Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 MIR3158-1-201ENST00000583596 81 ntBASIC3.31□□□□□ -1.88
EFNB3Q15768 AC006504.3-201ENST00000586818 523 ntBASIC3.31□□□□□ -1.88
EFNB3Q15768 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.31□□□□□ -1.88
EFNB3Q15768 AC025449.1-201ENST00000603896 529 ntBASIC3.31□□□□□ -1.88
EFNB3Q15768 AC128687.2-201ENST00000609657 566 ntBASIC3.31□□□□□ -1.88
EFNB3Q15768 AC006133.1-201ENST00000617106 264 ntBASIC3.31□□□□□ -1.88
EFNB3Q15768 AC110801.1-201ENST00000623590 212 ntBASIC3.31□□□□□ -1.88
EFNB3Q15768 MIR1321-201ENST00000637766 79 ntBASIC3.31□□□□□ -1.88
EFNB3Q15768 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
EFNB3Q15768 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.31□□□□□ -1.88
EFNB3Q15768 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.31□□□□□ -1.88
EFNB3Q15768 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
EFNB3Q15768 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
EFNB3Q15768 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.3□□□□□ -1.88
EFNB3Q15768 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
EFNB3Q15768 Y_RNA.22-201ENST00000362492 102 ntBASIC3.3□□□□□ -1.88
EFNB3Q15768 RNU6-960P-201ENST00000364056 120 ntBASIC3.3□□□□□ -1.88
EFNB3Q15768 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
EFNB3Q15768 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
EFNB3Q15768 RNU6-606P-201ENST00000384721 111 ntBASIC3.3□□□□□ -1.88
EFNB3Q15768 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
EFNB3Q15768 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
EFNB3Q15768 RNU6-780P-201ENST00000391030 104 ntBASIC3.3□□□□□ -1.88
EFNB3Q15768 MTHFD2P2-201ENST00000407725 247 ntBASIC3.3□□□□□ -1.88
EFNB3Q15768 MIR1277-201ENST00000408536 78 ntBASIC3.3□□□□□ -1.88
EFNB3Q15768 RNU2-39P-201ENST00000410604 198 ntBASIC3.3□□□□□ -1.88
EFNB3Q15768 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
EFNB3Q15768 AC007390.1-201ENST00000415722 356 ntBASIC3.3□□□□□ -1.88
EFNB3Q15768 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
EFNB3Q15768 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.3□□□□□ -1.88
EFNB3Q15768 RAC1P6-201ENST00000423911 575 ntBASIC3.3□□□□□ -1.88
EFNB3Q15768 AL591419.1-201ENST00000427423 339 ntBASIC3.3□□□□□ -1.88
EFNB3Q15768 ELOCP14-201ENST00000428070 331 ntBASIC3.3□□□□□ -1.88
EFNB3Q15768 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
EFNB3Q15768 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
EFNB3Q15768 ELOCP7-201ENST00000439968 331 ntBASIC3.3□□□□□ -1.88
EFNB3Q15768 MTCO2P3-201ENST00000442543 421 ntBASIC3.3□□□□□ -1.88
EFNB3Q15768 DDX3P2-201ENST00000446138 111 ntBASIC3.3□□□□□ -1.88
EFNB3Q15768 AL500522.2-201ENST00000448562 343 ntBASIC3.3□□□□□ -1.88
EFNB3Q15768 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.3□□□□□ -1.88
EFNB3Q15768 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.3□□□□□ -1.88
EFNB3Q15768 RPL23AP31-201ENST00000456160 467 ntBASIC3.3□□□□□ -1.88
EFNB3Q15768 RNU7-170P-201ENST00000459303 61 ntBASIC3.3□□□□□ -1.88
EFNB3Q15768 AC126389.1-201ENST00000477436 290 ntBASIC3.3□□□□□ -1.88
EFNB3Q15768 RN7SL432P-201ENST00000484057 298 ntBASIC3.3□□□□□ -1.88
EFNB3Q15768 AC108860.1-201ENST00000484521 383 ntBASIC3.3□□□□□ -1.88
EFNB3Q15768 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.3□□□□□ -1.88
EFNB3Q15768 AC069499.1-201ENST00000489433 509 ntBASIC3.3□□□□□ -1.88
EFNB3Q15768 HSPD1P15-201ENST00000505573 1122 ntBASIC3.3□□□□□ -1.88
EFNB3Q15768 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.3□□□□□ -1.88
EFNB3Q15768 RNU6-352P-201ENST00000516908 107 ntBASIC3.3□□□□□ -1.88
EFNB3Q15768 RNU6-1092P-201ENST00000516955 87 ntBASIC3.3□□□□□ -1.88
EFNB3Q15768 AC104383.1-201ENST00000530297 370 ntBASIC3.3□□□□□ -1.88
EFNB3Q15768 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.3□□□□□ -1.88
EFNB3Q15768 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.3□□□□□ -1.88
EFNB3Q15768 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.3□□□□□ -1.88
EFNB3Q15768 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.3□□□□□ -1.88
EFNB3Q15768 AC007621.1-201ENST00000604544 437 ntBASIC3.3□□□□□ -1.88
EFNB3Q15768 HMGB1P50-201ENST00000605814 607 ntBASIC3.3□□□□□ -1.88
EFNB3Q15768 AL355810.1-201ENST00000614629 552 ntBASIC3.3□□□□□ -1.88
EFNB3Q15768 SDR42E1P2-201ENST00000614861 481 ntBASIC3.3□□□□□ -1.88
EFNB3Q15768 AC007014.2-201ENST00000615581 479 ntBASIC3.3□□□□□ -1.88
EFNB3Q15768 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.3□□□□□ -1.88
EFNB3Q15768 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.3□□□□□ -1.88
EFNB3Q15768 AL591424.2-201ENST00000617023 128 ntBASIC3.3□□□□□ -1.88
EFNB3Q15768 AC039056.2-201ENST00000622261 511 ntBASIC3.3□□□□□ -1.88
EFNB3Q15768 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.3□□□□□ -1.88
EFNB3Q15768 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.3□□□□□ -1.88
EFNB3Q15768 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
EFNB3Q15768 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
EFNB3Q15768 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.29□□□□□ -1.88
EFNB3Q15768 ZNF680P1-201ENST00000436625 1469 ntBASIC3.29□□□□□ -1.88
EFNB3Q15768 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.29□□□□□ -1.88
EFNB3Q15768 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
EFNB3Q15768 DEFB108F-201ENST00000344638 222 ntBASIC3.29□□□□□ -1.88
EFNB3Q15768 AL359837.1-201ENST00000381357 287 ntBASIC3.29□□□□□ -1.88
EFNB3Q15768 Y_RNA.453-201ENST00000384223 109 ntBASIC3.29□□□□□ -1.88
EFNB3Q15768 MIR1-2-201ENST00000384961 85 ntBASIC3.29□□□□□ -1.88
EFNB3Q15768 AL138878.1-201ENST00000405131 347 ntBASIC3.29□□□□□ -1.88
EFNB3Q15768 USP9YP27-201ENST00000418455 438 ntBASIC3.29□□□□□ -1.88
EFNB3Q15768 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.29□□□□□ -1.88
EFNB3Q15768 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.29□□□□□ -1.88
EFNB3Q15768 RPL21P66-201ENST00000426566 466 ntBASIC3.29□□□□□ -1.88
EFNB3Q15768 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.29□□□□□ -1.88
EFNB3Q15768 AC011742.1-201ENST00000431448 434 ntBASIC3.29□□□□□ -1.88
EFNB3Q15768 AL596276.1-201ENST00000434465 418 ntBASIC3.29□□□□□ -1.88
EFNB3Q15768 HMGB3P12-201ENST00000438745 556 ntBASIC3.29□□□□□ -1.88
EFNB3Q15768 AL356535.1-201ENST00000440335 398 ntBASIC3.29□□□□□ -1.88
EFNB3Q15768 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.29□□□□□ -1.88
EFNB3Q15768 GAPDHP27-201ENST00000447427 1020 ntBASIC3.29□□□□□ -1.88
EFNB3Q15768 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.29□□□□□ -1.88
EFNB3Q15768 AL133162.1-201ENST00000463228 453 ntBASIC3.29□□□□□ -1.88
EFNB3Q15768 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
EFNB3Q15768 AL049830.2-201ENST00000480072 201 ntBASIC3.29□□□□□ -1.88
EFNB3Q15768 RPL36AP51-201ENST00000487216 318 ntBASIC3.29□□□□□ -1.88
EFNB3Q15768 NIPA2P2-201ENST00000496376 1083 ntBASIC3.29□□□□□ -1.88
EFNB3Q15768 GMPSP1-201ENST00000514075 579 ntBASIC3.29□□□□□ -1.88
EFNB3Q15768 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.29□□□□□ -1.88
EFNB3Q15768 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.29□□□□□ -1.88
EFNB3Q15768 RNU6-390P-201ENST00000516259 103 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms