Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 AC246785.4-201ENST00000605374 287 ntBASIC3.88□□□□□ -1.79
CDK7P50613 AC091304.9-201ENST00000612091 226 ntBASIC3.88□□□□□ -1.79
CDK7P50613 AC091905.1-201ENST00000624400 311 ntBASIC3.88□□□□□ -1.79
CDK7P50613 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.88□□□□□ -1.79
CDK7P50613 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.88□□□□□ -1.79
CDK7P50613 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CDK7P50613 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CDK7P50613 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CDK7P50613 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CDK7P50613 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
CDK7P50613 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CDK7P50613 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.87□□□□□ -1.79
CDK7P50613 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDK7P50613 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CDK7P50613 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CDK7P50613 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDK7P50613 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.87□□□□□ -1.79
CDK7P50613 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDK7P50613 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
CDK7P50613 OR1S2-201ENST00000302592 978 ntBASIC3.87□□□□□ -1.79
CDK7P50613 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CDK7P50613 Y_RNA.3-201ENST00000362331 103 ntBASIC3.87□□□□□ -1.79
CDK7P50613 RNU6-223P-201ENST00000362830 107 ntBASIC3.87□□□□□ -1.79
CDK7P50613 SNORA51.2-201ENST00000364595 132 ntBASIC3.87□□□□□ -1.79
CDK7P50613 HSPE1P8-201ENST00000406997 288 ntBASIC3.87□□□□□ -1.79
CDK7P50613 RNA5SP107-201ENST00000411358 122 ntBASIC3.87□□□□□ -1.79
CDK7P50613 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.87□□□□□ -1.79
CDK7P50613 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.87□□□□□ -1.79
CDK7P50613 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.87□□□□□ -1.79
CDK7P50613 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.87□□□□□ -1.79
CDK7P50613 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.87□□□□□ -1.79
CDK7P50613 AC137499.1-201ENST00000427602 88 ntBASIC3.87□□□□□ -1.79
CDK7P50613 AC010975.2-201ENST00000427781 588 ntBASIC3.87□□□□□ -1.79
CDK7P50613 AC009961.2-201ENST00000435771 251 ntBASIC3.87□□□□□ -1.79
CDK7P50613 AL671855.1-201ENST00000446875 1203 ntBASIC3.87□□□□□ -1.79
CDK7P50613 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.87□□□□□ -1.79
CDK7P50613 NANOGNBP1-201ENST00000448444 480 ntBASIC3.87□□□□□ -1.79
CDK7P50613 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.87□□□□□ -1.79
CDK7P50613 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.87□□□□□ -1.79
CDK7P50613 RBM43P1-201ENST00000476891 1081 ntBASIC3.87□□□□□ -1.79
CDK7P50613 AC011825.1-201ENST00000484967 388 ntBASIC3.87□□□□□ -1.79
CDK7P50613 AC107401.1-201ENST00000503426 685 ntBASIC3.87□□□□□ -1.79
CDK7P50613 AC005921.1-201ENST00000510589 286 ntBASIC3.87□□□□□ -1.79
CDK7P50613 AC022483.1-201ENST00000514020 567 ntBASIC3.87□□□□□ -1.79
CDK7P50613 RNU6-579P-201ENST00000516879 102 ntBASIC3.87□□□□□ -1.79
CDK7P50613 RN7SKP209-201ENST00000516888 304 ntBASIC3.87□□□□□ -1.79
CDK7P50613 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.87□□□□□ -1.79
CDK7P50613 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.87□□□□□ -1.79
CDK7P50613 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.87□□□□□ -1.79
CDK7P50613 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.87□□□□□ -1.79
CDK7P50613 BRDTP1-201ENST00000605735 677 ntBASIC3.87□□□□□ -1.79
CDK7P50613 AC026585.1-201ENST00000619582 524 ntBASIC3.87□□□□□ -1.79
CDK7P50613 AC095031.1-201ENST00000623685 672 ntBASIC3.87□□□□□ -1.79
CDK7P50613 AL138713.1-201ENST00000624026 2130 ntBASIC3.87□□□□□ -1.79
CDK7P50613 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.87□□□□□ -1.79
CDK7P50613 OR5AK4P-201ENST00000635912 903 ntBASIC3.87□□□□□ -1.79
CDK7P50613 AC092326.2-201ENST00000624772 1561 ntBASIC3.87□□□□□ -1.79
CDK7P50613 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDK7P50613 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDK7P50613 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.87□□□□□ -1.79
CDK7P50613 AL645937.1-201ENST00000641739 1652 ntBASIC3.87□□□□□ -1.79
CDK7P50613 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.87□□□□□ -1.79
CDK7P50613 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDK7P50613 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.87□□□□□ -1.79
CDK7P50613 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDK7P50613 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDK7P50613 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CDK7P50613 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDK7P50613 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.86□□□□□ -1.79
CDK7P50613 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDK7P50613 FRG1CP-201ENST00000358464 769 ntBASIC3.86□□□□□ -1.79
CDK7P50613 RNU5E-8P-201ENST00000363502 116 ntBASIC3.86□□□□□ -1.79
CDK7P50613 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CDK7P50613 MIR607-201ENST00000385241 96 ntBASIC3.86□□□□□ -1.79
CDK7P50613 Y_RNA.582-201ENST00000391023 95 ntBASIC3.86□□□□□ -1.79
CDK7P50613 RNU6-754P-201ENST00000391166 107 ntBASIC3.86□□□□□ -1.79
CDK7P50613 AL109755.1-201ENST00000401791 649 ntBASIC3.86□□□□□ -1.79
CDK7P50613 RN7SKP53-201ENST00000411337 315 ntBASIC3.86□□□□□ -1.79
CDK7P50613 RPL21P24-201ENST00000413752 448 ntBASIC3.86□□□□□ -1.79
CDK7P50613 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.86□□□□□ -1.79
CDK7P50613 AC002075.2-201ENST00000425207 252 ntBASIC3.86□□□□□ -1.79
CDK7P50613 MTCO1P39-201ENST00000426148 480 ntBASIC3.86□□□□□ -1.79
CDK7P50613 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.86□□□□□ -1.79
CDK7P50613 AC093156.1-201ENST00000440382 670 ntBASIC3.86□□□□□ -1.79
CDK7P50613 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.86□□□□□ -1.79
CDK7P50613 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.86□□□□□ -1.79
CDK7P50613 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CDK7P50613 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.86□□□□□ -1.79
CDK7P50613 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.86□□□□□ -1.79
CDK7P50613 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.86□□□□□ -1.79
CDK7P50613 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CDK7P50613 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.86□□□□□ -1.79
CDK7P50613 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.86□□□□□ -1.79
CDK7P50613 AP000860.1-201ENST00000605250 559 ntBASIC3.86□□□□□ -1.79
CDK7P50613 AL592295.2-201ENST00000612578 206 ntBASIC3.86□□□□□ -1.79
CDK7P50613 RNVU1-4-201ENST00000612985 164 ntBASIC3.86□□□□□ -1.79
CDK7P50613 AC093838.1-201ENST00000613014 469 ntBASIC3.86□□□□□ -1.79
CDK7P50613 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.86□□□□□ -1.79
CDK7P50613 AL603758.1-201ENST00000618654 241 ntBASIC3.86□□□□□ -1.79
CDK7P50613 MIR6130-201ENST00000619419 109 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms