Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 AC093270.2-201ENST00000486157 792 ntBASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 NDUFB5P1-201ENST00000508134 564 ntBASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 RNU6-914P-201ENST00000516749 109 ntBASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 SUMO2P18-201ENST00000518873 252 ntBASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 AC103783.1-201ENST00000520506 373 ntBASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 EDDM3DP-201ENST00000554692 434 ntBASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 AC008749.1-201ENST00000597650 306 ntBASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 AC005828.6-201ENST00000606610 232 ntBASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 AC004656.1-201ENST00000568479 4951 ntBASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
RNFT1Q5M7Z0 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RNFT1Q5M7Z0 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.03□□□□□ -1.6
RNFT1Q5M7Z0 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RNFT1Q5M7Z0 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
RNFT1Q5M7Z0 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNFT1Q5M7Z0 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.03□□□□□ -1.6
RNFT1Q5M7Z0 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNFT1Q5M7Z0 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
RNFT1Q5M7Z0 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNFT1Q5M7Z0 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
RNFT1Q5M7Z0 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.03□□□□□ -1.6
RNFT1Q5M7Z0 U3.6-201ENST00000363622 211 ntBASIC5.03□□□□□ -1.6
RNFT1Q5M7Z0 RNU6-926P-201ENST00000384075 107 ntBASIC5.03□□□□□ -1.6
RNFT1Q5M7Z0 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RNFT1Q5M7Z0 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.03□□□□□ -1.6
RNFT1Q5M7Z0 RN7SL172P-201ENST00000460535 303 ntBASIC5.03□□□□□ -1.6
RNFT1Q5M7Z0 RPL23AP2-201ENST00000471227 466 ntBASIC5.03□□□□□ -1.6
RNFT1Q5M7Z0 AC072052.1-201ENST00000496556 306 ntBASIC5.03□□□□□ -1.6
RNFT1Q5M7Z0 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.03□□□□□ -1.6
RNFT1Q5M7Z0 HMGB3P3-201ENST00000510526 400 ntBASIC5.03□□□□□ -1.6
RNFT1Q5M7Z0 RN7SKP258-201ENST00000517151 304 ntBASIC5.03□□□□□ -1.6
RNFT1Q5M7Z0 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.03□□□□□ -1.6
RNFT1Q5M7Z0 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.03□□□□□ -1.6
RNFT1Q5M7Z0 RPL23AP87-202ENST00000573039 466 ntBASIC5.03□□□□□ -1.6
RNFT1Q5M7Z0 AL133481.2-203ENST00000607558 139 ntBASIC5.03□□□□□ -1.6
RNFT1Q5M7Z0 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNFT1Q5M7Z0 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RNFT1Q5M7Z0 AC079776.5-201ENST00000641920 211 ntBASIC5.03□□□□□ -1.6
RNFT1Q5M7Z0 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RNFT1Q5M7Z0 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNFT1Q5M7Z0 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.03□□□□□ -1.6
RNFT1Q5M7Z0 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RNFT1Q5M7Z0 AC135776.4-201ENST00000624300 1904 ntBASIC5.03□□□□□ -1.6
RNFT1Q5M7Z0 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RNFT1Q5M7Z0 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNFT1Q5M7Z0 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNFT1Q5M7Z0 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 AL355834.1-201ENST00000556602 3965 ntBASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 RNA5SP326-201ENST00000363209 110 ntBASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 RNU6-147P-201ENST00000383983 107 ntBASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 SNORA70-201ENST00000384436 135 ntBASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 MIR223-201ENST00000385204 110 ntBASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 RPL23AP17-201ENST00000401064 499 ntBASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 AL022722.2-201ENST00000402519 180 ntBASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 RNA5SP89-201ENST00000410300 108 ntBASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 AC063979.1-201ENST00000415539 377 ntBASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 AF186996.5-201ENST00000418098 904 ntBASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 RPL12P39-201ENST00000455456 496 ntBASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 snoU13.7-201ENST00000459220 104 ntBASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 ATP5F1P5-201ENST00000526403 760 ntBASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 BPIFA4P-203ENST00000603168 689 ntBASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 AL034351.1-201ENST00000605288 668 ntBASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 MIR6130-201ENST00000619419 109 ntBASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNFT1Q5M7Z0 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms