Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC107294.1-201ENST00000609524 467 ntBASIC3.81□□□□□ -1.8
SUMO3P55854 RMST_3.1-201ENST00000611651 109 ntBASIC3.81□□□□□ -1.8
SUMO3P55854 AL110115.1-201ENST00000614396 364 ntBASIC3.81□□□□□ -1.8
SUMO3P55854 U6.42-201ENST00000618440 107 ntBASIC3.81□□□□□ -1.8
SUMO3P55854 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.81□□□□□ -1.8
SUMO3P55854 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.81□□□□□ -1.8
SUMO3P55854 MTND1P37-201ENST00000636562 264 ntBASIC3.81□□□□□ -1.8
SUMO3P55854 AC011266.1-201ENST00000624119 3569 ntBASIC3.81□□□□□ -1.8
SUMO3P55854 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.81□□□□□ -1.8
SUMO3P55854 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.81□□□□□ -1.8
SUMO3P55854 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SUMO3P55854 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SUMO3P55854 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SUMO3P55854 AC090740.1-201ENST00000623193 2262 ntBASIC3.81□□□□□ -1.8
SUMO3P55854 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SUMO3P55854 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.8□□□□□ -1.8
SUMO3P55854 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SUMO3P55854 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SUMO3P55854 LARP1BP1-201ENST00000506036 1359 ntBASIC3.8□□□□□ -1.8
SUMO3P55854 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SUMO3P55854 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.8□□□□□ -1.8
SUMO3P55854 RNU6-1167P-201ENST00000363227 94 ntBASIC3.8□□□□□ -1.8
SUMO3P55854 RNU6-741P-201ENST00000383889 107 ntBASIC3.8□□□□□ -1.8
SUMO3P55854 RNY3P14-201ENST00000384309 102 ntBASIC3.8□□□□□ -1.8
SUMO3P55854 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SUMO3P55854 RNU6-1197P-201ENST00000391183 107 ntBASIC3.8□□□□□ -1.8
SUMO3P55854 AL121834.1-202ENST00000404494 277 ntBASIC3.8□□□□□ -1.8
SUMO3P55854 BX842559.1-201ENST00000419615 532 ntBASIC3.8□□□□□ -1.8
SUMO3P55854 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.8□□□□□ -1.8
SUMO3P55854 COX6B1P7-201ENST00000430845 235 ntBASIC3.8□□□□□ -1.8
SUMO3P55854 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.8□□□□□ -1.8
SUMO3P55854 AL121877.1-201ENST00000453704 622 ntBASIC3.8□□□□□ -1.8
SUMO3P55854 RNU7-180P-201ENST00000459240 63 ntBASIC3.8□□□□□ -1.8
SUMO3P55854 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.8□□□□□ -1.8
SUMO3P55854 AC091885.1-201ENST00000506658 268 ntBASIC3.8□□□□□ -1.8
SUMO3P55854 RNA5SP291-201ENST00000517222 105 ntBASIC3.8□□□□□ -1.8
SUMO3P55854 AC022655.2-201ENST00000577280 318 ntBASIC3.8□□□□□ -1.8
SUMO3P55854 AC093227.2-201ENST00000589357 285 ntBASIC3.8□□□□□ -1.8
SUMO3P55854 AC098826.3-201ENST00000603823 466 ntBASIC3.8□□□□□ -1.8
SUMO3P55854 AL138889.2-201ENST00000603883 242 ntBASIC3.8□□□□□ -1.8
SUMO3P55854 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.8□□□□□ -1.8
SUMO3P55854 AL670379.4-201ENST00000605279 254 ntBASIC3.8□□□□□ -1.8
SUMO3P55854 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.8□□□□□ -1.8
SUMO3P55854 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SUMO3P55854 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.8□□□□□ -1.8
SUMO3P55854 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SUMO3P55854 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SUMO3P55854 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
SUMO3P55854 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
SUMO3P55854 CASC19-280ENST00000642102 1351 ntBASIC3.79□□□□□ -1.8
SUMO3P55854 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.79□□□□□ -1.8
SUMO3P55854 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SUMO3P55854 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SUMO3P55854 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.79□□□□□ -1.8
SUMO3P55854 SNORA60-201ENST00000362396 134 ntBASIC3.79□□□□□ -1.8
SUMO3P55854 AL606923.1-201ENST00000406616 190 ntBASIC3.79□□□□□ -1.8
SUMO3P55854 AC016397.1-201ENST00000412463 242 ntBASIC3.79□□□□□ -1.8
SUMO3P55854 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.79□□□□□ -1.8
SUMO3P55854 AC138393.2-201ENST00000414742 246 ntBASIC3.79□□□□□ -1.8
SUMO3P55854 AC108032.1-201ENST00000416706 207 ntBASIC3.79□□□□□ -1.8
SUMO3P55854 BTF3L4P3-201ENST00000418879 476 ntBASIC3.79□□□□□ -1.8
SUMO3P55854 RPL30P16-201ENST00000419341 429 ntBASIC3.79□□□□□ -1.8
SUMO3P55854 YPEL5P1-201ENST00000419731 367 ntBASIC3.79□□□□□ -1.8
SUMO3P55854 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.79□□□□□ -1.8
SUMO3P55854 TRBV1-201ENST00000476502 284 ntBASIC3.79□□□□□ -1.8
SUMO3P55854 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.79□□□□□ -1.8
SUMO3P55854 AP001086.1-201ENST00000494882 321 ntBASIC3.79□□□□□ -1.8
SUMO3P55854 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.79□□□□□ -1.8
SUMO3P55854 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.79□□□□□ -1.8
SUMO3P55854 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.79□□□□□ -1.8
SUMO3P55854 AL137161.1-201ENST00000532231 390 ntBASIC3.79□□□□□ -1.8
SUMO3P55854 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.79□□□□□ -1.8
SUMO3P55854 AC069240.1-201ENST00000548774 375 ntBASIC3.79□□□□□ -1.8
SUMO3P55854 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.79□□□□□ -1.8
SUMO3P55854 MIR4424-201ENST00000585257 86 ntBASIC3.79□□□□□ -1.8
SUMO3P55854 AC010525.2-201ENST00000590920 195 ntBASIC3.79□□□□□ -1.8
SUMO3P55854 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.79□□□□□ -1.8
SUMO3P55854 BNIP3P9-201ENST00000603714 553 ntBASIC3.79□□□□□ -1.8
SUMO3P55854 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
SUMO3P55854 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.79□□□□□ -1.8
SUMO3P55854 AL357559.1-201ENST00000622228 274 ntBASIC3.79□□□□□ -1.8
SUMO3P55854 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.79□□□□□ -1.8
SUMO3P55854 AP003122.6-201ENST00000623831 495 ntBASIC3.79□□□□□ -1.8
SUMO3P55854 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SUMO3P55854 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.79□□□□□ -1.8
SUMO3P55854 OR4G1P-203ENST00000641984 1631 ntBASIC3.79□□□□□ -1.8
SUMO3P55854 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
SUMO3P55854 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SUMO3P55854 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SUMO3P55854 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SUMO3P55854 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.79□□□□□ -1.8
SUMO3P55854 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.78□□□□□ -1.8
SUMO3P55854 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.78□□□□□ -1.8
SUMO3P55854 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SUMO3P55854 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
SUMO3P55854 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.78□□□□□ -1.8
SUMO3P55854 RNU6-116P-201ENST00000384042 109 ntBASIC3.78□□□□□ -1.8
SUMO3P55854 Y_RNA.534-201ENST00000384599 112 ntBASIC3.78□□□□□ -1.8
SUMO3P55854 UBE2V1P2-201ENST00000397758 440 ntBASIC3.78□□□□□ -1.8
SUMO3P55854 RNU2-33P-201ENST00000410344 192 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms