Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 Y_RNA.688-201ENST00000516565 95 ntBASIC4.11□□□□□ -1.75
RHBDL3P58872 AP000867.2-201ENST00000532468 320 ntBASIC4.11□□□□□ -1.75
RHBDL3P58872 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.11□□□□□ -1.75
RHBDL3P58872 AC026333.2-201ENST00000542164 106 ntBASIC4.11□□□□□ -1.75
RHBDL3P58872 RPL21P5-201ENST00000554662 472 ntBASIC4.11□□□□□ -1.75
RHBDL3P58872 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.11□□□□□ -1.75
RHBDL3P58872 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.11□□□□□ -1.75
RHBDL3P58872 U73023.1-201ENST00000603134 700 ntBASIC4.11□□□□□ -1.75
RHBDL3P58872 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.11□□□□□ -1.75
RHBDL3P58872 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.11□□□□□ -1.75
RHBDL3P58872 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.11□□□□□ -1.75
RHBDL3P58872 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RHBDL3P58872 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RHBDL3P58872 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
RHBDL3P58872 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RHBDL3P58872 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RHBDL3P58872 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RHBDL3P58872 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
RHBDL3P58872 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.1□□□□□ -1.75
RHBDL3P58872 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RHBDL3P58872 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RHBDL3P58872 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.1□□□□□ -1.75
RHBDL3P58872 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RHBDL3P58872 FGF7P2-201ENST00000332473 296 ntBASIC4.1□□□□□ -1.75
RHBDL3P58872 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
RHBDL3P58872 RNY4P16-201ENST00000364768 94 ntBASIC4.1□□□□□ -1.75
RHBDL3P58872 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.1□□□□□ -1.75
RHBDL3P58872 RPS7P13-201ENST00000413955 498 ntBASIC4.1□□□□□ -1.75
RHBDL3P58872 RPS15AP12-201ENST00000419498 388 ntBASIC4.1□□□□□ -1.75
RHBDL3P58872 ZNF863P-201ENST00000426746 417 ntBASIC4.1□□□□□ -1.75
RHBDL3P58872 RPL21P40-201ENST00000428586 483 ntBASIC4.1□□□□□ -1.75
RHBDL3P58872 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.1□□□□□ -1.75
RHBDL3P58872 HMGB3P11-201ENST00000440127 604 ntBASIC4.1□□□□□ -1.75
RHBDL3P58872 Z75741.1-201ENST00000446793 314 ntBASIC4.1□□□□□ -1.75
RHBDL3P58872 HMGB3P8-201ENST00000449709 577 ntBASIC4.1□□□□□ -1.75
RHBDL3P58872 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.1□□□□□ -1.75
RHBDL3P58872 SNRPGP9-201ENST00000456025 225 ntBASIC4.1□□□□□ -1.75
RHBDL3P58872 RN7SL93P-201ENST00000463035 293 ntBASIC4.1□□□□□ -1.75
RHBDL3P58872 RBM43P1-201ENST00000476891 1081 ntBASIC4.1□□□□□ -1.75
RHBDL3P58872 RN7SL432P-201ENST00000484057 298 ntBASIC4.1□□□□□ -1.75
RHBDL3P58872 AC006483.1-201ENST00000487308 313 ntBASIC4.1□□□□□ -1.75
RHBDL3P58872 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.1□□□□□ -1.75
RHBDL3P58872 Y_RNA.672-201ENST00000516289 104 ntBASIC4.1□□□□□ -1.75
RHBDL3P58872 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RHBDL3P58872 AC107934.1-201ENST00000522215 217 ntBASIC4.1□□□□□ -1.75
RHBDL3P58872 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.1□□□□□ -1.75
RHBDL3P58872 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.1□□□□□ -1.75
RHBDL3P58872 RPS3AP4-201ENST00000555161 764 ntBASIC4.1□□□□□ -1.75
RHBDL3P58872 MIR3118-1-201ENST00000581787 76 ntBASIC4.1□□□□□ -1.75
RHBDL3P58872 CKS1BP3-201ENST00000600888 237 ntBASIC4.1□□□□□ -1.75
RHBDL3P58872 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.1□□□□□ -1.75
RHBDL3P58872 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.1□□□□□ -1.75
RHBDL3P58872 MIR486-1-201ENST00000612171 68 ntBASIC4.1□□□□□ -1.75
RHBDL3P58872 MIR8057-201ENST00000620957 69 ntBASIC4.1□□□□□ -1.75
RHBDL3P58872 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.1□□□□□ -1.75
RHBDL3P58872 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RHBDL3P58872 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
RHBDL3P58872 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RHBDL3P58872 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
RHBDL3P58872 NCAPGP1-201ENST00000505112 1814 ntBASIC4.09□□□□□ -1.75
RHBDL3P58872 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
RHBDL3P58872 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
RHBDL3P58872 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.09□□□□□ -1.75
RHBDL3P58872 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.09□□□□□ -1.75
RHBDL3P58872 AL137003.2-201ENST00000606924 2538 ntBASIC4.09□□□□□ -1.75
RHBDL3P58872 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
RHBDL3P58872 RN7SKP56-201ENST00000410513 331 ntBASIC4.09□□□□□ -1.75
RHBDL3P58872 RHEBP3-201ENST00000411920 351 ntBASIC4.09□□□□□ -1.75
RHBDL3P58872 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.09□□□□□ -1.75
RHBDL3P58872 AC009518.2-201ENST00000418056 731 ntBASIC4.09□□□□□ -1.75
RHBDL3P58872 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.09□□□□□ -1.75
RHBDL3P58872 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.09□□□□□ -1.75
RHBDL3P58872 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.09□□□□□ -1.75
RHBDL3P58872 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.09□□□□□ -1.75
RHBDL3P58872 CYCSP32-201ENST00000440548 321 ntBASIC4.09□□□□□ -1.75
RHBDL3P58872 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.09□□□□□ -1.75
RHBDL3P58872 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.09□□□□□ -1.75
RHBDL3P58872 KC877373.1-201ENST00000479066 408 ntBASIC4.09□□□□□ -1.75
RHBDL3P58872 AL135752.1-201ENST00000479477 471 ntBASIC4.09□□□□□ -1.75
RHBDL3P58872 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.09□□□□□ -1.75
RHBDL3P58872 PHBP14-201ENST00000512887 367 ntBASIC4.09□□□□□ -1.75
RHBDL3P58872 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.09□□□□□ -1.75
RHBDL3P58872 AC005476.1-201ENST00000554427 397 ntBASIC4.09□□□□□ -1.75
RHBDL3P58872 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.09□□□□□ -1.75
RHBDL3P58872 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.09□□□□□ -1.75
RHBDL3P58872 AL845331.3-202ENST00000562856 261 ntBASIC4.09□□□□□ -1.75
RHBDL3P58872 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.09□□□□□ -1.75
RHBDL3P58872 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.09□□□□□ -1.75
RHBDL3P58872 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.09□□□□□ -1.75
RHBDL3P58872 GLUD1P4-201ENST00000590914 418 ntBASIC4.09□□□□□ -1.75
RHBDL3P58872 AL160281.1-201ENST00000605307 311 ntBASIC4.09□□□□□ -1.75
RHBDL3P58872 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.09□□□□□ -1.75
RHBDL3P58872 AC006338.1-201ENST00000618453 749 ntBASIC4.09□□□□□ -1.75
RHBDL3P58872 U7.8-201ENST00000619968 63 ntBASIC4.09□□□□□ -1.75
RHBDL3P58872 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.09□□□□□ -1.75
RHBDL3P58872 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
RHBDL3P58872 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.09□□□□□ -1.75
RHBDL3P58872 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.09□□□□□ -1.75
RHBDL3P58872 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
RHBDL3P58872 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms