Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 AC074029.4-201ENST00000624796 1859 ntBASIC4.96□□□□□ -1.61
LINC00116Q8NCU8 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.61
LINC00116Q8NCU8 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
LINC00116Q8NCU8 U3.12-201ENST00000364498 214 ntBASIC4.96□□□□□ -1.62
LINC00116Q8NCU8 MIR490-201ENST00000384865 128 ntBASIC4.96□□□□□ -1.62
LINC00116Q8NCU8 MIR548K-201ENST00000408406 116 ntBASIC4.96□□□□□ -1.62
LINC00116Q8NCU8 RNU6-370P-201ENST00000411008 104 ntBASIC4.96□□□□□ -1.62
LINC00116Q8NCU8 BX323014.1-201ENST00000412876 237 ntBASIC4.96□□□□□ -1.62
LINC00116Q8NCU8 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.96□□□□□ -1.62
LINC00116Q8NCU8 AC083863.1-201ENST00000438811 231 ntBASIC4.96□□□□□ -1.62
LINC00116Q8NCU8 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.96□□□□□ -1.62
LINC00116Q8NCU8 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.96□□□□□ -1.62
LINC00116Q8NCU8 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.96□□□□□ -1.62
LINC00116Q8NCU8 RNU7-59P-201ENST00000459101 61 ntBASIC4.96□□□□□ -1.62
LINC00116Q8NCU8 AC093303.1-201ENST00000514549 295 ntBASIC4.96□□□□□ -1.62
LINC00116Q8NCU8 RNU6-1088P-201ENST00000516850 104 ntBASIC4.96□□□□□ -1.62
LINC00116Q8NCU8 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.96□□□□□ -1.62
LINC00116Q8NCU8 APOOP3-201ENST00000536787 586 ntBASIC4.96□□□□□ -1.62
LINC00116Q8NCU8 AP000763.2-201ENST00000540641 163 ntBASIC4.96□□□□□ -1.62
LINC00116Q8NCU8 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.96□□□□□ -1.62
LINC00116Q8NCU8 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.96□□□□□ -1.62
LINC00116Q8NCU8 AC124068.1-201ENST00000563131 678 ntBASIC4.96□□□□□ -1.62
LINC00116Q8NCU8 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.96□□□□□ -1.62
LINC00116Q8NCU8 RNU1-30P-201ENST00000606575 163 ntBASIC4.96□□□□□ -1.62
LINC00116Q8NCU8 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.96□□□□□ -1.62
LINC00116Q8NCU8 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.96□□□□□ -1.62
LINC00116Q8NCU8 AL136313.1-201ENST00000624804 202 ntBASIC4.96□□□□□ -1.62
LINC00116Q8NCU8 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
LINC00116Q8NCU8 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LINC00116Q8NCU8 AP001284.1-201ENST00000528393 2118 ntBASIC4.96□□□□□ -1.62
LINC00116Q8NCU8 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.96□□□□□ -1.62
LINC00116Q8NCU8 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 Y_RNA.31-201ENST00000362574 102 ntBASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 RNU6-1252P-201ENST00000363054 104 ntBASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 RNU6-179P-201ENST00000363350 107 ntBASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 Y_RNA.197-201ENST00000364004 102 ntBASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 RNVU1-3-201ENST00000364313 161 ntBASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 Y_RNA.395-201ENST00000383945 109 ntBASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 MIR195-201ENST00000385194 87 ntBASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 RNU6-308P-201ENST00000390957 107 ntBASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 RN7SKP177-201ENST00000410567 355 ntBASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 RPL37P10-201ENST00000412884 288 ntBASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 CYCSP32-201ENST00000440548 321 ntBASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 IPO7P1-201ENST00000442031 636 ntBASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 RNU7-152P-201ENST00000458982 64 ntBASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 RNU7-66P-201ENST00000459469 62 ntBASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 RNU6-1208P-201ENST00000459588 107 ntBASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 AC012158.1-204ENST00000483430 465 ntBASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 RPL39P5-202ENST00000512505 151 ntBASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 AC022695.1-201ENST00000522089 237 ntBASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 DEFB109D-201ENST00000529497 240 ntBASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 AC109635.4-202ENST00000531666 412 ntBASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 AL133271.1-201ENST00000538229 291 ntBASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 AC007458.1-201ENST00000542812 373 ntBASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 AC100830.2-201ENST00000581636 240 ntBASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 AC005000.2-201ENST00000605468 310 ntBASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 AL390240.1-201ENST00000612950 384 ntBASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 AL132822.1-201ENST00000617063 513 ntBASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 MIR7702-201ENST00000621931 59 ntBASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 AC244517.12-201ENST00000623581 663 ntBASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 AC119674.1-207ENST00000641355 633 ntBASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 MARK2P15-201ENST00000432204 2186 ntBASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 AC007823.1-201ENST00000569932 1566 ntBASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 AC010329.2-201ENST00000595195 2737 ntBASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.95□□□□□ -1.62
LINC00116Q8NCU8 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
LINC00116Q8NCU8 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LINC00116Q8NCU8 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LINC00116Q8NCU8 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.94□□□□□ -1.62
LINC00116Q8NCU8 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
LINC00116Q8NCU8 AC011978.2-201ENST00000569835 2054 ntBASIC4.94□□□□□ -1.62
LINC00116Q8NCU8 Y_RNA.187-201ENST00000363918 113 ntBASIC4.94□□□□□ -1.62
LINC00116Q8NCU8 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
LINC00116Q8NCU8 AL356057.3-201ENST00000402607 340 ntBASIC4.94□□□□□ -1.62
LINC00116Q8NCU8 AL136372.1-201ENST00000403060 228 ntBASIC4.94□□□□□ -1.62
LINC00116Q8NCU8 RNU2-21P-201ENST00000410368 188 ntBASIC4.94□□□□□ -1.62
LINC00116Q8NCU8 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.94□□□□□ -1.62
LINC00116Q8NCU8 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms