Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC0.81□□□□□ -2.28
VPS13DQ5THJ4 AC105313.1-201ENST00000509121 353 ntBASIC0.81□□□□□ -2.28
VPS13DQ5THJ4 U73023.1-201ENST00000603134 700 ntBASIC0.81□□□□□ -2.28
VPS13DQ5THJ4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
VPS13DQ5THJ4 RNU6-882P-201ENST00000391025 103 ntBASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 FABP5P3-201ENST00000437960 408 ntBASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 AC021087.2-201ENST00000504656 1203 ntBASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 AC093281.2-201ENST00000510153 597 ntBASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 FABP5P5-201ENST00000515537 406 ntBASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 AC008121.3-201ENST00000618726 433 ntBASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 AC009541.1-201ENST00000438279 2662 ntBASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 RPL5P19-201ENST00000404228 893 ntBASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 HMGN1P14-201ENST00000412459 517 ntBASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 HMGN2P13-201ENST00000476476 274 ntBASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 AC093801.2-201ENST00000503966 1050 ntBASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 PRELID3BP4-201ENST00000515476 571 ntBASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 AL449363.1-201ENST00000617815 186 ntBASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 AC006249.1-201ENST00000621223 471 ntBASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 MIR150-201ENST00000385048 84 ntBASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 RNU4ATAC16P-201ENST00000408512 126 ntBASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 SSXP9-201ENST00000417503 292 ntBASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 RAB9AP5-201ENST00000437794 597 ntBASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 RAB9AP2-201ENST00000443911 597 ntBASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 HMGB3P17-201ENST00000504195 649 ntBASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 BTF3P12-201ENST00000519620 469 ntBASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 AP005435.4-201ENST00000529514 284 ntBASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 AC106028.5-201ENST00000610332 395 ntBASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 AC097655.1-201ENST00000635075 318 ntBASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 AL356118.1-201ENST00000635272 1078 ntBASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 Y_RNA.251-201ENST00000364551 99 ntBASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 RNU1-52P-201ENST00000384190 164 ntBASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 RNA5SP38-201ENST00000410750 119 ntBASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 RBM43P1-201ENST00000476891 1081 ntBASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 AC114322.1-201ENST00000506771 926 ntBASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 AC005498.1-201ENST00000592125 465 ntBASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 AL031274.2-201ENST00000599419 203 ntBASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 AC116447.1-201ENST00000613153 453 ntBASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 AC007275.1-201ENST00000621243 671 ntBASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 AC073592.7-201ENST00000623659 507 ntBASIC0.8□□□□□ -2.28
VPS13DQ5THJ4 MFSD8-213ENST00000641134 1327 ntBASIC0.79□□□□□ -2.28
VPS13DQ5THJ4 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
VPS13DQ5THJ4 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
VPS13DQ5THJ4 RPS3AP44-201ENST00000425466 790 ntBASIC0.79□□□□□ -2.28
VPS13DQ5THJ4 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC0.79□□□□□ -2.28
VPS13DQ5THJ4 RPS23P4-201ENST00000487908 423 ntBASIC0.79□□□□□ -2.28
VPS13DQ5THJ4 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC0.79□□□□□ -2.28
VPS13DQ5THJ4 AL445183.3-201ENST00000414168 502 ntBASIC0.79□□□□□ -2.28
VPS13DQ5THJ4 AC092447.6-201ENST00000414578 210 ntBASIC0.79□□□□□ -2.28
VPS13DQ5THJ4 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC0.79□□□□□ -2.28
VPS13DQ5THJ4 AC096632.1-201ENST00000427395 310 ntBASIC0.79□□□□□ -2.28
VPS13DQ5THJ4 AL078601.1-201ENST00000444542 271 ntBASIC0.79□□□□□ -2.28
VPS13DQ5THJ4 AC113155.1-201ENST00000511141 769 ntBASIC0.79□□□□□ -2.28
VPS13DQ5THJ4 Y_RNA.681-201ENST00000516445 113 ntBASIC0.79□□□□□ -2.28
VPS13DQ5THJ4 AC083923.1-201ENST00000523708 376 ntBASIC0.79□□□□□ -2.28
VPS13DQ5THJ4 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC0.79□□□□□ -2.28
VPS13DQ5THJ4 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
VPS13DQ5THJ4 Y_RNA.68-201ENST00000362881 102 ntBASIC0.79□□□□□ -2.28
VPS13DQ5THJ4 RNU4-41P-201ENST00000364426 143 ntBASIC0.79□□□□□ -2.28
VPS13DQ5THJ4 TXNP7-201ENST00000406296 293 ntBASIC0.79□□□□□ -2.28
VPS13DQ5THJ4 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC0.79□□□□□ -2.28
VPS13DQ5THJ4 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC0.79□□□□□ -2.28
VPS13DQ5THJ4 RNU6-1180P-201ENST00000364935 107 ntBASIC0.78□□□□□ -2.28
VPS13DQ5THJ4 RNU4-52P-201ENST00000384209 138 ntBASIC0.78□□□□□ -2.28
VPS13DQ5THJ4 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.78□□□□□ -2.28
VPS13DQ5THJ4 RPS12P24-201ENST00000412619 387 ntBASIC0.78□□□□□ -2.28
VPS13DQ5THJ4 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC0.78□□□□□ -2.28
VPS13DQ5THJ4 BMI1P1-201ENST00000445879 941 ntBASIC0.78□□□□□ -2.28
VPS13DQ5THJ4 AL500527.1-201ENST00000448532 255 ntBASIC0.78□□□□□ -2.28
VPS13DQ5THJ4 AL583843.1-201ENST00000456070 346 ntBASIC0.78□□□□□ -2.28
VPS13DQ5THJ4 AC108078.1-201ENST00000508073 725 ntBASIC0.78□□□□□ -2.28
VPS13DQ5THJ4 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC0.78□□□□□ -2.28
VPS13DQ5THJ4 AC135178.6-201ENST00000605314 398 ntBASIC0.78□□□□□ -2.28
VPS13DQ5THJ4 AL020996.3-201ENST00000606617 222 ntBASIC0.78□□□□□ -2.28
VPS13DQ5THJ4 RNU2-40P-201ENST00000410833 196 ntBASIC0.78□□□□□ -2.28
VPS13DQ5THJ4 RNU6-516P-201ENST00000411381 104 ntBASIC0.78□□□□□ -2.28
VPS13DQ5THJ4 AL022400.1-201ENST00000423946 935 ntBASIC0.78□□□□□ -2.28
VPS13DQ5THJ4 RNU6-1132P-201ENST00000459214 107 ntBASIC0.78□□□□□ -2.28
VPS13DQ5THJ4 RPL31P58-201ENST00000469001 379 ntBASIC0.78□□□□□ -2.28
VPS13DQ5THJ4 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.78□□□□□ -2.28
VPS13DQ5THJ4 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC0.78□□□□□ -2.28
VPS13DQ5THJ4 OR4V1P-201ENST00000525394 1140 ntBASIC0.78□□□□□ -2.28
VPS13DQ5THJ4 HMGB1P24-202ENST00000615653 685 ntBASIC0.78□□□□□ -2.28
VPS13DQ5THJ4 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
VPS13DQ5THJ4 U3.40-201ENST00000408706 208 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms