Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AL353743.1-202ENST00000431724 1695 ntBASIC3□□□□□ -1.93
SCN1BQ07699 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3□□□□□ -1.93
SCN1BQ07699 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3□□□□□ -1.93
SCN1BQ07699 AC093831.2-201ENST00000624393 3427 ntBASIC3□□□□□ -1.93
SCN1BQ07699 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SCN1BQ07699 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.99□□□□□ -1.93
SCN1BQ07699 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.99□□□□□ -1.93
SCN1BQ07699 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC2.99□□□□□ -1.93
SCN1BQ07699 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SCN1BQ07699 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
SCN1BQ07699 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SCN1BQ07699 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SCN1BQ07699 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
SCN1BQ07699 RNU6-193P-201ENST00000410977 107 ntBASIC2.99□□□□□ -1.93
SCN1BQ07699 USP9YP13-201ENST00000417797 480 ntBASIC2.99□□□□□ -1.93
SCN1BQ07699 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.99□□□□□ -1.93
SCN1BQ07699 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.99□□□□□ -1.93
SCN1BQ07699 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.99□□□□□ -1.93
SCN1BQ07699 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.99□□□□□ -1.93
SCN1BQ07699 EPS15P1-201ENST00000448836 336 ntBASIC2.99□□□□□ -1.93
SCN1BQ07699 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.99□□□□□ -1.93
SCN1BQ07699 RN7SL75P-201ENST00000461926 281 ntBASIC2.99□□□□□ -1.93
SCN1BQ07699 AC009901.1-201ENST00000506703 541 ntBASIC2.99□□□□□ -1.93
SCN1BQ07699 MRPS33P3-201ENST00000513456 322 ntBASIC2.99□□□□□ -1.93
SCN1BQ07699 AC026402.1-201ENST00000513642 170 ntBASIC2.99□□□□□ -1.93
SCN1BQ07699 RNU6-56P-201ENST00000516986 93 ntBASIC2.99□□□□□ -1.93
SCN1BQ07699 RNU6-232P-201ENST00000517144 64 ntBASIC2.99□□□□□ -1.93
SCN1BQ07699 AC107934.1-201ENST00000522215 217 ntBASIC2.99□□□□□ -1.93
SCN1BQ07699 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SCN1BQ07699 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SCN1BQ07699 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC2.99□□□□□ -1.93
SCN1BQ07699 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
SCN1BQ07699 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.99□□□□□ -1.93
SCN1BQ07699 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.99□□□□□ -1.93
SCN1BQ07699 AC010546.1-201ENST00000569391 485 ntBASIC2.99□□□□□ -1.93
SCN1BQ07699 RPL23AP78-201ENST00000599928 470 ntBASIC2.99□□□□□ -1.93
SCN1BQ07699 AL355877.2-201ENST00000603670 358 ntBASIC2.99□□□□□ -1.93
SCN1BQ07699 AC007619.2-201ENST00000605743 379 ntBASIC2.99□□□□□ -1.93
SCN1BQ07699 AL355816.2-201ENST00000610049 647 ntBASIC2.99□□□□□ -1.93
SCN1BQ07699 AC034102.8-201ENST00000615146 484 ntBASIC2.99□□□□□ -1.93
SCN1BQ07699 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.99□□□□□ -1.93
SCN1BQ07699 uc_338.12-201ENST00000616344 181 ntBASIC2.99□□□□□ -1.93
SCN1BQ07699 AC006338.1-201ENST00000618453 749 ntBASIC2.99□□□□□ -1.93
SCN1BQ07699 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.99□□□□□ -1.93
SCN1BQ07699 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.99□□□□□ -1.93
SCN1BQ07699 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SCN1BQ07699 MFSD8-233ENST00000641482 4860 ntBASIC2.99□□□□□ -1.93
SCN1BQ07699 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
SCN1BQ07699 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.99□□□□□ -1.93
SCN1BQ07699 MTND5P29-201ENST00000458676 1807 ntBASIC2.98□□□□□ -1.93
SCN1BQ07699 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SCN1BQ07699 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SCN1BQ07699 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.98□□□□□ -1.93
SCN1BQ07699 UBE2L2-201ENST00000254302 429 ntBASIC2.98□□□□□ -1.93
SCN1BQ07699 RNU6-512P-201ENST00000364438 103 ntBASIC2.98□□□□□ -1.93
SCN1BQ07699 RNA5SP51-201ENST00000364750 119 ntBASIC2.98□□□□□ -1.93
SCN1BQ07699 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SCN1BQ07699 AL359837.1-201ENST00000381357 287 ntBASIC2.98□□□□□ -1.93
SCN1BQ07699 Y_RNA.560-201ENST00000384689 102 ntBASIC2.98□□□□□ -1.93
SCN1BQ07699 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.98□□□□□ -1.93
SCN1BQ07699 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.98□□□□□ -1.93
SCN1BQ07699 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.98□□□□□ -1.93
SCN1BQ07699 AC104651.1-201ENST00000427559 735 ntBASIC2.98□□□□□ -1.93
SCN1BQ07699 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.98□□□□□ -1.93
SCN1BQ07699 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.98□□□□□ -1.93
SCN1BQ07699 HMGB1P27-201ENST00000431429 603 ntBASIC2.98□□□□□ -1.93
SCN1BQ07699 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.98□□□□□ -1.93
SCN1BQ07699 AL590365.1-201ENST00000450788 243 ntBASIC2.98□□□□□ -1.93
SCN1BQ07699 SUN3-208ENST00000453192 801 ntTSL 5 BASIC2.98□□□□□ -1.93
SCN1BQ07699 SSXP1-201ENST00000453640 473 ntBASIC2.98□□□□□ -1.93
SCN1BQ07699 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.98□□□□□ -1.93
SCN1BQ07699 BZW1P2-201ENST00000473537 826 ntBASIC2.98□□□□□ -1.93
SCN1BQ07699 RBM43P1-201ENST00000476891 1081 ntBASIC2.98□□□□□ -1.93
SCN1BQ07699 MRPS36P2-201ENST00000512569 299 ntBASIC2.98□□□□□ -1.93
SCN1BQ07699 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.98□□□□□ -1.93
SCN1BQ07699 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.98□□□□□ -1.93
SCN1BQ07699 SNORA70.18-201ENST00000516696 98 ntBASIC2.98□□□□□ -1.93
SCN1BQ07699 RNU6-759P-201ENST00000516740 103 ntBASIC2.98□□□□□ -1.93
SCN1BQ07699 RNA5SP165-201ENST00000517142 115 ntBASIC2.98□□□□□ -1.93
SCN1BQ07699 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.98□□□□□ -1.93
SCN1BQ07699 AC022634.1-201ENST00000520765 532 ntBASIC2.98□□□□□ -1.93
SCN1BQ07699 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.98□□□□□ -1.93
SCN1BQ07699 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.98□□□□□ -1.93
SCN1BQ07699 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.98□□□□□ -1.93
SCN1BQ07699 AP006587.4-201ENST00000526053 529 ntBASIC2.98□□□□□ -1.93
SCN1BQ07699 ARL2BPP2-201ENST00000550907 489 ntBASIC2.98□□□□□ -1.93
SCN1BQ07699 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.98□□□□□ -1.93
SCN1BQ07699 AL359212.1-201ENST00000556608 614 ntBASIC2.98□□□□□ -1.93
SCN1BQ07699 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.98□□□□□ -1.93
SCN1BQ07699 MIR5697-201ENST00000578045 78 ntBASIC2.98□□□□□ -1.93
SCN1BQ07699 MIR4697-201ENST00000582977 78 ntBASIC2.98□□□□□ -1.93
SCN1BQ07699 AC024220.1-201ENST00000603675 484 ntBASIC2.98□□□□□ -1.93
SCN1BQ07699 Z99289.3-201ENST00000605586 594 ntBASIC2.98□□□□□ -1.93
SCN1BQ07699 AC104010.1-201ENST00000616889 150 ntBASIC2.98□□□□□ -1.93
SCN1BQ07699 MIR6810-201ENST00000622701 70 ntBASIC2.98□□□□□ -1.93
SCN1BQ07699 AC079248.2-201ENST00000623779 326 ntBASIC2.98□□□□□ -1.93
SCN1BQ07699 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.98□□□□□ -1.93
SCN1BQ07699 AC092104.1-201ENST00000497346 1441 ntBASIC2.98□□□□□ -1.93
SCN1BQ07699 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
SCN1BQ07699 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 193.4 ms