Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.67□□□□□ -1.66
CNKSR3Q6P9H4 Z95327.2-201ENST00000414579 1873 ntBASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 Y_RNA.153-201ENST00000363615 91 ntBASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 Y_RNA.364-201ENST00000365532 101 ntBASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 OR6C66P-201ENST00000414917 930 ntBASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 RPL31P45-201ENST00000419532 356 ntBASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 CYP4F29P-201ENST00000420685 446 ntBASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 RPL21P91-201ENST00000429231 479 ntBASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 FTH1P1-201ENST00000437933 532 ntBASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 MTND1P17-201ENST00000448961 204 ntBASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 RPS24P6-201ENST00000452670 400 ntBASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 RPL23AP81-201ENST00000455252 467 ntBASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 AL162395.1-201ENST00000457882 422 ntBASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 Y_RNA.654-201ENST00000497848 106 ntBASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 AC116562.3-201ENST00000506136 177 ntBASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 MRPS35P2-201ENST00000508242 191 ntBASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 RNU6-635P-201ENST00000516651 102 ntBASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 RNU6-256P-201ENST00000516747 97 ntBASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 AC009812.2-201ENST00000517657 457 ntBASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 IFITM8P-201ENST00000522529 394 ntBASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 AC068587.5-201ENST00000528506 175 ntBASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 AL031666.3-201ENST00000609320 1006 ntBASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 AC099669.2-201ENST00000616549 437 ntBASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 AC091905.2-201ENST00000623143 306 ntBASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 NAA50-211ENST00000630058 177 ntTSL 5 BASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 AC011755.1-201ENST00000623763 2049 ntBASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.66□□□□□ -1.66
CNKSR3Q6P9H4 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CNKSR3Q6P9H4 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
CNKSR3Q6P9H4 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.65□□□□□ -1.66
CNKSR3Q6P9H4 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.65□□□□□ -1.66
CNKSR3Q6P9H4 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
CNKSR3Q6P9H4 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.65□□□□□ -1.66
CNKSR3Q6P9H4 AC244517.1-201ENST00000606030 2086 ntBASIC4.65□□□□□ -1.66
CNKSR3Q6P9H4 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
CNKSR3Q6P9H4 SNORD113-7-201ENST00000363762 77 ntBASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 Y_RNA.234-201ENST00000364409 97 ntBASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 Y_RNA.257-201ENST00000364596 102 ntBASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 SNORA70.4-201ENST00000365509 134 ntBASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 Y_RNA.463-201ENST00000384271 102 ntBASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 RNY1P14-201ENST00000384426 108 ntBASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 AL024474.1-201ENST00000404655 591 ntBASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 CYCSP10-201ENST00000417973 294 ntBASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 Z74021.1-201ENST00000423610 407 ntBASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 MED13P1-201ENST00000428342 171 ntBASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 RPS24P13-201ENST00000442520 397 ntBASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 HMGB1P15-201ENST00000453854 435 ntBASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 AC110794.1-201ENST00000505816 425 ntBASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 AF186190.1-201ENST00000517470 480 ntBASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 IGLVIV-53-201ENST00000520107 367 ntBASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 MTND4P7-201ENST00000523876 130 ntBASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 AP000763.2-201ENST00000540641 163 ntBASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 AC005357.1-201ENST00000588399 301 ntBASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 AC024220.1-201ENST00000603675 484 ntBASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 PRR13P7-201ENST00000605538 430 ntBASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 AC245517.5-201ENST00000611529 162 ntBASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 AL669831.3-213ENST00000636676 183 ntBASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 AC008013.2-202ENST00000637965 364 ntBASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 AL139811.1-201ENST00000424779 2299 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms