Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.31□□□□□ -1.56
COL13A1Q5TAT6 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC5.31□□□□□ -1.56
COL13A1Q5TAT6 PCNPP5-201ENST00000452246 481 ntBASIC5.31□□□□□ -1.56
COL13A1Q5TAT6 AC010683.1-201ENST00000473673 378 ntBASIC5.31□□□□□ -1.56
COL13A1Q5TAT6 AC068781.1-201ENST00000488231 618 ntBASIC5.31□□□□□ -1.56
COL13A1Q5TAT6 RPL7P23-201ENST00000493874 747 ntBASIC5.31□□□□□ -1.56
COL13A1Q5TAT6 RPS17P5-201ENST00000498293 408 ntBASIC5.31□□□□□ -1.56
COL13A1Q5TAT6 RNU6-1143P-201ENST00000516125 104 ntBASIC5.31□□□□□ -1.56
COL13A1Q5TAT6 RNA5SP384-201ENST00000516615 116 ntBASIC5.31□□□□□ -1.56
COL13A1Q5TAT6 IFITM8P-201ENST00000522529 394 ntBASIC5.31□□□□□ -1.56
COL13A1Q5TAT6 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
COL13A1Q5TAT6 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.31□□□□□ -1.56
COL13A1Q5TAT6 MIR6130-201ENST00000619419 109 ntBASIC5.31□□□□□ -1.56
COL13A1Q5TAT6 U3.53-201ENST00000628922 216 ntBASIC5.31□□□□□ -1.56
COL13A1Q5TAT6 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL13A1Q5TAT6 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL13A1Q5TAT6 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
COL13A1Q5TAT6 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL13A1Q5TAT6 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL13A1Q5TAT6 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL13A1Q5TAT6 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL13A1Q5TAT6 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.3□□□□□ -1.56
COL13A1Q5TAT6 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.3□□□□□ -1.56
COL13A1Q5TAT6 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.3□□□□□ -1.56
COL13A1Q5TAT6 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.3□□□□□ -1.56
COL13A1Q5TAT6 AC021146.4-201ENST00000309229 279 ntBASIC5.3□□□□□ -1.56
COL13A1Q5TAT6 MIR589-201ENST00000385238 99 ntBASIC5.3□□□□□ -1.56
COL13A1Q5TAT6 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
COL13A1Q5TAT6 MIR1252-201ENST00000408861 65 ntBASIC5.3□□□□□ -1.56
COL13A1Q5TAT6 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC5.3□□□□□ -1.56
COL13A1Q5TAT6 AC011816.1-201ENST00000441346 546 ntBASIC5.3□□□□□ -1.56
COL13A1Q5TAT6 GAPDHP27-201ENST00000447427 1020 ntBASIC5.3□□□□□ -1.56
COL13A1Q5TAT6 RPS24P6-201ENST00000452670 400 ntBASIC5.3□□□□□ -1.56
COL13A1Q5TAT6 RPL21P103-201ENST00000479921 488 ntBASIC5.3□□□□□ -1.56
COL13A1Q5TAT6 RPS27AP13-201ENST00000498403 237 ntBASIC5.3□□□□□ -1.56
COL13A1Q5TAT6 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.3□□□□□ -1.56
COL13A1Q5TAT6 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.3□□□□□ -1.56
COL13A1Q5TAT6 AC131281.1-201ENST00000522984 164 ntBASIC5.3□□□□□ -1.56
COL13A1Q5TAT6 TRAV8-5-201ENST00000537369 341 ntBASIC5.3□□□□□ -1.56
COL13A1Q5TAT6 AL049839.1-201ENST00000556151 657 ntBASIC5.3□□□□□ -1.56
COL13A1Q5TAT6 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.3□□□□□ -1.56
COL13A1Q5TAT6 AC011626.1-201ENST00000604710 562 ntBASIC5.3□□□□□ -1.56
COL13A1Q5TAT6 AC004805.2-201ENST00000605382 482 ntBASIC5.3□□□□□ -1.56
COL13A1Q5TAT6 AL158032.1-201ENST00000605401 106 ntBASIC5.3□□□□□ -1.56
COL13A1Q5TAT6 HMGN2P28-201ENST00000606102 262 ntBASIC5.3□□□□□ -1.56
COL13A1Q5TAT6 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC5.3□□□□□ -1.56
COL13A1Q5TAT6 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.3□□□□□ -1.56
COL13A1Q5TAT6 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
COL13A1Q5TAT6 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.3□□□□□ -1.56
COL13A1Q5TAT6 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
COL13A1Q5TAT6 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
COL13A1Q5TAT6 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
COL13A1Q5TAT6 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL13A1Q5TAT6 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL13A1Q5TAT6 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
COL13A1Q5TAT6 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL13A1Q5TAT6 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL13A1Q5TAT6 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL13A1Q5TAT6 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL13A1Q5TAT6 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL13A1Q5TAT6 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL13A1Q5TAT6 RNU6-450P-201ENST00000364654 107 ntBASIC5.29□□□□□ -1.56
COL13A1Q5TAT6 RNU6-701P-201ENST00000384059 107 ntBASIC5.29□□□□□ -1.56
COL13A1Q5TAT6 Y_RNA.510-201ENST00000384511 114 ntBASIC5.29□□□□□ -1.56
COL13A1Q5TAT6 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
COL13A1Q5TAT6 RPS23P10-201ENST00000416185 486 ntBASIC5.29□□□□□ -1.56
COL13A1Q5TAT6 PGBD4P6-201ENST00000421501 610 ntBASIC5.29□□□□□ -1.56
COL13A1Q5TAT6 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC5.29□□□□□ -1.56
COL13A1Q5TAT6 AC097713.2-201ENST00000430199 356 ntBASIC5.29□□□□□ -1.56
COL13A1Q5TAT6 AC000111.2-201ENST00000448200 210 ntBASIC5.29□□□□□ -1.56
COL13A1Q5TAT6 AC087884.1-201ENST00000469738 328 ntBASIC5.29□□□□□ -1.56
COL13A1Q5TAT6 AC010631.1-201ENST00000474150 156 ntBASIC5.29□□□□□ -1.56
COL13A1Q5TAT6 VN1R104P-201ENST00000505115 1009 ntBASIC5.29□□□□□ -1.56
COL13A1Q5TAT6 RNU1-6P-201ENST00000516290 144 ntBASIC5.29□□□□□ -1.56
COL13A1Q5TAT6 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC5.29□□□□□ -1.56
COL13A1Q5TAT6 HSBP1P1-201ENST00000555205 166 ntBASIC5.29□□□□□ -1.56
COL13A1Q5TAT6 AL137843.1-201ENST00000605078 385 ntBASIC5.29□□□□□ -1.56
COL13A1Q5TAT6 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL13A1Q5TAT6 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
COL13A1Q5TAT6 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC5.29□□□□□ -1.56
COL13A1Q5TAT6 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL13A1Q5TAT6 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.29□□□□□ -1.56
COL13A1Q5TAT6 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL13A1Q5TAT6 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.28□□□□□ -1.56
COL13A1Q5TAT6 MTND5P27-201ENST00000428871 1720 ntBASIC5.28□□□□□ -1.56
COL13A1Q5TAT6 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
COL13A1Q5TAT6 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.28□□□□□ -1.56
COL13A1Q5TAT6 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.28□□□□□ -1.56
COL13A1Q5TAT6 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.28□□□□□ -1.56
COL13A1Q5TAT6 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.28□□□□□ -1.56
COL13A1Q5TAT6 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
COL13A1Q5TAT6 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL13A1Q5TAT6 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL13A1Q5TAT6 RNU6-209P-201ENST00000384118 107 ntBASIC5.28□□□□□ -1.56
COL13A1Q5TAT6 RNU6-190P-201ENST00000384154 102 ntBASIC5.28□□□□□ -1.56
COL13A1Q5TAT6 Y_RNA.480-201ENST00000384364 102 ntBASIC5.28□□□□□ -1.56
COL13A1Q5TAT6 RN7SKP17-201ENST00000411242 351 ntBASIC5.28□□□□□ -1.56
COL13A1Q5TAT6 AP000907.1-201ENST00000428428 510 ntBASIC5.28□□□□□ -1.56
COL13A1Q5TAT6 RPL12P18-201ENST00000437175 325 ntBASIC5.28□□□□□ -1.56
COL13A1Q5TAT6 AC073910.1-201ENST00000445047 438 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms