Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
RPL28P46779 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
RPL28P46779 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
RPL28P46779 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.58□□□□□ -2.16
RPL28P46779 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.58□□□□□ -2.16
RPL28P46779 DDX10P1-201ENST00000448545 1933 ntBASIC1.58□□□□□ -2.16
RPL28P46779 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
RPL28P46779 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.57□□□□□ -2.16
RPL28P46779 AC005539.1-201ENST00000443768 1479 ntBASIC1.57□□□□□ -2.16
RPL28P46779 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.57□□□□□ -2.16
RPL28P46779 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
RPL28P46779 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
RPL28P46779 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
RPL28P46779 Y_RNA.25-201ENST00000362528 102 ntBASIC1.57□□□□□ -2.16
RPL28P46779 RNU5E-8P-201ENST00000363502 116 ntBASIC1.57□□□□□ -2.16
RPL28P46779 SNORA5B-201ENST00000363786 132 ntBASIC1.57□□□□□ -2.16
RPL28P46779 RNU6-609P-201ENST00000365459 107 ntBASIC1.57□□□□□ -2.16
RPL28P46779 RNU6-354P-201ENST00000383862 107 ntBASIC1.57□□□□□ -2.16
RPL28P46779 RNU6-610P-201ENST00000384264 107 ntBASIC1.57□□□□□ -2.16
RPL28P46779 MIR524-201ENST00000385242 87 ntBASIC1.57□□□□□ -2.16
RPL28P46779 AL592148.1-201ENST00000413568 445 ntBASIC1.57□□□□□ -2.16
RPL28P46779 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC1.57□□□□□ -2.16
RPL28P46779 HMGB1P49-201ENST00000418882 569 ntBASIC1.57□□□□□ -2.16
RPL28P46779 AC091390.3-201ENST00000426478 338 ntBASIC1.57□□□□□ -2.16
RPL28P46779 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.57□□□□□ -2.16
RPL28P46779 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC1.57□□□□□ -2.16
RPL28P46779 Z80107.1-201ENST00000436830 412 ntBASIC1.57□□□□□ -2.16
RPL28P46779 OR10R1P-201ENST00000441524 1141 ntBASIC1.57□□□□□ -2.16
RPL28P46779 AC025750.2-201ENST00000442609 450 ntBASIC1.57□□□□□ -2.16
RPL28P46779 AP000936.2-201ENST00000447151 681 ntBASIC1.57□□□□□ -2.16
RPL28P46779 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC1.57□□□□□ -2.16
RPL28P46779 TRGVB-201ENST00000453257 471 ntBASIC1.57□□□□□ -2.16
RPL28P46779 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.57□□□□□ -2.16
RPL28P46779 MTCO3P11-201ENST00000455103 774 ntBASIC1.57□□□□□ -2.16
RPL28P46779 RPL23AP45-201ENST00000476406 468 ntBASIC1.57□□□□□ -2.16
RPL28P46779 RN7SL432P-201ENST00000484057 298 ntBASIC1.57□□□□□ -2.16
RPL28P46779 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.57□□□□□ -2.16
RPL28P46779 TMEM251P1-201ENST00000503717 318 ntBASIC1.57□□□□□ -2.16
RPL28P46779 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.57□□□□□ -2.16
RPL28P46779 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC1.57□□□□□ -2.16
RPL28P46779 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.57□□□□□ -2.16
RPL28P46779 NDUFS5P6-201ENST00000529136 295 ntBASIC1.57□□□□□ -2.16
RPL28P46779 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.57□□□□□ -2.16
RPL28P46779 AP000889.2-201ENST00000532684 490 ntBASIC1.57□□□□□ -2.16
RPL28P46779 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
RPL28P46779 AC243972.3-201ENST00000539655 198 ntBASIC1.57□□□□□ -2.16
RPL28P46779 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC1.57□□□□□ -2.16
RPL28P46779 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.57□□□□□ -2.16
RPL28P46779 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.57□□□□□ -2.16
RPL28P46779 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.57□□□□□ -2.16
RPL28P46779 AGGF1P5-201ENST00000567900 919 ntBASIC1.57□□□□□ -2.16
RPL28P46779 RPL23AP84-201ENST00000571193 464 ntBASIC1.57□□□□□ -2.16
RPL28P46779 MIR3200-201ENST00000580767 85 ntBASIC1.57□□□□□ -2.16
RPL28P46779 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.57□□□□□ -2.16
RPL28P46779 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.57□□□□□ -2.16
RPL28P46779 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.57□□□□□ -2.16
RPL28P46779 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.57□□□□□ -2.16
RPL28P46779 AC067747.1-201ENST00000608026 250 ntBASIC1.57□□□□□ -2.16
RPL28P46779 AC020658.4-201ENST00000613987 684 ntBASIC1.57□□□□□ -2.16
RPL28P46779 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.57□□□□□ -2.16
RPL28P46779 AL157770.1-201ENST00000623049 439 ntBASIC1.57□□□□□ -2.16
RPL28P46779 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.57□□□□□ -2.16
RPL28P46779 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC1.57□□□□□ -2.16
RPL28P46779 MIR4275-201ENST00000636486 87 ntBASIC1.57□□□□□ -2.16
RPL28P46779 MIR1322-201ENST00000638013 71 ntBASIC1.57□□□□□ -2.16
RPL28P46779 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.57□□□□□ -2.16
RPL28P46779 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
RPL28P46779 MTND4P27-201ENST00000450813 1354 ntBASIC1.57□□□□□ -2.16
RPL28P46779 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
RPL28P46779 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.57□□□□□ -2.16
RPL28P46779 MTND4P1-201ENST00000457501 1466 ntBASIC1.56□□□□□ -2.16
RPL28P46779 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
RPL28P46779 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
RPL28P46779 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
RPL28P46779 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
RPL28P46779 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
RPL28P46779 FTLP6-201ENST00000355274 422 ntBASIC1.56□□□□□ -2.16
RPL28P46779 RNU6-216P-201ENST00000363282 104 ntBASIC1.56□□□□□ -2.16
RPL28P46779 RNU6-525P-201ENST00000363685 104 ntBASIC1.56□□□□□ -2.16
RPL28P46779 SNORA38-201ENST00000363946 132 ntBASIC1.56□□□□□ -2.16
RPL28P46779 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.56□□□□□ -2.16
RPL28P46779 RNU4-52P-201ENST00000384209 138 ntBASIC1.56□□□□□ -2.16
RPL28P46779 Y_RNA.548-201ENST00000384656 105 ntBASIC1.56□□□□□ -2.16
RPL28P46779 RNU2-33P-201ENST00000410344 192 ntBASIC1.56□□□□□ -2.16
RPL28P46779 HMGB3P2-201ENST00000411913 584 ntBASIC1.56□□□□□ -2.16
RPL28P46779 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.56□□□□□ -2.16
RPL28P46779 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
RPL28P46779 HMGN2P38-201ENST00000423806 265 ntBASIC1.56□□□□□ -2.16
RPL28P46779 ZNF863P-201ENST00000426746 417 ntBASIC1.56□□□□□ -2.16
RPL28P46779 AC008850.1-201ENST00000427546 362 ntBASIC1.56□□□□□ -2.16
RPL28P46779 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.56□□□□□ -2.16
RPL28P46779 RPS15AP5-201ENST00000436276 388 ntBASIC1.56□□□□□ -2.16
RPL28P46779 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.56□□□□□ -2.16
RPL28P46779 AC092427.1-201ENST00000439177 601 ntBASIC1.56□□□□□ -2.16
RPL28P46779 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.56□□□□□ -2.16
RPL28P46779 ANKRD26P4-201ENST00000455755 950 ntBASIC1.56□□□□□ -2.16
RPL28P46779 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
RPL28P46779 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.56□□□□□ -2.16
RPL28P46779 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC1.56□□□□□ -2.16
RPL28P46779 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms