Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.41□□□□□ -1.7
GDNFP39905 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.41□□□□□ -1.7
GDNFP39905 AC005868.1-201ENST00000536421 331 ntBASIC4.41□□□□□ -1.7
GDNFP39905 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.41□□□□□ -1.7
GDNFP39905 AMZ2P1-203ENST00000565833 850 ntBASIC4.41□□□□□ -1.7
GDNFP39905 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.41□□□□□ -1.7
GDNFP39905 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.41□□□□□ -1.7
GDNFP39905 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.41□□□□□ -1.7
GDNFP39905 RN7SL753P-201ENST00000581238 290 ntBASIC4.41□□□□□ -1.7
GDNFP39905 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.41□□□□□ -1.7
GDNFP39905 AC011445.2-201ENST00000599274 173 ntBASIC4.41□□□□□ -1.7
GDNFP39905 AL355877.2-201ENST00000603670 358 ntBASIC4.41□□□□□ -1.7
GDNFP39905 MIR3976-201ENST00000606807 139 ntBASIC4.41□□□□□ -1.7
GDNFP39905 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.41□□□□□ -1.7
GDNFP39905 AC118658.2-201ENST00000618697 459 ntBASIC4.41□□□□□ -1.7
GDNFP39905 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.41□□□□□ -1.7
GDNFP39905 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
GDNFP39905 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
GDNFP39905 IQCB2P-201ENST00000401788 1633 ntBASIC4.41□□□□□ -1.7
GDNFP39905 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
GDNFP39905 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.41□□□□□ -1.7
GDNFP39905 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
GDNFP39905 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
GDNFP39905 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
GDNFP39905 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
GDNFP39905 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
GDNFP39905 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
GDNFP39905 AC139713.2-215ENST00000641428 5037 ntBASIC4.4□□□□□ -1.7
GDNFP39905 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
GDNFP39905 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
GDNFP39905 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
GDNFP39905 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
GDNFP39905 MIR323A-201ENST00000362199 86 ntBASIC4.4□□□□□ -1.71
GDNFP39905 Y_RNA.54-201ENST00000362766 105 ntBASIC4.4□□□□□ -1.71
GDNFP39905 Y_RNA.183-201ENST00000363882 113 ntBASIC4.4□□□□□ -1.71
GDNFP39905 RNU6-662P-201ENST00000384253 104 ntBASIC4.4□□□□□ -1.71
GDNFP39905 SAR1AP2-201ENST00000392696 594 ntBASIC4.4□□□□□ -1.71
GDNFP39905 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
GDNFP39905 RNU6-325P-201ENST00000411132 105 ntBASIC4.4□□□□□ -1.71
GDNFP39905 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.4□□□□□ -1.71
GDNFP39905 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.4□□□□□ -1.71
GDNFP39905 BX842559.1-201ENST00000419615 532 ntBASIC4.4□□□□□ -1.71
GDNFP39905 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.4□□□□□ -1.71
GDNFP39905 AC092423.1-201ENST00000430165 186 ntBASIC4.4□□□□□ -1.71
GDNFP39905 CYCSP6-201ENST00000434498 302 ntBASIC4.4□□□□□ -1.71
GDNFP39905 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.4□□□□□ -1.71
GDNFP39905 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.4□□□□□ -1.71
GDNFP39905 RPEP5-201ENST00000441137 268 ntBASIC4.4□□□□□ -1.71
GDNFP39905 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.4□□□□□ -1.71
GDNFP39905 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.4□□□□□ -1.71
GDNFP39905 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
GDNFP39905 Z92846.1-201ENST00000456203 268 ntBASIC4.4□□□□□ -1.71
GDNFP39905 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.4□□□□□ -1.71
GDNFP39905 RN7SL174P-201ENST00000475578 289 ntBASIC4.4□□□□□ -1.71
GDNFP39905 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.4□□□□□ -1.71
GDNFP39905 AC008958.1-201ENST00000511047 682 ntBASIC4.4□□□□□ -1.71
GDNFP39905 AC113155.1-201ENST00000511141 769 ntBASIC4.4□□□□□ -1.71
GDNFP39905 AC034114.1-201ENST00000520293 285 ntBASIC4.4□□□□□ -1.71
GDNFP39905 CYCSP40-201ENST00000575927 294 ntBASIC4.4□□□□□ -1.71
GDNFP39905 AC068790.4-201ENST00000602474 263 ntBASIC4.4□□□□□ -1.71
GDNFP39905 MIR15A-201ENST00000607334 83 ntBASIC4.4□□□□□ -1.71
GDNFP39905 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.4□□□□□ -1.71
GDNFP39905 SNORD39.4-201ENST00000620099 78 ntBASIC4.4□□□□□ -1.71
GDNFP39905 AL031601.2-202ENST00000622650 282 ntBASIC4.4□□□□□ -1.71
GDNFP39905 AC127459.3-201ENST00000624328 466 ntBASIC4.4□□□□□ -1.71
GDNFP39905 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.4□□□□□ -1.71
GDNFP39905 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
GDNFP39905 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.4□□□□□ -1.71
GDNFP39905 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
GDNFP39905 AL450326.2-201ENST00000421913 1962 ntBASIC4.4□□□□□ -1.71
GDNFP39905 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.4□□□□□ -1.71
GDNFP39905 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
GDNFP39905 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.39□□□□□ -1.71
GDNFP39905 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.39□□□□□ -1.71
GDNFP39905 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
GDNFP39905 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
GDNFP39905 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
GDNFP39905 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.39□□□□□ -1.71
GDNFP39905 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
GDNFP39905 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.39□□□□□ -1.71
GDNFP39905 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
GDNFP39905 AL391987.6-201ENST00000305671 199 ntBASIC4.39□□□□□ -1.71
GDNFP39905 RNA5SP132-201ENST00000364725 118 ntBASIC4.39□□□□□ -1.71
GDNFP39905 Y_RNA.533-201ENST00000384596 114 ntBASIC4.39□□□□□ -1.71
GDNFP39905 MT-TC-201ENST00000387405 66 ntBASIC4.39□□□□□ -1.71
GDNFP39905 PCNPP3-201ENST00000393579 471 ntBASIC4.39□□□□□ -1.71
GDNFP39905 AL603910.2-201ENST00000407268 136 ntBASIC4.39□□□□□ -1.71
GDNFP39905 AL391219.1-201ENST00000422570 483 ntBASIC4.39□□□□□ -1.71
GDNFP39905 CHEK2P5-201ENST00000423877 246 ntBASIC4.39□□□□□ -1.71
GDNFP39905 COX6CP13-201ENST00000428703 226 ntBASIC4.39□□□□□ -1.71
GDNFP39905 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.39□□□□□ -1.71
GDNFP39905 GAPDHP25-201ENST00000447061 1001 ntBASIC4.39□□□□□ -1.71
GDNFP39905 PTMAP3-201ENST00000447474 330 ntBASIC4.39□□□□□ -1.71
GDNFP39905 PPIAP20-201ENST00000449839 135 ntBASIC4.39□□□□□ -1.71
GDNFP39905 BX276092.4-201ENST00000452056 248 ntBASIC4.39□□□□□ -1.71
GDNFP39905 HMGN2P13-201ENST00000476476 274 ntBASIC4.39□□□□□ -1.71
GDNFP39905 RPL7P23-201ENST00000493874 747 ntBASIC4.39□□□□□ -1.71
GDNFP39905 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.39□□□□□ -1.71
GDNFP39905 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.39□□□□□ -1.71
GDNFP39905 NDUFB4P9-201ENST00000511646 388 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms