Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.96□□□□□ -1.62
SOX4Q06945 CEACAMP1-201ENST00000434624 1035 ntBASIC4.96□□□□□ -1.62
SOX4Q06945 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.96□□□□□ -1.62
SOX4Q06945 AL162389.1-201ENST00000449233 177 ntBASIC4.96□□□□□ -1.62
SOX4Q06945 AC234775.1-201ENST00000454247 670 ntBASIC4.96□□□□□ -1.62
SOX4Q06945 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.96□□□□□ -1.62
SOX4Q06945 AC022447.4-201ENST00000504053 364 ntBASIC4.96□□□□□ -1.62
SOX4Q06945 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.96□□□□□ -1.62
SOX4Q06945 SNORA40.14-201ENST00000516543 86 ntBASIC4.96□□□□□ -1.62
SOX4Q06945 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.96□□□□□ -1.62
SOX4Q06945 AC007991.1-201ENST00000522680 631 ntBASIC4.96□□□□□ -1.62
SOX4Q06945 CR383656.7-201ENST00000548164 174 ntBASIC4.96□□□□□ -1.62
SOX4Q06945 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.96□□□□□ -1.62
SOX4Q06945 AC109446.1-201ENST00000566172 220 ntBASIC4.96□□□□□ -1.62
SOX4Q06945 MIR4277-201ENST00000578298 84 ntBASIC4.96□□□□□ -1.62
SOX4Q06945 MIR5188-201ENST00000583467 113 ntBASIC4.96□□□□□ -1.62
SOX4Q06945 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.96□□□□□ -1.62
SOX4Q06945 AC174048.1-201ENST00000603389 144 ntBASIC4.96□□□□□ -1.62
SOX4Q06945 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.96□□□□□ -1.62
SOX4Q06945 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.96□□□□□ -1.62
SOX4Q06945 AC006329.2-201ENST00000611491 394 ntBASIC4.96□□□□□ -1.62
SOX4Q06945 AL138825.1-201ENST00000618587 192 ntBASIC4.96□□□□□ -1.62
SOX4Q06945 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.96□□□□□ -1.62
SOX4Q06945 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SOX4Q06945 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.96□□□□□ -1.62
SOX4Q06945 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.96□□□□□ -1.62
SOX4Q06945 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SOX4Q06945 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SOX4Q06945 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
SOX4Q06945 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.95□□□□□ -1.62
SOX4Q06945 DDX10P1-201ENST00000448545 1933 ntBASIC4.95□□□□□ -1.62
SOX4Q06945 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.95□□□□□ -1.62
SOX4Q06945 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.95□□□□□ -1.62
SOX4Q06945 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.95□□□□□ -1.62
SOX4Q06945 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SOX4Q06945 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
SOX4Q06945 IQCB2P-201ENST00000401788 1633 ntBASIC4.95□□□□□ -1.62
SOX4Q06945 AL391684.1-202ENST00000641293 1636 ntBASIC4.95□□□□□ -1.62
SOX4Q06945 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SOX4Q06945 AC138393.1-203ENST00000327086 343 ntBASIC4.95□□□□□ -1.62
SOX4Q06945 OR56A5-201ENST00000340110 738 ntBASIC4.95□□□□□ -1.62
SOX4Q06945 ENSAP1-201ENST00000392855 326 ntBASIC4.95□□□□□ -1.62
SOX4Q06945 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SOX4Q06945 ELOCP20-201ENST00000422460 345 ntBASIC4.95□□□□□ -1.62
SOX4Q06945 RBMY1KP-201ENST00000423480 476 ntBASIC4.95□□□□□ -1.62
SOX4Q06945 RPL30P3-201ENST00000424262 333 ntBASIC4.95□□□□□ -1.62
SOX4Q06945 C4BPAP2-201ENST00000428434 478 ntBASIC4.95□□□□□ -1.62
SOX4Q06945 RPL23AP33-201ENST00000442301 452 ntBASIC4.95□□□□□ -1.62
SOX4Q06945 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.95□□□□□ -1.62
SOX4Q06945 AC239809.1-201ENST00000450470 217 ntBASIC4.95□□□□□ -1.62
SOX4Q06945 AC011005.2-201ENST00000487324 359 ntBASIC4.95□□□□□ -1.62
SOX4Q06945 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.95□□□□□ -1.62
SOX4Q06945 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.95□□□□□ -1.62
SOX4Q06945 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.95□□□□□ -1.62
SOX4Q06945 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.95□□□□□ -1.62
SOX4Q06945 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.95□□□□□ -1.62
SOX4Q06945 AC009643.1-201ENST00000532030 391 ntBASIC4.95□□□□□ -1.62
SOX4Q06945 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SOX4Q06945 HSPE1P20-201ENST00000538133 289 ntBASIC4.95□□□□□ -1.62
SOX4Q06945 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.95□□□□□ -1.62
SOX4Q06945 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.95□□□□□ -1.62
SOX4Q06945 AL137100.2-201ENST00000555786 315 ntBASIC4.95□□□□□ -1.62
SOX4Q06945 AL031176.1-201ENST00000604554 466 ntBASIC4.95□□□□□ -1.62
SOX4Q06945 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.95□□□□□ -1.62
SOX4Q06945 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SOX4Q06945 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SOX4Q06945 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
SOX4Q06945 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SOX4Q06945 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.95□□□□□ -1.62
SOX4Q06945 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.94□□□□□ -1.62
SOX4Q06945 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SOX4Q06945 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.94□□□□□ -1.62
SOX4Q06945 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
SOX4Q06945 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SOX4Q06945 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SOX4Q06945 AC108032.1-201ENST00000416706 207 ntBASIC4.94□□□□□ -1.62
SOX4Q06945 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.94□□□□□ -1.62
SOX4Q06945 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.94□□□□□ -1.62
SOX4Q06945 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.94□□□□□ -1.62
SOX4Q06945 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.94□□□□□ -1.62
SOX4Q06945 MTND5P15-201ENST00000434246 349 ntBASIC4.94□□□□□ -1.62
SOX4Q06945 RPL23AP93-201ENST00000440847 484 ntBASIC4.94□□□□□ -1.62
SOX4Q06945 TDGF1P1-201ENST00000445734 527 ntBASIC4.94□□□□□ -1.62
SOX4Q06945 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.94□□□□□ -1.62
SOX4Q06945 AL162591.2-201ENST00000449634 317 ntBASIC4.94□□□□□ -1.62
SOX4Q06945 RPL10P17-201ENST00000453852 316 ntBASIC4.94□□□□□ -1.62
SOX4Q06945 snoU109.4-201ENST00000458953 143 ntBASIC4.94□□□□□ -1.62
SOX4Q06945 RPL39P38-201ENST00000467018 153 ntBASIC4.94□□□□□ -1.62
SOX4Q06945 AP000926.1-201ENST00000479573 241 ntBASIC4.94□□□□□ -1.62
SOX4Q06945 RPL17P19-201ENST00000489069 552 ntBASIC4.94□□□□□ -1.62
SOX4Q06945 GZMAP1-201ENST00000503054 631 ntBASIC4.94□□□□□ -1.62
SOX4Q06945 AC083829.1-201ENST00000503756 657 ntBASIC4.94□□□□□ -1.62
SOX4Q06945 AC025465.3-201ENST00000510570 311 ntBASIC4.94□□□□□ -1.62
SOX4Q06945 AC108043.1-201ENST00000512696 574 ntBASIC4.94□□□□□ -1.62
SOX4Q06945 RNU6-789P-201ENST00000517105 102 ntBASIC4.94□□□□□ -1.62
SOX4Q06945 IGKV2D-36-201ENST00000518643 226 ntBASIC4.94□□□□□ -1.62
SOX4Q06945 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.94□□□□□ -1.62
SOX4Q06945 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.94□□□□□ -1.62
SOX4Q06945 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.94□□□□□ -1.62
SOX4Q06945 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms