Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC097468.3-201ENST00000607956 456 ntBASIC2.98□□□□□ -1.93
BRCC3P46736 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
BRCC3P46736 AC006111.3-201ENST00000622137 383 ntBASIC2.98□□□□□ -1.93
BRCC3P46736 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
BRCC3P46736 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
BRCC3P46736 AC093831.2-201ENST00000624393 3427 ntBASIC2.98□□□□□ -1.93
BRCC3P46736 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.98□□□□□ -1.93
BRCC3P46736 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
BRCC3P46736 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.97□□□□□ -1.93
BRCC3P46736 AL136360.1-201ENST00000503377 1900 ntBASIC2.97□□□□□ -1.93
BRCC3P46736 AL513185.3-201ENST00000433335 1300 ntBASIC2.97□□□□□ -1.93
BRCC3P46736 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
BRCC3P46736 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
BRCC3P46736 FTLP6-201ENST00000355274 422 ntBASIC2.97□□□□□ -1.93
BRCC3P46736 MIR449A-201ENST00000362113 91 ntBASIC2.97□□□□□ -1.93
BRCC3P46736 RNU6-462P-201ENST00000362659 105 ntBASIC2.97□□□□□ -1.93
BRCC3P46736 RNU6-173P-201ENST00000364215 104 ntBASIC2.97□□□□□ -1.93
BRCC3P46736 SNORD116-8-201ENST00000384365 95 ntBASIC2.97□□□□□ -1.93
BRCC3P46736 Y_RNA.560-201ENST00000384689 102 ntBASIC2.97□□□□□ -1.93
BRCC3P46736 RNU6-882P-201ENST00000391025 103 ntBASIC2.97□□□□□ -1.93
BRCC3P46736 RN7SKP58-201ENST00000411010 305 ntBASIC2.97□□□□□ -1.93
BRCC3P46736 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.97□□□□□ -1.93
BRCC3P46736 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.97□□□□□ -1.93
BRCC3P46736 AC009518.2-201ENST00000418056 731 ntBASIC2.97□□□□□ -1.93
BRCC3P46736 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.97□□□□□ -1.93
BRCC3P46736 AL365203.2-201ENST00000423444 196 ntBASIC2.97□□□□□ -1.93
BRCC3P46736 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.97□□□□□ -1.93
BRCC3P46736 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.97□□□□□ -1.93
BRCC3P46736 HMGN2P20-201ENST00000437531 273 ntBASIC2.97□□□□□ -1.93
BRCC3P46736 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.97□□□□□ -1.93
BRCC3P46736 RPL21P8-201ENST00000465083 535 ntBASIC2.97□□□□□ -1.93
BRCC3P46736 BZW1P2-201ENST00000473537 826 ntBASIC2.97□□□□□ -1.93
BRCC3P46736 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
BRCC3P46736 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.97□□□□□ -1.93
BRCC3P46736 SNORA31.26-201ENST00000517250 137 ntBASIC2.97□□□□□ -1.93
BRCC3P46736 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
BRCC3P46736 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
BRCC3P46736 OR6C7P-201ENST00000547875 934 ntBASIC2.97□□□□□ -1.93
BRCC3P46736 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.97□□□□□ -1.93
BRCC3P46736 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.97□□□□□ -1.93
BRCC3P46736 AC002400.1-201ENST00000569310 726 ntBASIC2.97□□□□□ -1.93
BRCC3P46736 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.97□□□□□ -1.93
BRCC3P46736 AC008088.1-201ENST00000580993 280 ntBASIC2.97□□□□□ -1.93
BRCC3P46736 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.97□□□□□ -1.93
BRCC3P46736 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.97□□□□□ -1.93
BRCC3P46736 AL353997.4-201ENST00000586196 166 ntBASIC2.97□□□□□ -1.93
BRCC3P46736 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.97□□□□□ -1.93
BRCC3P46736 WISP1-OT1-201ENST00000602893 642 ntBASIC2.97□□□□□ -1.93
BRCC3P46736 AL109653.1-201ENST00000603091 248 ntBASIC2.97□□□□□ -1.93
BRCC3P46736 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.97□□□□□ -1.93
BRCC3P46736 DUXAP11-201ENST00000603858 526 ntBASIC2.97□□□□□ -1.93
BRCC3P46736 AC004223.4-201ENST00000612426 332 ntBASIC2.97□□□□□ -1.93
BRCC3P46736 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.97□□□□□ -1.93
BRCC3P46736 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.97□□□□□ -1.93
BRCC3P46736 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.97□□□□□ -1.93
BRCC3P46736 AC068057.2-201ENST00000624047 895 ntBASIC2.97□□□□□ -1.93
BRCC3P46736 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.97□□□□□ -1.93
BRCC3P46736 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.97□□□□□ -1.93
BRCC3P46736 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
BRCC3P46736 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.97□□□□□ -1.93
BRCC3P46736 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.97□□□□□ -1.93
BRCC3P46736 MTND5P7-201ENST00000413558 1798 ntBASIC2.97□□□□□ -1.93
BRCC3P46736 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.97□□□□□ -1.93
BRCC3P46736 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.93
BRCC3P46736 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
BRCC3P46736 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.96□□□□□ -1.94
BRCC3P46736 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
BRCC3P46736 RNU6-500P-201ENST00000362349 107 ntBASIC2.96□□□□□ -1.94
BRCC3P46736 SNORA51.4-201ENST00000364993 124 ntBASIC2.96□□□□□ -1.94
BRCC3P46736 RNU6-359P-201ENST00000365466 108 ntBASIC2.96□□□□□ -1.94
BRCC3P46736 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.96□□□□□ -1.94
BRCC3P46736 RNU6-253P-201ENST00000384730 105 ntBASIC2.96□□□□□ -1.94
BRCC3P46736 MIR135A2-201ENST00000384854 100 ntBASIC2.96□□□□□ -1.94
BRCC3P46736 AL591034.1-201ENST00000407447 340 ntBASIC2.96□□□□□ -1.94
BRCC3P46736 YPEL5P1-201ENST00000419731 367 ntBASIC2.96□□□□□ -1.94
BRCC3P46736 BX119904.4-201ENST00000424402 301 ntBASIC2.96□□□□□ -1.94
BRCC3P46736 AC019097.1-201ENST00000424783 735 ntBASIC2.96□□□□□ -1.94
BRCC3P46736 AC063976.3-201ENST00000426849 329 ntBASIC2.96□□□□□ -1.94
BRCC3P46736 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.96□□□□□ -1.94
BRCC3P46736 AL121871.1-201ENST00000443413 436 ntBASIC2.96□□□□□ -1.94
BRCC3P46736 OR6K5P-201ENST00000447050 945 ntBASIC2.96□□□□□ -1.94
BRCC3P46736 AC072039.1-201ENST00000477611 581 ntBASIC2.96□□□□□ -1.94
BRCC3P46736 RN7SL432P-201ENST00000484057 298 ntBASIC2.96□□□□□ -1.94
BRCC3P46736 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.96□□□□□ -1.94
BRCC3P46736 AC005178.1-201ENST00000508392 440 ntBASIC2.96□□□□□ -1.94
BRCC3P46736 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.96□□□□□ -1.94
BRCC3P46736 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.96□□□□□ -1.94
BRCC3P46736 MED28P6-201ENST00000558776 231 ntBASIC2.96□□□□□ -1.94
BRCC3P46736 AC012435.1-202ENST00000568772 240 ntBASIC2.96□□□□□ -1.94
BRCC3P46736 MIR3915-201ENST00000578518 97 ntBASIC2.96□□□□□ -1.94
BRCC3P46736 NRBF2P5-201ENST00000603087 788 ntBASIC2.96□□□□□ -1.94
BRCC3P46736 AP001330.4-201ENST00000604350 154 ntBASIC2.96□□□□□ -1.94
BRCC3P46736 AC107214.2-201ENST00000608204 634 ntBASIC2.96□□□□□ -1.94
BRCC3P46736 AC103710.4-201ENST00000609301 899 ntBASIC2.96□□□□□ -1.94
BRCC3P46736 AC095031.1-201ENST00000623685 672 ntBASIC2.96□□□□□ -1.94
BRCC3P46736 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.96□□□□□ -1.94
BRCC3P46736 CRYM-AS1-204ENST00000637983 556 ntBASIC2.96□□□□□ -1.94
BRCC3P46736 MTND5P19-201ENST00000424872 1794 ntBASIC2.96□□□□□ -1.94
BRCC3P46736 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.96□□□□□ -1.94
BRCC3P46736 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms