Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CCDC116Q8IYX3 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.31□□□□□ -1.56
CCDC116Q8IYX3 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CCDC116Q8IYX3 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC116Q8IYX3 MIR375-201ENST00000362103 64 ntBASIC5.31□□□□□ -1.56
CCDC116Q8IYX3 RNU6-1249P-201ENST00000363237 111 ntBASIC5.31□□□□□ -1.56
CCDC116Q8IYX3 Y_RNA.308-201ENST00000365043 101 ntBASIC5.31□□□□□ -1.56
CCDC116Q8IYX3 RNU6-1130P-201ENST00000365434 107 ntBASIC5.31□□□□□ -1.56
CCDC116Q8IYX3 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC116Q8IYX3 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC116Q8IYX3 RPS3AP2-201ENST00000407190 754 ntBASIC5.31□□□□□ -1.56
CCDC116Q8IYX3 HMGN1P20-201ENST00000411849 300 ntBASIC5.31□□□□□ -1.56
CCDC116Q8IYX3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC116Q8IYX3 RNF10P1-201ENST00000418589 369 ntBASIC5.31□□□□□ -1.56
CCDC116Q8IYX3 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.31□□□□□ -1.56
CCDC116Q8IYX3 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC116Q8IYX3 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC116Q8IYX3 PTMAP3-201ENST00000447474 330 ntBASIC5.31□□□□□ -1.56
CCDC116Q8IYX3 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC116Q8IYX3 AC087588.1-201ENST00000462203 316 ntBASIC5.31□□□□□ -1.56
CCDC116Q8IYX3 RPS23P6-201ENST00000466136 431 ntBASIC5.31□□□□□ -1.56
CCDC116Q8IYX3 AC140059.1-201ENST00000489238 361 ntBASIC5.31□□□□□ -1.56
CCDC116Q8IYX3 RN7SL591P-201ENST00000496150 292 ntBASIC5.31□□□□□ -1.56
CCDC116Q8IYX3 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC116Q8IYX3 OR7H2P-201ENST00000513483 306 ntBASIC5.31□□□□□ -1.56
CCDC116Q8IYX3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC116Q8IYX3 BNIP3P5-201ENST00000562290 498 ntBASIC5.31□□□□□ -1.56
CCDC116Q8IYX3 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC116Q8IYX3 AC008121.1-201ENST00000603244 268 ntBASIC5.31□□□□□ -1.56
CCDC116Q8IYX3 RNA5SP439-201ENST00000617595 124 ntBASIC5.31□□□□□ -1.56
CCDC116Q8IYX3 AP005431.1-201ENST00000618479 319 ntBASIC5.31□□□□□ -1.56
CCDC116Q8IYX3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC116Q8IYX3 AL451142.2-201ENST00000429076 2090 ntBASIC5.31□□□□□ -1.56
CCDC116Q8IYX3 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC116Q8IYX3 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC116Q8IYX3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CCDC116Q8IYX3 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 RNA5SP30-201ENST00000365552 115 ntBASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 SNORA36C-201ENST00000384289 132 ntBASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 RNU6-21P-201ENST00000384710 107 ntBASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 RNU6-131P-201ENST00000391144 107 ntBASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 RNU5E-9P-201ENST00000411164 104 ntBASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 AL158156.1-201ENST00000422509 473 ntBASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 RPS6P12-201ENST00000432491 726 ntBASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 Z82188.1-201ENST00000436709 154 ntBASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 PPIAP21-201ENST00000464473 501 ntBASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 AC007998.1-201ENST00000474156 672 ntBASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 AC007686.1-201ENST00000488511 463 ntBASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 RPL30P1-201ENST00000488676 339 ntBASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 RN7SL284P-201ENST00000498823 275 ntBASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 GLUD1P3-202ENST00000508551 200 ntBASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 RN7SKP272-201ENST00000516988 232 ntBASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 ATP5F1P5-201ENST00000526403 760 ntBASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 MIR4308-201ENST00000580634 81 ntBASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 AC060766.3-201ENST00000591442 263 ntBASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 AL139395.1-201ENST00000603662 160 ntBASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 MIR1910-201ENST00000636955 80 ntBASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 AC104260.2-201ENST00000623551 3497 ntBASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 OR4F13P-202ENST00000560066 2054 ntBASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
CCDC116Q8IYX3 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 SRRM1P3-201ENST00000426911 2678 ntBASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 UBE2WP1-201ENST00000362030 340 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms