Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC090517.2-201ENST00000614966 680 ntBASIC3.44□□□□□ -1.86
SNED1Q8TER0 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.44□□□□□ -1.86
SNED1Q8TER0 MIR6817-201ENST00000615588 66 ntBASIC3.44□□□□□ -1.86
SNED1Q8TER0 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.44□□□□□ -1.86
SNED1Q8TER0 AC018926.3-201ENST00000618841 406 ntBASIC3.44□□□□□ -1.86
SNED1Q8TER0 AL157700.1-201ENST00000561973 1432 ntBASIC3.43□□□□□ -1.86
SNED1Q8TER0 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.43□□□□□ -1.86
SNED1Q8TER0 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.43□□□□□ -1.86
SNED1Q8TER0 AL079343.1-201ENST00000572358 1771 ntBASIC3.43□□□□□ -1.86
SNED1Q8TER0 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
SNED1Q8TER0 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.43□□□□□ -1.86
SNED1Q8TER0 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SNED1Q8TER0 HMGB1P5-201ENST00000255320 642 ntBASIC3.43□□□□□ -1.86
SNED1Q8TER0 AC016716.1-201ENST00000265882 708 ntBASIC3.43□□□□□ -1.86
SNED1Q8TER0 FGF7P2-201ENST00000332473 296 ntBASIC3.43□□□□□ -1.86
SNED1Q8TER0 RNU6-797P-201ENST00000363101 109 ntBASIC3.43□□□□□ -1.86
SNED1Q8TER0 SNORD6-201ENST00000365444 73 ntBASIC3.43□□□□□ -1.86
SNED1Q8TER0 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.43□□□□□ -1.86
SNED1Q8TER0 AL139039.1-201ENST00000401900 692 ntBASIC3.43□□□□□ -1.86
SNED1Q8TER0 AL356057.3-201ENST00000402607 340 ntBASIC3.43□□□□□ -1.86
SNED1Q8TER0 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.43□□□□□ -1.86
SNED1Q8TER0 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.43□□□□□ -1.86
SNED1Q8TER0 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.43□□□□□ -1.86
SNED1Q8TER0 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.43□□□□□ -1.86
SNED1Q8TER0 EI24P1-201ENST00000416584 867 ntBASIC3.43□□□□□ -1.86
SNED1Q8TER0 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.43□□□□□ -1.86
SNED1Q8TER0 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.43□□□□□ -1.86
SNED1Q8TER0 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.43□□□□□ -1.86
SNED1Q8TER0 RPL31P54-201ENST00000429803 370 ntBASIC3.43□□□□□ -1.86
SNED1Q8TER0 ZYG11AP1-201ENST00000430329 837 ntBASIC3.43□□□□□ -1.86
SNED1Q8TER0 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.43□□□□□ -1.86
SNED1Q8TER0 RPS25P9-201ENST00000435591 252 ntBASIC3.43□□□□□ -1.86
SNED1Q8TER0 FTH1P1-201ENST00000437933 532 ntBASIC3.43□□□□□ -1.86
SNED1Q8TER0 UBE2V1P5-201ENST00000440070 405 ntBASIC3.43□□□□□ -1.86
SNED1Q8TER0 AC010095.1-201ENST00000443543 144 ntBASIC3.43□□□□□ -1.86
SNED1Q8TER0 AL513124.1-201ENST00000450410 614 ntBASIC3.43□□□□□ -1.86
SNED1Q8TER0 FGF7P6-202ENST00000451282 293 ntBASIC3.43□□□□□ -1.86
SNED1Q8TER0 RPL9P32-201ENST00000464118 620 ntBASIC3.43□□□□□ -1.86
SNED1Q8TER0 AC090525.1-201ENST00000479116 478 ntBASIC3.43□□□□□ -1.86
SNED1Q8TER0 TRBV12-1-201ENST00000479785 344 ntBASIC3.43□□□□□ -1.86
SNED1Q8TER0 AC092451.1-201ENST00000480211 153 ntBASIC3.43□□□□□ -1.86
SNED1Q8TER0 AP001086.1-201ENST00000494882 321 ntBASIC3.43□□□□□ -1.86
SNED1Q8TER0 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.43□□□□□ -1.86
SNED1Q8TER0 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.43□□□□□ -1.86
SNED1Q8TER0 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.43□□□□□ -1.86
SNED1Q8TER0 RNU6-416P-201ENST00000516265 103 ntBASIC3.43□□□□□ -1.86
SNED1Q8TER0 RNU6-314P-201ENST00000516574 104 ntBASIC3.43□□□□□ -1.86
SNED1Q8TER0 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.43□□□□□ -1.86
SNED1Q8TER0 OR5AK1P-201ENST00000524837 922 ntBASIC3.43□□□□□ -1.86
SNED1Q8TER0 OR7K1P-201ENST00000546439 926 ntBASIC3.43□□□□□ -1.86
SNED1Q8TER0 OR6C7P-201ENST00000547875 934 ntBASIC3.43□□□□□ -1.86
SNED1Q8TER0 ADI1P3-201ENST00000549509 470 ntBASIC3.43□□□□□ -1.86
SNED1Q8TER0 AC009063.1-201ENST00000563342 702 ntBASIC3.43□□□□□ -1.86
SNED1Q8TER0 TPRKBP2-201ENST00000565969 475 ntBASIC3.43□□□□□ -1.86
SNED1Q8TER0 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.43□□□□□ -1.86
SNED1Q8TER0 AL589743.7-201ENST00000612637 233 ntBASIC3.43□□□□□ -1.86
SNED1Q8TER0 AL357080.1-201ENST00000617394 239 ntBASIC3.43□□□□□ -1.86
SNED1Q8TER0 U73479.1-201ENST00000618062 168 ntBASIC3.43□□□□□ -1.86
SNED1Q8TER0 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.43□□□□□ -1.86
SNED1Q8TER0 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
SNED1Q8TER0 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SNED1Q8TER0 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.43□□□□□ -1.86
SNED1Q8TER0 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
SNED1Q8TER0 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.42□□□□□ -1.86
SNED1Q8TER0 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.42□□□□□ -1.86
SNED1Q8TER0 TEX21P-201ENST00000447107 1476 ntBASIC3.42□□□□□ -1.86
SNED1Q8TER0 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
SNED1Q8TER0 RNU5F-7P-201ENST00000363696 115 ntBASIC3.42□□□□□ -1.86
SNED1Q8TER0 RNA5SP68-201ENST00000363885 119 ntBASIC3.42□□□□□ -1.86
SNED1Q8TER0 RNU6-660P-201ENST00000364566 109 ntBASIC3.42□□□□□ -1.86
SNED1Q8TER0 RNU6-621P-201ENST00000364752 109 ntBASIC3.42□□□□□ -1.86
SNED1Q8TER0 Y_RNA.390-201ENST00000383932 102 ntBASIC3.42□□□□□ -1.86
SNED1Q8TER0 CYCSP45-201ENST00000402289 315 ntBASIC3.42□□□□□ -1.86
SNED1Q8TER0 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.42□□□□□ -1.86
SNED1Q8TER0 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.42□□□□□ -1.86
SNED1Q8TER0 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.42□□□□□ -1.86
SNED1Q8TER0 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.42□□□□□ -1.86
SNED1Q8TER0 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.42□□□□□ -1.86
SNED1Q8TER0 EPS15P1-201ENST00000448836 336 ntBASIC3.42□□□□□ -1.86
SNED1Q8TER0 UQCRHP3-201ENST00000451503 251 ntBASIC3.42□□□□□ -1.86
SNED1Q8TER0 MTND2P24-201ENST00000453434 806 ntBASIC3.42□□□□□ -1.86
SNED1Q8TER0 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.42□□□□□ -1.86
SNED1Q8TER0 AC068305.1-201ENST00000497406 726 ntBASIC3.42□□□□□ -1.86
SNED1Q8TER0 TMEM248P1-201ENST00000510579 951 ntBASIC3.42□□□□□ -1.86
SNED1Q8TER0 RN7SKP298-201ENST00000515950 94 ntBASIC3.42□□□□□ -1.86
SNED1Q8TER0 RN7SKP244-201ENST00000516513 307 ntBASIC3.42□□□□□ -1.86
SNED1Q8TER0 IGKV2D-23-201ENST00000518179 286 ntBASIC3.42□□□□□ -1.86
SNED1Q8TER0 DEFB108A-201ENST00000530110 222 ntBASIC3.42□□□□□ -1.86
SNED1Q8TER0 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.42□□□□□ -1.86
SNED1Q8TER0 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.42□□□□□ -1.86
SNED1Q8TER0 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SNED1Q8TER0 AL121579.1-201ENST00000555129 305 ntBASIC3.42□□□□□ -1.86
SNED1Q8TER0 AC027176.1-201ENST00000560204 514 ntBASIC3.42□□□□□ -1.86
SNED1Q8TER0 MIR4528-201ENST00000577763 90 ntBASIC3.42□□□□□ -1.86
SNED1Q8TER0 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.42□□□□□ -1.86
SNED1Q8TER0 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.42□□□□□ -1.86
SNED1Q8TER0 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.42□□□□□ -1.86
SNED1Q8TER0 AC091488.1-201ENST00000604239 660 ntBASIC3.42□□□□□ -1.86
SNED1Q8TER0 AC007014.2-201ENST00000615581 479 ntBASIC3.42□□□□□ -1.86
SNED1Q8TER0 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms