Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.09□□□□□ -1.75
NDC1Q9BTX1 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NDC1Q9BTX1 Y_RNA.128-201ENST00000363391 112 ntBASIC4.09□□□□□ -1.75
NDC1Q9BTX1 Y_RNA.167-201ENST00000363735 109 ntBASIC4.09□□□□□ -1.75
NDC1Q9BTX1 SNORD115-7-201ENST00000365306 82 ntBASIC4.09□□□□□ -1.75
NDC1Q9BTX1 RNU6-61P-201ENST00000365528 109 ntBASIC4.09□□□□□ -1.75
NDC1Q9BTX1 RNU6-474P-201ENST00000384243 107 ntBASIC4.09□□□□□ -1.75
NDC1Q9BTX1 MIR606-201ENST00000384851 96 ntBASIC4.09□□□□□ -1.75
NDC1Q9BTX1 RNA5SP36-201ENST00000410197 133 ntBASIC4.09□□□□□ -1.75
NDC1Q9BTX1 RNU2-43P-201ENST00000410306 190 ntBASIC4.09□□□□□ -1.75
NDC1Q9BTX1 RNU4-14P-201ENST00000410858 122 ntBASIC4.09□□□□□ -1.75
NDC1Q9BTX1 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.09□□□□□ -1.75
NDC1Q9BTX1 AC099677.1-201ENST00000420575 175 ntBASIC4.09□□□□□ -1.75
NDC1Q9BTX1 MTCO2P27-201ENST00000420740 428 ntBASIC4.09□□□□□ -1.75
NDC1Q9BTX1 AL157831.1-201ENST00000426134 473 ntBASIC4.09□□□□□ -1.75
NDC1Q9BTX1 AC093106.2-201ENST00000428212 385 ntBASIC4.09□□□□□ -1.75
NDC1Q9BTX1 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.09□□□□□ -1.75
NDC1Q9BTX1 AC004866.2-201ENST00000438285 481 ntBASIC4.09□□□□□ -1.75
NDC1Q9BTX1 GTF2IP13-201ENST00000438487 386 ntBASIC4.09□□□□□ -1.75
NDC1Q9BTX1 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NDC1Q9BTX1 AC020550.1-201ENST00000447385 163 ntBASIC4.09□□□□□ -1.75
NDC1Q9BTX1 RNU6-1208P-201ENST00000459588 107 ntBASIC4.09□□□□□ -1.75
NDC1Q9BTX1 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.09□□□□□ -1.75
NDC1Q9BTX1 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.09□□□□□ -1.75
NDC1Q9BTX1 CCDC34P1-201ENST00000507441 517 ntBASIC4.09□□□□□ -1.75
NDC1Q9BTX1 DEFB109D-201ENST00000529497 240 ntBASIC4.09□□□□□ -1.75
NDC1Q9BTX1 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.09□□□□□ -1.75
NDC1Q9BTX1 AC022882.1-201ENST00000532142 501 ntBASIC4.09□□□□□ -1.75
NDC1Q9BTX1 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.09□□□□□ -1.75
NDC1Q9BTX1 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.09□□□□□ -1.75
NDC1Q9BTX1 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.09□□□□□ -1.75
NDC1Q9BTX1 MIR3942-201ENST00000585264 109 ntBASIC4.09□□□□□ -1.75
NDC1Q9BTX1 AF038458.1-201ENST00000588406 262 ntBASIC4.09□□□□□ -1.75
NDC1Q9BTX1 VN1R85P-201ENST00000601587 426 ntBASIC4.09□□□□□ -1.75
NDC1Q9BTX1 AL390240.1-201ENST00000612950 384 ntBASIC4.09□□□□□ -1.75
NDC1Q9BTX1 AL450472.3-201ENST00000615578 367 ntBASIC4.09□□□□□ -1.75
NDC1Q9BTX1 SNX18P1Y-201ENST00000616231 511 ntBASIC4.09□□□□□ -1.75
NDC1Q9BTX1 AC006065.5-201ENST00000623427 349 ntBASIC4.09□□□□□ -1.75
NDC1Q9BTX1 AC110801.1-201ENST00000623590 212 ntBASIC4.09□□□□□ -1.75
NDC1Q9BTX1 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.09□□□□□ -1.75
NDC1Q9BTX1 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.09□□□□□ -1.75
NDC1Q9BTX1 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.09□□□□□ -1.75
NDC1Q9BTX1 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NDC1Q9BTX1 AP001350.1-201ENST00000601906 1524 ntBASIC4.09□□□□□ -1.75
NDC1Q9BTX1 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.09□□□□□ -1.75
NDC1Q9BTX1 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
NDC1Q9BTX1 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
NDC1Q9BTX1 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
NDC1Q9BTX1 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.08□□□□□ -1.76
NDC1Q9BTX1 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NDC1Q9BTX1 MIR369-201ENST00000362155 70 ntBASIC4.08□□□□□ -1.76
NDC1Q9BTX1 RNU1-14P-201ENST00000362759 152 ntBASIC4.08□□□□□ -1.76
NDC1Q9BTX1 SNORD42.2-201ENST00000365570 69 ntBASIC4.08□□□□□ -1.76
NDC1Q9BTX1 RNU6-1013P-201ENST00000384180 107 ntBASIC4.08□□□□□ -1.76
NDC1Q9BTX1 RNU6-1297P-201ENST00000384415 104 ntBASIC4.08□□□□□ -1.76
NDC1Q9BTX1 SNORD116-29-201ENST00000384516 83 ntBASIC4.08□□□□□ -1.76
NDC1Q9BTX1 Y_RNA.576-201ENST00000384781 102 ntBASIC4.08□□□□□ -1.76
NDC1Q9BTX1 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
NDC1Q9BTX1 AL583834.1-201ENST00000406943 343 ntBASIC4.08□□□□□ -1.76
NDC1Q9BTX1 RPS3AP52-201ENST00000435639 297 ntBASIC4.08□□□□□ -1.76
NDC1Q9BTX1 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.08□□□□□ -1.76
NDC1Q9BTX1 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
NDC1Q9BTX1 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.08□□□□□ -1.76
NDC1Q9BTX1 RPL23AP81-201ENST00000455252 467 ntBASIC4.08□□□□□ -1.76
NDC1Q9BTX1 VN1R17P-201ENST00000472048 1090 ntBASIC4.08□□□□□ -1.76
NDC1Q9BTX1 AC027575.1-201ENST00000481064 460 ntBASIC4.08□□□□□ -1.76
NDC1Q9BTX1 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.08□□□□□ -1.76
NDC1Q9BTX1 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.08□□□□□ -1.76
NDC1Q9BTX1 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.08□□□□□ -1.76
NDC1Q9BTX1 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.08□□□□□ -1.76
NDC1Q9BTX1 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.08□□□□□ -1.76
NDC1Q9BTX1 Y_RNA.682-201ENST00000516457 100 ntBASIC4.08□□□□□ -1.76
NDC1Q9BTX1 RNU6-273P-201ENST00000516937 96 ntBASIC4.08□□□□□ -1.76
NDC1Q9BTX1 Y_RNA.718-201ENST00000517110 102 ntBASIC4.08□□□□□ -1.76
NDC1Q9BTX1 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.08□□□□□ -1.76
NDC1Q9BTX1 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.08□□□□□ -1.76
NDC1Q9BTX1 AC018630.1-201ENST00000541376 925 ntBASIC4.08□□□□□ -1.76
NDC1Q9BTX1 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.08□□□□□ -1.76
NDC1Q9BTX1 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.08□□□□□ -1.76
NDC1Q9BTX1 RPL23AP97-201ENST00000568955 471 ntBASIC4.08□□□□□ -1.76
NDC1Q9BTX1 BNIP3P25-201ENST00000596023 559 ntBASIC4.08□□□□□ -1.76
NDC1Q9BTX1 AP001330.4-201ENST00000604350 154 ntBASIC4.08□□□□□ -1.76
NDC1Q9BTX1 APOOP1-201ENST00000604695 592 ntBASIC4.08□□□□□ -1.76
NDC1Q9BTX1 AL354984.3-201ENST00000604803 325 ntBASIC4.08□□□□□ -1.76
NDC1Q9BTX1 AP000942.4-201ENST00000604811 241 ntBASIC4.08□□□□□ -1.76
NDC1Q9BTX1 RNA5SP108-201ENST00000605921 117 ntBASIC4.08□□□□□ -1.76
NDC1Q9BTX1 AC116312.1-201ENST00000606841 314 ntBASIC4.08□□□□□ -1.76
NDC1Q9BTX1 FAM27D1-201ENST00000612308 341 ntBASIC4.08□□□□□ -1.76
NDC1Q9BTX1 AC084781.2-201ENST00000615568 161 ntBASIC4.08□□□□□ -1.76
NDC1Q9BTX1 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.08□□□□□ -1.76
NDC1Q9BTX1 MIR8059-201ENST00000620427 81 ntBASIC4.08□□□□□ -1.76
NDC1Q9BTX1 AL023881.1-201ENST00000621088 301 ntBASIC4.08□□□□□ -1.76
NDC1Q9BTX1 AL359757.2-201ENST00000624309 274 ntBASIC4.08□□□□□ -1.76
NDC1Q9BTX1 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.08□□□□□ -1.76
NDC1Q9BTX1 MIR4275-201ENST00000636486 87 ntBASIC4.08□□□□□ -1.76
NDC1Q9BTX1 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.08□□□□□ -1.76
NDC1Q9BTX1 AC087190.4-201ENST00000574616 8334 ntBASIC4.08□□□□□ -1.76
NDC1Q9BTX1 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NDC1Q9BTX1 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.07□□□□□ -1.76
NDC1Q9BTX1 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms