Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AL591416.1-201ENST00000404015 867 ntBASIC3.44□□□□□ -1.86
CDH12P55289 AL078595.1-201ENST00000404458 226 ntBASIC3.44□□□□□ -1.86
CDH12P55289 AL359634.1-202ENST00000404721 284 ntBASIC3.44□□□□□ -1.86
CDH12P55289 AC022028.1-201ENST00000412054 408 ntBASIC3.44□□□□□ -1.86
CDH12P55289 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.44□□□□□ -1.86
CDH12P55289 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.44□□□□□ -1.86
CDH12P55289 AC093106.2-201ENST00000428212 385 ntBASIC3.44□□□□□ -1.86
CDH12P55289 AL117339.2-201ENST00000430475 180 ntBASIC3.44□□□□□ -1.86
CDH12P55289 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.44□□□□□ -1.86
CDH12P55289 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.44□□□□□ -1.86
CDH12P55289 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.44□□□□□ -1.86
CDH12P55289 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.44□□□□□ -1.86
CDH12P55289 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.44□□□□□ -1.86
CDH12P55289 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.44□□□□□ -1.86
CDH12P55289 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.44□□□□□ -1.86
CDH12P55289 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.44□□□□□ -1.86
CDH12P55289 AC026427.2-201ENST00000506228 536 ntBASIC3.44□□□□□ -1.86
CDH12P55289 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.44□□□□□ -1.86
CDH12P55289 RNA5SP164-201ENST00000516533 110 ntBASIC3.44□□□□□ -1.86
CDH12P55289 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CDH12P55289 AP001646.1-201ENST00000527936 915 ntBASIC3.44□□□□□ -1.86
CDH12P55289 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.44□□□□□ -1.86
CDH12P55289 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.44□□□□□ -1.86
CDH12P55289 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.44□□□□□ -1.86
CDH12P55289 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.44□□□□□ -1.86
CDH12P55289 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.44□□□□□ -1.86
CDH12P55289 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.44□□□□□ -1.86
CDH12P55289 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.44□□□□□ -1.86
CDH12P55289 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.44□□□□□ -1.86
CDH12P55289 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.44□□□□□ -1.86
CDH12P55289 MIR548S-201ENST00000581352 82 ntBASIC3.44□□□□□ -1.86
CDH12P55289 AC010928.3-201ENST00000587712 541 ntBASIC3.44□□□□□ -1.86
CDH12P55289 AF038458.1-201ENST00000588406 262 ntBASIC3.44□□□□□ -1.86
CDH12P55289 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.44□□□□□ -1.86
CDH12P55289 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.44□□□□□ -1.86
CDH12P55289 AL162413.1-201ENST00000603198 110 ntBASIC3.44□□□□□ -1.86
CDH12P55289 AL590392.1-201ENST00000604960 446 ntBASIC3.44□□□□□ -1.86
CDH12P55289 MIR6748-201ENST00000610433 71 ntBASIC3.44□□□□□ -1.86
CDH12P55289 C2orf27A-204ENST00000623058 969 ntBASIC3.44□□□□□ -1.86
CDH12P55289 AC093648.1-201ENST00000623546 606 ntBASIC3.44□□□□□ -1.86
CDH12P55289 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.44□□□□□ -1.86
CDH12P55289 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.44□□□□□ -1.86
CDH12P55289 AC009812.4-201ENST00000569134 1805 ntBASIC3.44□□□□□ -1.86
CDH12P55289 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDH12P55289 TAB3P1-202ENST00000452645 1634 ntBASIC3.44□□□□□ -1.86
CDH12P55289 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDH12P55289 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CDH12P55289 AL021368.2-201ENST00000606125 5352 ntBASIC3.43□□□□□ -1.86
CDH12P55289 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDH12P55289 AC066616.2-201ENST00000559334 1481 ntBASIC3.43□□□□□ -1.86
CDH12P55289 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
CDH12P55289 SNORA62-201ENST00000365493 153 ntBASIC3.43□□□□□ -1.86
CDH12P55289 SNORA69-201ENST00000383895 132 ntBASIC3.43□□□□□ -1.86
CDH12P55289 RNU6-76P-201ENST00000384060 104 ntBASIC3.43□□□□□ -1.86
CDH12P55289 MIR141-201ENST00000384975 95 ntBASIC3.43□□□□□ -1.86
CDH12P55289 AC110754.1-201ENST00000399740 601 ntBASIC3.43□□□□□ -1.86
CDH12P55289 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CDH12P55289 MTATP6P4-201ENST00000427725 675 ntBASIC3.43□□□□□ -1.86
CDH12P55289 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.43□□□□□ -1.86
CDH12P55289 GTF2IP20-201ENST00000431663 360 ntBASIC3.43□□□□□ -1.86
CDH12P55289 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.43□□□□□ -1.86
CDH12P55289 OR4C10P-201ENST00000434991 931 ntBASIC3.43□□□□□ -1.86
CDH12P55289 RPL26P6-201ENST00000440913 438 ntBASIC3.43□□□□□ -1.86
CDH12P55289 AC016691.1-201ENST00000441321 413 ntBASIC3.43□□□□□ -1.86
CDH12P55289 RPS24P6-201ENST00000452670 400 ntBASIC3.43□□□□□ -1.86
CDH12P55289 CACYBPP2-201ENST00000453625 678 ntBASIC3.43□□□□□ -1.86
CDH12P55289 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH12P55289 snoU13.24-201ENST00000458998 104 ntBASIC3.43□□□□□ -1.86
CDH12P55289 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CDH12P55289 AC126389.1-201ENST00000477436 290 ntBASIC3.43□□□□□ -1.86
CDH12P55289 AC233702.1-201ENST00000482905 502 ntBASIC3.43□□□□□ -1.86
CDH12P55289 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.43□□□□□ -1.86
CDH12P55289 NDUFB4P9-201ENST00000511646 388 ntBASIC3.43□□□□□ -1.86
CDH12P55289 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH12P55289 RNU6-352P-201ENST00000516908 107 ntBASIC3.43□□□□□ -1.86
CDH12P55289 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH12P55289 AC103843.2-201ENST00000530523 682 ntBASIC3.43□□□□□ -1.86
CDH12P55289 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH12P55289 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.43□□□□□ -1.86
CDH12P55289 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH12P55289 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.43□□□□□ -1.86
CDH12P55289 AC008752.3-201ENST00000588113 712 ntBASIC3.43□□□□□ -1.86
CDH12P55289 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.43□□□□□ -1.86
CDH12P55289 AL606490.9-201ENST00000603331 271 ntBASIC3.43□□□□□ -1.86
CDH12P55289 AC012443.1-201ENST00000605605 231 ntBASIC3.43□□□□□ -1.86
CDH12P55289 AL020991.1-201ENST00000612314 373 ntBASIC3.43□□□□□ -1.86
CDH12P55289 U7.8-201ENST00000619968 63 ntBASIC3.43□□□□□ -1.86
CDH12P55289 YWHAEP7-203ENST00000622054 312 ntBASIC3.43□□□□□ -1.86
CDH12P55289 FER-210ENST00000628534 558 ntTSL 5 BASIC3.43□□□□□ -1.86
CDH12P55289 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.43□□□□□ -1.86
CDH12P55289 AC099654.14-201ENST00000638599 341 ntBASIC3.43□□□□□ -1.86
CDH12P55289 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CDH12P55289 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDH12P55289 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.43□□□□□ -1.86
CDH12P55289 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.43□□□□□ -1.86
CDH12P55289 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CDH12P55289 AC004925.1-201ENST00000624256 2706 ntBASIC3.42□□□□□ -1.86
CDH12P55289 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
CDH12P55289 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CDH12P55289 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms