Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 MIR559-201ENST00000385188 96 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 SNORD72-201ENST00000390994 80 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 RPL11P3-201ENST00000395256 523 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 MIR1302-11-201ENST00000408051 138 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 MIR1302-9-201ENST00000408365 138 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 MIR1302-10-201ENST00000408734 138 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 OR51A3P-201ENST00000413596 924 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 RPS26P5-201ENST00000418544 335 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 REREP1Y-201ENST00000422655 198 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AC109583.1-201ENST00000432156 268 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 REREP2Y-201ENST00000439103 200 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 Y_RNA.651-201ENST00000459380 103 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AC079203.1-201ENST00000487972 404 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 MTAPP1-201ENST00000489154 819 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 CYCSP27-201ENST00000527643 293 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 NCAPGP2-201ENST00000557911 754 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 MIR4801-201ENST00000582704 82 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AC022217.4-201ENST00000604389 163 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 MIR1302-2-201ENST00000607096 138 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AC024614.3-201ENST00000637860 256 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 PRNCR1-201ENST00000635449 12727 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 USP33-201ENST00000357428 4155 ntTSL 5 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 FRMPD3-201ENST00000276185 7304 ntAPPRIS P2 TSL 5 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 REL-201ENST00000295025 11255 ntAPPRIS P3 TSL 1 (best) BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 CALN1-202ENST00000395275 9459 ntAPPRIS ALT1 TSL 5 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 RNU6-1120P-201ENST00000362988 108 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 RNU6-238P-201ENST00000363313 106 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 RNU6-283P-201ENST00000364788 107 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 RNU6-59P-201ENST00000384787 107 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 MIR490-201ENST00000384865 128 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 MIR548H4-201ENST00000408689 111 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 RNA5SP306-201ENST00000411087 107 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 HSPE1P12-201ENST00000412576 301 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 CYCSP48-201ENST00000417124 323 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 MTCO1P39-201ENST00000426148 480 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 CRIP1P1-201ENST00000427567 185 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 SEPT14P24-201ENST00000447236 180 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 snoU13.6-201ENST00000458785 104 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 RN7SKP210-201ENST00000459176 261 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 RPL36AP21-201ENST00000490372 323 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AC107222.1-201ENST00000510899 637 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 SNORA18.7-201ENST00000516910 131 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 UBTFL9-201ENST00000534504 1148 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 RPL23AP97-201ENST00000568955 471 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 FAM27B-201ENST00000610601 213 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 RNU6-1192P-201ENST00000612197 107 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 RNU6-489P-201ENST00000618289 107 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AL354798.1-201ENST00000622505 329 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 TTC41P-205ENST00000551270 3963 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms