.78
TRIM54Q9BYV2 RPL7P28-201ENST00000437739 740 ntBASIC3.93□□□□□ -1.78
TRIM54Q9BYV2 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM54Q9BYV2 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.93□□□□□ -1.78
TRIM54Q9BYV2 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.93□□□□□ -1.78
TRIM54Q9BYV2 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms