Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 SNORA77-201ENST00000408716 125 ntBASIC4.88□□□□□ -1.63
PCDH1Q08174 RNU6-325P-201ENST00000411132 105 ntBASIC4.88□□□□□ -1.63
PCDH1Q08174 RNU4-61P-201ENST00000411243 107 ntBASIC4.88□□□□□ -1.63
PCDH1Q08174 AL353621.1-201ENST00000418219 243 ntBASIC4.88□□□□□ -1.63
PCDH1Q08174 ELOCP20-201ENST00000422460 345 ntBASIC4.88□□□□□ -1.63
PCDH1Q08174 CKS1BP5-201ENST00000434172 273 ntBASIC4.88□□□□□ -1.63
PCDH1Q08174 MTND2P29-201ENST00000438595 412 ntBASIC4.88□□□□□ -1.63
PCDH1Q08174 AL354714.3-201ENST00000447284 493 ntBASIC4.88□□□□□ -1.63
PCDH1Q08174 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.88□□□□□ -1.63
PCDH1Q08174 RN7SL517P-201ENST00000462240 305 ntBASIC4.88□□□□□ -1.63
PCDH1Q08174 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC4.88□□□□□ -1.63
PCDH1Q08174 AC113155.1-201ENST00000511141 769 ntBASIC4.88□□□□□ -1.63
PCDH1Q08174 SNORA25.11-201ENST00000515935 105 ntBASIC4.88□□□□□ -1.63
PCDH1Q08174 RNA5SP34-201ENST00000516887 130 ntBASIC4.88□□□□□ -1.63
PCDH1Q08174 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.88□□□□□ -1.63
PCDH1Q08174 MIR3128-201ENST00000581957 66 ntBASIC4.88□□□□□ -1.63
PCDH1Q08174 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
PCDH1Q08174 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.88□□□□□ -1.63
PCDH1Q08174 U6.104-201ENST00000637979 90 ntBASIC4.88□□□□□ -1.63
PCDH1Q08174 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.88□□□□□ -1.63
PCDH1Q08174 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDH1Q08174 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PCDH1Q08174 PABPC1P6-201ENST00000445594 1829 ntBASIC4.88□□□□□ -1.63
PCDH1Q08174 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PCDH1Q08174 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDH1Q08174 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.87□□□□□ -1.63
PCDH1Q08174 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
PCDH1Q08174 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PCDH1Q08174 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PCDH1Q08174 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDH1Q08174 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDH1Q08174 AC008079.2-201ENST00000623543 20396 ntBASIC4.87□□□□□ -1.63
PCDH1Q08174 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
PCDH1Q08174 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDH1Q08174 OR56A5-201ENST00000340110 738 ntBASIC4.87□□□□□ -1.63
PCDH1Q08174 RN7SKP115-201ENST00000363177 317 ntBASIC4.87□□□□□ -1.63
PCDH1Q08174 Y_RNA.376-201ENST00000365638 108 ntBASIC4.87□□□□□ -1.63
PCDH1Q08174 MIR1178-201ENST00000408396 91 ntBASIC4.87□□□□□ -1.63
PCDH1Q08174 MIR1271-201ENST00000408537 86 ntBASIC4.87□□□□□ -1.63
PCDH1Q08174 RNU4-34P-201ENST00000410431 124 ntBASIC4.87□□□□□ -1.63
PCDH1Q08174 RNU2-38P-201ENST00000410856 79 ntBASIC4.87□□□□□ -1.63
PCDH1Q08174 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.87□□□□□ -1.63
PCDH1Q08174 BX510359.3-201ENST00000422168 306 ntBASIC4.87□□□□□ -1.63
PCDH1Q08174 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.87□□□□□ -1.63
PCDH1Q08174 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.87□□□□□ -1.63
PCDH1Q08174 AC092647.2-201ENST00000452998 253 ntBASIC4.87□□□□□ -1.63
PCDH1Q08174 RNA5SP103-201ENST00000459503 118 ntBASIC4.87□□□□□ -1.63
PCDH1Q08174 RPS15AP34-201ENST00000487776 387 ntBASIC4.87□□□□□ -1.63
PCDH1Q08174 AC072052.1-201ENST00000496556 306 ntBASIC4.87□□□□□ -1.63
PCDH1Q08174 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.87□□□□□ -1.63
PCDH1Q08174 AC008716.1-201ENST00000511084 513 ntBASIC4.87□□□□□ -1.63
PCDH1Q08174 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.87□□□□□ -1.63
PCDH1Q08174 Y_RNA.687-201ENST00000516558 91 ntBASIC4.87□□□□□ -1.63
PCDH1Q08174 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.87□□□□□ -1.63
PCDH1Q08174 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
PCDH1Q08174 HSPE1P20-201ENST00000538133 289 ntBASIC4.87□□□□□ -1.63
PCDH1Q08174 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.87□□□□□ -1.63
PCDH1Q08174 RAC1P9-201ENST00000604990 392 ntBASIC4.87□□□□□ -1.63
PCDH1Q08174 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.87□□□□□ -1.63
PCDH1Q08174 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PCDH1Q08174 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDH1Q08174 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDH1Q08174 DHX9P1-201ENST00000436565 3076 ntBASIC4.87□□□□□ -1.63
PCDH1Q08174 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PCDH1Q08174 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.87□□□□□ -1.63
PCDH1Q08174 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDH1Q08174 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PCDH1Q08174 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDH1Q08174 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDH1Q08174 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
PCDH1Q08174 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
PCDH1Q08174 AL022322.2-201ENST00000624072 20397 ntBASIC4.86□□□□□ -1.63
PCDH1Q08174 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDH1Q08174 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.86□□□□□ -1.63
PCDH1Q08174 Y_RNA.14-201ENST00000362415 103 ntBASIC4.86□□□□□ -1.63
PCDH1Q08174 Y_RNA.60-201ENST00000362831 98 ntBASIC4.86□□□□□ -1.63
PCDH1Q08174 Y_RNA.324-201ENST00000365165 102 ntBASIC4.86□□□□□ -1.63
PCDH1Q08174 MIR625-201ENST00000385047 85 ntBASIC4.86□□□□□ -1.63
PCDH1Q08174 U3.36-201ENST00000408418 213 ntBASIC4.86□□□□□ -1.63
PCDH1Q08174 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.86□□□□□ -1.63
PCDH1Q08174 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.86□□□□□ -1.63
PCDH1Q08174 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.86□□□□□ -1.63
PCDH1Q08174 AC006946.1-201ENST00000429106 328 ntBASIC4.86□□□□□ -1.63
PCDH1Q08174 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.86□□□□□ -1.63
PCDH1Q08174 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.86□□□□□ -1.63
PCDH1Q08174 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.86□□□□□ -1.63
PCDH1Q08174 RPS3AP46-201ENST00000448352 682 ntBASIC4.86□□□□□ -1.63
PCDH1Q08174 OR2AQ1P-201ENST00000451972 200 ntBASIC4.86□□□□□ -1.63
PCDH1Q08174 CEACAMP6-201ENST00000452007 574 ntBASIC4.86□□□□□ -1.63
PCDH1Q08174 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.86□□□□□ -1.63
PCDH1Q08174 RNU6-1023P-201ENST00000516137 106 ntBASIC4.86□□□□□ -1.63
PCDH1Q08174 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.86□□□□□ -1.63
PCDH1Q08174 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.86□□□□□ -1.63
PCDH1Q08174 TRAV32-201ENST00000553993 340 ntBASIC4.86□□□□□ -1.63
PCDH1Q08174 AC007375.1-201ENST00000554513 578 ntBASIC4.86□□□□□ -1.63
PCDH1Q08174 AL161713.1-201ENST00000555538 145 ntBASIC4.86□□□□□ -1.63
PCDH1Q08174 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.86□□□□□ -1.63
PCDH1Q08174 VN1R91P-201ENST00000594377 169 ntBASIC4.86□□□□□ -1.63
PCDH1Q08174 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4.86□□□□□ -1.63
PCDH1Q08174 AC034102.8-201ENST00000615146 484 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms