Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.24□□□□□ -1.89
CDK3Q00526 AL136097.1-201ENST00000456945 913 ntBASIC3.24□□□□□ -1.89
CDK3Q00526 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.24□□□□□ -1.89
CDK3Q00526 RPL23AP14-201ENST00000468281 468 ntBASIC3.24□□□□□ -1.89
CDK3Q00526 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CDK3Q00526 AC026427.2-201ENST00000506228 536 ntBASIC3.24□□□□□ -1.89
CDK3Q00526 RPL12P22-201ENST00000519073 490 ntBASIC3.24□□□□□ -1.89
CDK3Q00526 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.24□□□□□ -1.89
CDK3Q00526 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.24□□□□□ -1.89
CDK3Q00526 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.24□□□□□ -1.89
CDK3Q00526 AC005771.1-201ENST00000585581 349 ntBASIC3.24□□□□□ -1.89
CDK3Q00526 RN7SKP299-201ENST00000606679 301 ntBASIC3.24□□□□□ -1.89
CDK3Q00526 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.24□□□□□ -1.89
CDK3Q00526 AP000254.1-201ENST00000609934 520 ntBASIC3.24□□□□□ -1.89
CDK3Q00526 uc_338.1-201ENST00000612113 180 ntBASIC3.24□□□□□ -1.89
CDK3Q00526 AL157817.1-201ENST00000614264 790 ntBASIC3.24□□□□□ -1.89
CDK3Q00526 AC010133.1-201ENST00000615809 842 ntBASIC3.24□□□□□ -1.89
CDK3Q00526 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.24□□□□□ -1.89
CDK3Q00526 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.24□□□□□ -1.89
CDK3Q00526 AP003399.1-201ENST00000637534 361 ntBASIC3.24□□□□□ -1.89
CDK3Q00526 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
CDK3Q00526 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
CDK3Q00526 AC092104.1-201ENST00000497346 1441 ntBASIC3.24□□□□□ -1.89
CDK3Q00526 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CDK3Q00526 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.24□□□□□ -1.89
CDK3Q00526 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CDK3Q00526 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CDK3Q00526 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.24□□□□□ -1.89
CDK3Q00526 SDAD1P2-201ENST00000441308 2028 ntBASIC3.24□□□□□ -1.89
CDK3Q00526 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDK3Q00526 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDK3Q00526 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CDK3Q00526 PWAR6-201ENST00000552334 4618 ntBASIC3.23□□□□□ -1.89
CDK3Q00526 SNORD6-201ENST00000365444 73 ntBASIC3.23□□□□□ -1.89
CDK3Q00526 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDK3Q00526 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDK3Q00526 Y_RNA.553-201ENST00000384670 102 ntBASIC3.23□□□□□ -1.89
CDK3Q00526 MIR514A1-201ENST00000385133 98 ntBASIC3.23□□□□□ -1.89
CDK3Q00526 AL390237.1-201ENST00000404226 1415 ntBASIC3.23□□□□□ -1.89
CDK3Q00526 RPS3AP3-201ENST00000411933 242 ntBASIC3.23□□□□□ -1.89
CDK3Q00526 RPS15AP12-201ENST00000419498 388 ntBASIC3.23□□□□□ -1.89
CDK3Q00526 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.23□□□□□ -1.89
CDK3Q00526 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.23□□□□□ -1.89
CDK3Q00526 PGBD4P3-201ENST00000440731 581 ntBASIC3.23□□□□□ -1.89
CDK3Q00526 AL022238.1-201ENST00000442557 355 ntBASIC3.23□□□□□ -1.89
CDK3Q00526 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.23□□□□□ -1.89
CDK3Q00526 snoU109.1-201ENST00000459339 135 ntBASIC3.23□□□□□ -1.89
CDK3Q00526 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.23□□□□□ -1.89
CDK3Q00526 AC004801.2-202ENST00000463559 283 ntBASIC3.23□□□□□ -1.89
CDK3Q00526 AC010631.1-201ENST00000474150 156 ntBASIC3.23□□□□□ -1.89
CDK3Q00526 MTND1P3-201ENST00000484956 952 ntBASIC3.23□□□□□ -1.89
CDK3Q00526 RN7SL504P-201ENST00000494496 287 ntBASIC3.23□□□□□ -1.89
CDK3Q00526 PHBP14-201ENST00000512887 367 ntBASIC3.23□□□□□ -1.89
CDK3Q00526 MIR2276-201ENST00000516886 89 ntBASIC3.23□□□□□ -1.89
CDK3Q00526 RN7SKP57-201ENST00000517248 293 ntBASIC3.23□□□□□ -1.89
CDK3Q00526 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.23□□□□□ -1.89
CDK3Q00526 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.23□□□□□ -1.89
CDK3Q00526 AP000873.5-201ENST00000533906 236 ntBASIC3.23□□□□□ -1.89
CDK3Q00526 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.23□□□□□ -1.89
CDK3Q00526 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.23□□□□□ -1.89
CDK3Q00526 AL355836.1-201ENST00000555951 870 ntBASIC3.23□□□□□ -1.89
CDK3Q00526 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.23□□□□□ -1.89
CDK3Q00526 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.23□□□□□ -1.89
CDK3Q00526 AC037471.2-201ENST00000564941 598 ntBASIC3.23□□□□□ -1.89
CDK3Q00526 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.23□□□□□ -1.89
CDK3Q00526 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.23□□□□□ -1.89
CDK3Q00526 RSL24D1P11-201ENST00000591045 491 ntBASIC3.23□□□□□ -1.89
CDK3Q00526 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.23□□□□□ -1.89
CDK3Q00526 AC008277.2-201ENST00000605196 797 ntBASIC3.23□□□□□ -1.89
CDK3Q00526 AC087752.4-201ENST00000605911 462 ntBASIC3.23□□□□□ -1.89
CDK3Q00526 AL592295.2-201ENST00000612578 206 ntBASIC3.23□□□□□ -1.89
CDK3Q00526 SDR42E1P2-201ENST00000614861 481 ntBASIC3.23□□□□□ -1.89
CDK3Q00526 uc_338.12-201ENST00000616344 181 ntBASIC3.23□□□□□ -1.89
CDK3Q00526 AC008568.2-201ENST00000623862 2313 ntBASIC3.23□□□□□ -1.89
CDK3Q00526 AC090582.1-201ENST00000636321 199 ntBASIC3.23□□□□□ -1.89
CDK3Q00526 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CDK3Q00526 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.23□□□□□ -1.89
CDK3Q00526 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDK3Q00526 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.23□□□□□ -1.89
CDK3Q00526 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.22□□□□□ -1.89
CDK3Q00526 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
CDK3Q00526 AC021755.1-201ENST00000559747 1447 ntBASIC3.22□□□□□ -1.89
CDK3Q00526 Y_RNA.51-201ENST00000362725 102 ntBASIC3.22□□□□□ -1.89
CDK3Q00526 RNU2-62P-201ENST00000410868 191 ntBASIC3.22□□□□□ -1.89
CDK3Q00526 RNU4-47P-201ENST00000410876 114 ntBASIC3.22□□□□□ -1.89
CDK3Q00526 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.22□□□□□ -1.89
CDK3Q00526 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.22□□□□□ -1.89
CDK3Q00526 AL589872.1-201ENST00000426602 288 ntBASIC3.22□□□□□ -1.89
CDK3Q00526 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.22□□□□□ -1.89
CDK3Q00526 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.22□□□□□ -1.89
CDK3Q00526 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.22□□□□□ -1.89
CDK3Q00526 MTCO1P19-201ENST00000443487 500 ntBASIC3.22□□□□□ -1.89
CDK3Q00526 MTND6P13-201ENST00000443510 523 ntBASIC3.22□□□□□ -1.89
CDK3Q00526 USP9YP29-201ENST00000445112 563 ntBASIC3.22□□□□□ -1.89
CDK3Q00526 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.22□□□□□ -1.89
CDK3Q00526 SNORD42A-201ENST00000459584 64 ntBASIC3.22□□□□□ -1.89
CDK3Q00526 MTND4LP3-201ENST00000468320 276 ntBASIC3.22□□□□□ -1.89
CDK3Q00526 AC109925.1-201ENST00000478069 331 ntBASIC3.22□□□□□ -1.89
CDK3Q00526 AC021205.2-201ENST00000480069 347 ntBASIC3.22□□□□□ -1.89
CDK3Q00526 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms