Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 RPS4XP8-201ENST00000402039 771 ntBASIC1.89□□□□□ -2.11
CDC34P49427 AL512604.1-201ENST00000404812 257 ntBASIC1.89□□□□□ -2.11
CDC34P49427 RNU2-40P-201ENST00000410833 196 ntBASIC1.89□□□□□ -2.11
CDC34P49427 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC1.89□□□□□ -2.11
CDC34P49427 MTATP6P27-201ENST00000416987 621 ntBASIC1.89□□□□□ -2.11
CDC34P49427 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CDC34P49427 BPY2DP-201ENST00000422208 265 ntBASIC1.89□□□□□ -2.11
CDC34P49427 AL512649.1-201ENST00000428997 581 ntBASIC1.89□□□□□ -2.11
CDC34P49427 AL050321.1-201ENST00000432363 400 ntBASIC1.89□□□□□ -2.11
CDC34P49427 AC091390.1-201ENST00000433904 331 ntBASIC1.89□□□□□ -2.11
CDC34P49427 PRSS3P4-201ENST00000453323 162 ntBASIC1.89□□□□□ -2.11
CDC34P49427 MTCO1P42-201ENST00000457379 726 ntBASIC1.89□□□□□ -2.11
CDC34P49427 AC026410.2-201ENST00000460281 156 ntBASIC1.89□□□□□ -2.11
CDC34P49427 RPS20P20-201ENST00000460498 340 ntBASIC1.89□□□□□ -2.11
CDC34P49427 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC1.89□□□□□ -2.11
CDC34P49427 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.89□□□□□ -2.11
CDC34P49427 AC010460.2-201ENST00000509054 677 ntBASIC1.89□□□□□ -2.11
CDC34P49427 AC096725.1-201ENST00000514266 313 ntBASIC1.89□□□□□ -2.11
CDC34P49427 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.89□□□□□ -2.11
CDC34P49427 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.89□□□□□ -2.11
CDC34P49427 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CDC34P49427 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC1.89□□□□□ -2.11
CDC34P49427 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.89□□□□□ -2.11
CDC34P49427 AC007448.1-201ENST00000582714 234 ntBASIC1.89□□□□□ -2.11
CDC34P49427 MIR4697-201ENST00000582977 78 ntBASIC1.89□□□□□ -2.11
CDC34P49427 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.89□□□□□ -2.11
CDC34P49427 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.89□□□□□ -2.11
CDC34P49427 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
CDC34P49427 ZNF720P1-201ENST00000562403 1939 ntBASIC1.89□□□□□ -2.11
CDC34P49427 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CDC34P49427 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CDC34P49427 AC005539.1-201ENST00000443768 1479 ntBASIC1.88□□□□□ -2.11
CDC34P49427 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CDC34P49427 RNU6-1066P-201ENST00000363573 105 ntBASIC1.88□□□□□ -2.11
CDC34P49427 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.88□□□□□ -2.11
CDC34P49427 UBE2V1P15-201ENST00000407776 448 ntBASIC1.88□□□□□ -2.11
CDC34P49427 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC1.88□□□□□ -2.11
CDC34P49427 OR4K6P-201ENST00000416478 897 ntBASIC1.88□□□□□ -2.11
CDC34P49427 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.88□□□□□ -2.11
CDC34P49427 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.88□□□□□ -2.11
CDC34P49427 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.88□□□□□ -2.11
CDC34P49427 RPL30P4-201ENST00000429309 333 ntBASIC1.88□□□□□ -2.11
CDC34P49427 AC007919.1-201ENST00000429380 217 ntBASIC1.88□□□□□ -2.11
CDC34P49427 RPS24P13-201ENST00000442520 397 ntBASIC1.88□□□□□ -2.11
CDC34P49427 LINC00888-204ENST00000487386 421 ntBASIC1.88□□□□□ -2.11
CDC34P49427 RPS29P20-201ENST00000489592 171 ntBASIC1.88□□□□□ -2.11
CDC34P49427 RNA5SP341-201ENST00000516261 117 ntBASIC1.88□□□□□ -2.11
CDC34P49427 SNORA48.9-201ENST00000516419 162 ntBASIC1.88□□□□□ -2.11
CDC34P49427 RNU6-528P-201ENST00000516926 100 ntBASIC1.88□□□□□ -2.11
CDC34P49427 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.88□□□□□ -2.11
CDC34P49427 AC025755.1-201ENST00000521306 278 ntBASIC1.88□□□□□ -2.11
CDC34P49427 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.88□□□□□ -2.11
CDC34P49427 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.88□□□□□ -2.11
CDC34P49427 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.88□□□□□ -2.11
CDC34P49427 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC1.88□□□□□ -2.11
CDC34P49427 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC1.88□□□□□ -2.11
CDC34P49427 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC1.88□□□□□ -2.11
CDC34P49427 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC1.88□□□□□ -2.11
CDC34P49427 AL035411.2-201ENST00000604022 421 ntBASIC1.88□□□□□ -2.11
CDC34P49427 AC068276.1-201ENST00000605793 379 ntBASIC1.88□□□□□ -2.11
CDC34P49427 AC067747.1-201ENST00000608026 250 ntBASIC1.88□□□□□ -2.11
CDC34P49427 AC104763.3-201ENST00000613765 618 ntBASIC1.88□□□□□ -2.11
CDC34P49427 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.88□□□□□ -2.11
CDC34P49427 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.88□□□□□ -2.11
CDC34P49427 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CDC34P49427 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CDC34P49427 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CDC34P49427 AC131280.1-202ENST00000624067 4211 ntBASIC1.87□□□□□ -2.11
CDC34P49427 RNVU1-14-201ENST00000384770 164 ntBASIC1.87□□□□□ -2.11
CDC34P49427 HMGB3P2-201ENST00000411913 584 ntBASIC1.87□□□□□ -2.11
CDC34P49427 NDUFS5P4-201ENST00000412983 318 ntBASIC1.87□□□□□ -2.11
CDC34P49427 BX276092.3-201ENST00000424182 230 ntBASIC1.87□□□□□ -2.11
CDC34P49427 MTCYBP32-201ENST00000427945 1084 ntBASIC1.87□□□□□ -2.11
CDC34P49427 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.87□□□□□ -2.11
CDC34P49427 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC1.87□□□□□ -2.11
CDC34P49427 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.87□□□□□ -2.11
CDC34P49427 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.87□□□□□ -2.11
CDC34P49427 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.87□□□□□ -2.11
CDC34P49427 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC1.87□□□□□ -2.11
CDC34P49427 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC1.87□□□□□ -2.11
CDC34P49427 AC008413.1-201ENST00000511864 177 ntBASIC1.87□□□□□ -2.11
CDC34P49427 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.87□□□□□ -2.11
CDC34P49427 RN7SKP31-201ENST00000516354 278 ntBASIC1.87□□□□□ -2.11
CDC34P49427 AC079600.2-201ENST00000550076 130 ntBASIC1.87□□□□□ -2.11
CDC34P49427 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.87□□□□□ -2.11
CDC34P49427 ZNF971P-201ENST00000562068 1249 ntBASIC1.87□□□□□ -2.11
CDC34P49427 MIR4789-201ENST00000577469 82 ntBASIC1.87□□□□□ -2.11
CDC34P49427 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.87□□□□□ -2.11
CDC34P49427 AC005034.5-201ENST00000604219 466 ntBASIC1.87□□□□□ -2.11
CDC34P49427 AC011451.2-201ENST00000604303 598 ntBASIC1.87□□□□□ -2.11
CDC34P49427 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
CDC34P49427 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
CDC34P49427 AC103710.2-202ENST00000641454 2853 ntBASIC1.87□□□□□ -2.11
CDC34P49427 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.87□□□□□ -2.11
CDC34P49427 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CDC34P49427 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CDC34P49427 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC1.86□□□□□ -2.11
CDC34P49427 ELF2P3-201ENST00000445099 1506 ntBASIC1.86□□□□□ -2.11
CDC34P49427 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CDC34P49427 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 160.5 ms