Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 RNU6-566P-201ENST00000516790 107 ntBASIC4.43□□□□□ -1.7
SH3RF2Q8TEC5 RNU6-352P-201ENST00000516908 107 ntBASIC4.43□□□□□ -1.7
SH3RF2Q8TEC5 Y_RNA.718-201ENST00000517110 102 ntBASIC4.43□□□□□ -1.7
SH3RF2Q8TEC5 HMGB1P19-201ENST00000517578 577 ntBASIC4.43□□□□□ -1.7
SH3RF2Q8TEC5 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.43□□□□□ -1.7
SH3RF2Q8TEC5 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.43□□□□□ -1.7
SH3RF2Q8TEC5 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.43□□□□□ -1.7
SH3RF2Q8TEC5 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.43□□□□□ -1.7
SH3RF2Q8TEC5 AC126177.3-201ENST00000551839 688 ntBASIC4.43□□□□□ -1.7
SH3RF2Q8TEC5 RPL21P7-201ENST00000557463 483 ntBASIC4.43□□□□□ -1.7
SH3RF2Q8TEC5 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SH3RF2Q8TEC5 AC106785.1-201ENST00000565935 262 ntBASIC4.43□□□□□ -1.7
SH3RF2Q8TEC5 RPL23AP97-201ENST00000568955 471 ntBASIC4.43□□□□□ -1.7
SH3RF2Q8TEC5 SNORD84-203ENST00000584275 78 ntBASIC4.43□□□□□ -1.7
SH3RF2Q8TEC5 AC006116.10-201ENST00000591836 581 ntBASIC4.43□□□□□ -1.7
SH3RF2Q8TEC5 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.43□□□□□ -1.7
SH3RF2Q8TEC5 AC104763.2-201ENST00000604179 382 ntBASIC4.43□□□□□ -1.7
SH3RF2Q8TEC5 AC245389.1-201ENST00000605141 529 ntBASIC4.43□□□□□ -1.7
SH3RF2Q8TEC5 AL670379.4-201ENST00000605279 254 ntBASIC4.43□□□□□ -1.7
SH3RF2Q8TEC5 AL162730.1-201ENST00000605734 292 ntBASIC4.43□□□□□ -1.7
SH3RF2Q8TEC5 AC009570.1-201ENST00000609599 745 ntBASIC4.43□□□□□ -1.7
SH3RF2Q8TEC5 MIR6867-201ENST00000610636 67 ntBASIC4.43□□□□□ -1.7
SH3RF2Q8TEC5 U2.17-201ENST00000611454 95 ntBASIC4.43□□□□□ -1.7
SH3RF2Q8TEC5 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.43□□□□□ -1.7
SH3RF2Q8TEC5 AL359547.2-201ENST00000615810 418 ntBASIC4.43□□□□□ -1.7
SH3RF2Q8TEC5 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.43□□□□□ -1.7
SH3RF2Q8TEC5 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SH3RF2Q8TEC5 AL133243.3-201ENST00000617415 3004 ntBASIC4.43□□□□□ -1.7
SH3RF2Q8TEC5 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SH3RF2Q8TEC5 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SH3RF2Q8TEC5 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.43□□□□□ -1.7
SH3RF2Q8TEC5 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 MTND5P3-201ENST00000438536 1800 ntBASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 RN7SKP224-201ENST00000364140 325 ntBASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 SNORA4.3-201ENST00000365564 137 ntBASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 Y_RNA.422-201ENST00000384054 114 ntBASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 RNU6-43P-201ENST00000384302 107 ntBASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 RNU1-44P-201ENST00000384453 163 ntBASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 RNU6-1127P-201ENST00000384580 107 ntBASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 RPL37P10-201ENST00000412884 288 ntBASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 AL356095.1-201ENST00000417217 199 ntBASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 PPP1R11P2-201ENST00000423543 382 ntBASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 HMGB3P11-201ENST00000440127 604 ntBASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 RPS15AP27-201ENST00000449183 343 ntBASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 AC021146.3-201ENST00000511911 260 ntBASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 RNU6-256P-201ENST00000516747 97 ntBASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 RNU4-60P-201ENST00000517239 135 ntBASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 OR4H12P-201ENST00000556269 907 ntBASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 AC020661.2-201ENST00000560114 134 ntBASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 MIR1254-2-201ENST00000579553 63 ntBASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 MIR3941-201ENST00000582572 103 ntBASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 CYP2C61P-201ENST00000604072 290 ntBASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.42□□□□□ -1.7
SH3RF2Q8TEC5 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SH3RF2Q8TEC5 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SH3RF2Q8TEC5 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SH3RF2Q8TEC5 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SH3RF2Q8TEC5 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SH3RF2Q8TEC5 AC090337.1-201ENST00000579651 2074 ntBASIC4.41□□□□□ -1.7
SH3RF2Q8TEC5 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
SH3RF2Q8TEC5 RNU1-64P-201ENST00000365443 163 ntBASIC4.41□□□□□ -1.7
SH3RF2Q8TEC5 RNA5SP283-201ENST00000365604 119 ntBASIC4.41□□□□□ -1.7
SH3RF2Q8TEC5 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.41□□□□□ -1.7
SH3RF2Q8TEC5 MTCYBP4-201ENST00000401524 249 ntBASIC4.41□□□□□ -1.7
SH3RF2Q8TEC5 MIR548F5-201ENST00000408421 86 ntBASIC4.41□□□□□ -1.7
SH3RF2Q8TEC5 MIR1911-201ENST00000410783 80 ntBASIC4.41□□□□□ -1.7
SH3RF2Q8TEC5 RPL7AP73-201ENST00000413490 353 ntBASIC4.41□□□□□ -1.7
SH3RF2Q8TEC5 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.41□□□□□ -1.7
SH3RF2Q8TEC5 AL117339.2-201ENST00000430475 180 ntBASIC4.41□□□□□ -1.7
SH3RF2Q8TEC5 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.41□□□□□ -1.7
SH3RF2Q8TEC5 AF228730.2-201ENST00000438784 848 ntBASIC4.41□□□□□ -1.7
SH3RF2Q8TEC5 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.41□□□□□ -1.7
SH3RF2Q8TEC5 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SH3RF2Q8TEC5 AC020550.1-201ENST00000447385 163 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms