Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SEC61A1P61619 RIOK3P1-201ENST00000418778 1528 ntBASIC3.36□□□□□ -1.87
SEC61A1P61619 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
SEC61A1P61619 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SEC61A1P61619 Y_RNA.61-201ENST00000362835 102 ntBASIC3.36□□□□□ -1.87
SEC61A1P61619 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.36□□□□□ -1.87
SEC61A1P61619 RNU6-1078P-201ENST00000364522 103 ntBASIC3.36□□□□□ -1.87
SEC61A1P61619 RNU6-335P-201ENST00000364563 113 ntBASIC3.36□□□□□ -1.87
SEC61A1P61619 RNU6-74P-201ENST00000384235 107 ntBASIC3.36□□□□□ -1.87
SEC61A1P61619 MIR184-201ENST00000384962 84 ntBASIC3.36□□□□□ -1.87
SEC61A1P61619 RNU6-1009P-201ENST00000390996 107 ntBASIC3.36□□□□□ -1.87
SEC61A1P61619 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SEC61A1P61619 RPL32P23-201ENST00000397237 405 ntBASIC3.36□□□□□ -1.87
SEC61A1P61619 RNU2-41P-201ENST00000410991 178 ntBASIC3.36□□□□□ -1.87
SEC61A1P61619 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.36□□□□□ -1.87
SEC61A1P61619 SDCBPP3-201ENST00000419629 891 ntBASIC3.36□□□□□ -1.87
SEC61A1P61619 AC012498.1-201ENST00000424037 437 ntBASIC3.36□□□□□ -1.87
SEC61A1P61619 MTND4P28-201ENST00000426217 387 ntBASIC3.36□□□□□ -1.87
SEC61A1P61619 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.36□□□□□ -1.87
SEC61A1P61619 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.36□□□□□ -1.87
SEC61A1P61619 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SEC61A1P61619 AC010655.1-201ENST00000449336 292 ntBASIC3.36□□□□□ -1.87
SEC61A1P61619 AC006480.1-201ENST00000449887 378 ntBASIC3.36□□□□□ -1.87
SEC61A1P61619 AC140076.1-201ENST00000449897 361 ntBASIC3.36□□□□□ -1.87
SEC61A1P61619 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.36□□□□□ -1.87
SEC61A1P61619 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.36□□□□□ -1.87
SEC61A1P61619 AMD1P1-201ENST00000457220 922 ntBASIC3.36□□□□□ -1.87
SEC61A1P61619 UBDP1-202ENST00000457888 382 ntBASIC3.36□□□□□ -1.87
SEC61A1P61619 RPS20P20-201ENST00000460498 340 ntBASIC3.36□□□□□ -1.87
SEC61A1P61619 AP000926.1-201ENST00000479573 241 ntBASIC3.36□□□□□ -1.87
SEC61A1P61619 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.36□□□□□ -1.87
SEC61A1P61619 RNU6-1095P-201ENST00000516148 108 ntBASIC3.36□□□□□ -1.87
SEC61A1P61619 SNORA40.12-201ENST00000516329 111 ntBASIC3.36□□□□□ -1.87
SEC61A1P61619 RN7SKP83-201ENST00000516512 178 ntBASIC3.36□□□□□ -1.87
SEC61A1P61619 RNU6-410P-201ENST00000517006 107 ntBASIC3.36□□□□□ -1.87
SEC61A1P61619 SNORA31.20-201ENST00000517111 133 ntBASIC3.36□□□□□ -1.87
SEC61A1P61619 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.36□□□□□ -1.87
SEC61A1P61619 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.36□□□□□ -1.87
SEC61A1P61619 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.36□□□□□ -1.87
SEC61A1P61619 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.36□□□□□ -1.87
SEC61A1P61619 AC123904.3-201ENST00000547218 814 ntBASIC3.36□□□□□ -1.87
SEC61A1P61619 MIR1254-2-201ENST00000579553 63 ntBASIC3.36□□□□□ -1.87
SEC61A1P61619 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SEC61A1P61619 AL606490.9-201ENST00000603331 271 ntBASIC3.36□□□□□ -1.87
SEC61A1P61619 C8orf59P2-201ENST00000603441 271 ntBASIC3.36□□□□□ -1.87
SEC61A1P61619 AL031176.1-201ENST00000604554 466 ntBASIC3.36□□□□□ -1.87
SEC61A1P61619 AL353621.2-201ENST00000605340 133 ntBASIC3.36□□□□□ -1.87
SEC61A1P61619 AC103710.2-201ENST00000609912 942 ntBASIC3.36□□□□□ -1.87
SEC61A1P61619 RMST_8.1-201ENST00000610287 165 ntBASIC3.36□□□□□ -1.87
SEC61A1P61619 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.36□□□□□ -1.87
SEC61A1P61619 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.36□□□□□ -1.87
SEC61A1P61619 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
SEC61A1P61619 AL138713.1-201ENST00000624026 2130 ntBASIC3.36□□□□□ -1.87
SEC61A1P61619 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.36□□□□□ -1.87
SEC61A1P61619 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.36□□□□□ -1.87
SEC61A1P61619 AC099654.5-201ENST00000636479 350 ntBASIC3.36□□□□□ -1.87
SEC61A1P61619 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.36□□□□□ -1.87
SEC61A1P61619 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.36□□□□□ -1.87
SEC61A1P61619 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SEC61A1P61619 AL645937.1-201ENST00000641739 1652 ntBASIC3.36□□□□□ -1.87
SEC61A1P61619 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.36□□□□□ -1.87
SEC61A1P61619 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
SEC61A1P61619 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SEC61A1P61619 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
SEC61A1P61619 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.35□□□□□ -1.87
SEC61A1P61619 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
SEC61A1P61619 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.35□□□□□ -1.87
SEC61A1P61619 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.35□□□□□ -1.87
SEC61A1P61619 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SEC61A1P61619 NACAP2-201ENST00000318548 624 ntBASIC3.35□□□□□ -1.87
SEC61A1P61619 Y_RNA.22-201ENST00000362492 102 ntBASIC3.35□□□□□ -1.87
SEC61A1P61619 RNU6-1155P-201ENST00000363554 107 ntBASIC3.35□□□□□ -1.87
SEC61A1P61619 RNU6-1097P-201ENST00000363586 107 ntBASIC3.35□□□□□ -1.87
SEC61A1P61619 RNA5SP235-201ENST00000365411 114 ntBASIC3.35□□□□□ -1.87
SEC61A1P61619 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.35□□□□□ -1.87
SEC61A1P61619 HMGN1P24-201ENST00000412282 298 ntBASIC3.35□□□□□ -1.87
SEC61A1P61619 OR51A5P-201ENST00000415429 942 ntBASIC3.35□□□□□ -1.87
SEC61A1P61619 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.35□□□□□ -1.87
SEC61A1P61619 OR1AA1P-201ENST00000419597 916 ntBASIC3.35□□□□□ -1.87
SEC61A1P61619 MTCYBP8-201ENST00000422855 651 ntBASIC3.35□□□□□ -1.87
SEC61A1P61619 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SEC61A1P61619 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.35□□□□□ -1.87
SEC61A1P61619 AC137499.1-201ENST00000427602 88 ntBASIC3.35□□□□□ -1.87
SEC61A1P61619 AC093156.1-201ENST00000440382 670 ntBASIC3.35□□□□□ -1.87
SEC61A1P61619 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.35□□□□□ -1.87
SEC61A1P61619 RPS29P31-201ENST00000446147 164 ntBASIC3.35□□□□□ -1.87
SEC61A1P61619 AL359073.1-201ENST00000448036 403 ntBASIC3.35□□□□□ -1.87
SEC61A1P61619 RPS17P13-201ENST00000448974 407 ntBASIC3.35□□□□□ -1.87
SEC61A1P61619 RNU7-63P-201ENST00000459054 62 ntBASIC3.35□□□□□ -1.87
SEC61A1P61619 AC007537.2-201ENST00000472093 511 ntBASIC3.35□□□□□ -1.87
SEC61A1P61619 RPL39P36-201ENST00000490784 156 ntBASIC3.35□□□□□ -1.87
SEC61A1P61619 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SEC61A1P61619 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.35□□□□□ -1.87
SEC61A1P61619 HMGB1P22-201ENST00000505315 124 ntBASIC3.35□□□□□ -1.87
SEC61A1P61619 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.35□□□□□ -1.87
SEC61A1P61619 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SEC61A1P61619 AC103843.2-201ENST00000530523 682 ntBASIC3.35□□□□□ -1.87
SEC61A1P61619 AP000857.1-201ENST00000532151 543 ntBASIC3.35□□□□□ -1.87
SEC61A1P61619 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.35□□□□□ -1.87
SEC61A1P61619 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms