Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 AC135507.1-201ENST00000607214 561 ntBASIC1.71□□□□□ -2.14
HLA-DMBP28068 AC245884.12-201ENST00000615364 59 ntBASIC1.71□□□□□ -2.14
HLA-DMBP28068 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.71□□□□□ -2.14
HLA-DMBP28068 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HLA-DMBP28068 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.7□□□□□ -2.14
HLA-DMBP28068 MTND4P1-201ENST00000457501 1466 ntBASIC1.7□□□□□ -2.14
HLA-DMBP28068 Z99496.1-201ENST00000469424 1477 ntBASIC1.7□□□□□ -2.14
HLA-DMBP28068 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
HLA-DMBP28068 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HLA-DMBP28068 RNU6-76P-201ENST00000384060 104 ntBASIC1.7□□□□□ -2.14
HLA-DMBP28068 RNU6-549P-201ENST00000384433 107 ntBASIC1.7□□□□□ -2.14
HLA-DMBP28068 AL356131.1-201ENST00000405826 414 ntBASIC1.7□□□□□ -2.14
HLA-DMBP28068 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.7□□□□□ -2.14
HLA-DMBP28068 AL135786.1-201ENST00000415892 214 ntBASIC1.7□□□□□ -2.14
HLA-DMBP28068 THAP5P1-201ENST00000439089 262 ntBASIC1.7□□□□□ -2.14
HLA-DMBP28068 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HLA-DMBP28068 AL353691.1-201ENST00000451332 387 ntBASIC1.7□□□□□ -2.14
HLA-DMBP28068 RNU7-26P-201ENST00000458980 63 ntBASIC1.7□□□□□ -2.14
HLA-DMBP28068 AC092757.1-201ENST00000467293 467 ntBASIC1.7□□□□□ -2.14
HLA-DMBP28068 GTF2IP9-201ENST00000502460 301 ntBASIC1.7□□□□□ -2.14
HLA-DMBP28068 GZMAP1-201ENST00000503054 631 ntBASIC1.7□□□□□ -2.14
HLA-DMBP28068 AC008427.1-201ENST00000503102 655 ntBASIC1.7□□□□□ -2.14
HLA-DMBP28068 AC091860.1-201ENST00000505723 432 ntBASIC1.7□□□□□ -2.14
HLA-DMBP28068 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.7□□□□□ -2.14
HLA-DMBP28068 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.7□□□□□ -2.14
HLA-DMBP28068 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.7□□□□□ -2.14
HLA-DMBP28068 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.7□□□□□ -2.14
HLA-DMBP28068 SCARNA15.2-201ENST00000516409 127 ntBASIC1.7□□□□□ -2.14
HLA-DMBP28068 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HLA-DMBP28068 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.7□□□□□ -2.14
HLA-DMBP28068 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.7□□□□□ -2.14
HLA-DMBP28068 MTCYBP27-201ENST00000555160 670 ntBASIC1.7□□□□□ -2.14
HLA-DMBP28068 AC093510.2-201ENST00000562820 896 ntBASIC1.7□□□□□ -2.14
HLA-DMBP28068 AC009063.1-201ENST00000563342 702 ntBASIC1.7□□□□□ -2.14
HLA-DMBP28068 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC1.7□□□□□ -2.14
HLA-DMBP28068 AC009127.3-201ENST00000570531 403 ntBASIC1.7□□□□□ -2.14
HLA-DMBP28068 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.7□□□□□ -2.14
HLA-DMBP28068 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.7□□□□□ -2.14
HLA-DMBP28068 AP002906.1-201ENST00000603405 233 ntBASIC1.7□□□□□ -2.14
HLA-DMBP28068 AL031601.2-202ENST00000622650 282 ntBASIC1.7□□□□□ -2.14
HLA-DMBP28068 AC007785.2-201ENST00000598627 1916 ntBASIC1.7□□□□□ -2.14
HLA-DMBP28068 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.69□□□□□ -2.14
HLA-DMBP28068 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
HLA-DMBP28068 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
HLA-DMBP28068 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
HLA-DMBP28068 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
HLA-DMBP28068 RNU5A-1-201ENST00000362698 116 ntBASIC1.69□□□□□ -2.14
HLA-DMBP28068 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
HLA-DMBP28068 RNU4-52P-201ENST00000384209 138 ntBASIC1.69□□□□□ -2.14
HLA-DMBP28068 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
HLA-DMBP28068 AL591416.1-201ENST00000404015 867 ntBASIC1.69□□□□□ -2.14
HLA-DMBP28068 UBE2V1P15-201ENST00000407776 448 ntBASIC1.69□□□□□ -2.14
HLA-DMBP28068 SNORA3.2-201ENST00000408221 125 ntBASIC1.69□□□□□ -2.14
HLA-DMBP28068 U3.40-201ENST00000408706 208 ntBASIC1.69□□□□□ -2.14
HLA-DMBP28068 RNU2-28P-201ENST00000410457 189 ntBASIC1.69□□□□□ -2.14
HLA-DMBP28068 RN7SKP284-201ENST00000411002 343 ntBASIC1.69□□□□□ -2.14
HLA-DMBP28068 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.69□□□□□ -2.14
HLA-DMBP28068 HMGB3P2-201ENST00000411913 584 ntBASIC1.69□□□□□ -2.14
HLA-DMBP28068 AL592310.1-201ENST00000414330 671 ntBASIC1.69□□□□□ -2.14
HLA-DMBP28068 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.69□□□□□ -2.14
HLA-DMBP28068 AC092047.1-201ENST00000424997 240 ntBASIC1.69□□□□□ -2.14
HLA-DMBP28068 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.69□□□□□ -2.14
HLA-DMBP28068 IFNA11P-201ENST00000446352 526 ntBASIC1.69□□□□□ -2.14
HLA-DMBP28068 AL353705.4-201ENST00000449661 238 ntBASIC1.69□□□□□ -2.14
HLA-DMBP28068 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.69□□□□□ -2.14
HLA-DMBP28068 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.69□□□□□ -2.14
HLA-DMBP28068 XACT-201ENST00000468762 497 ntTSL 5 BASIC1.69□□□□□ -2.14
HLA-DMBP28068 AC013828.1-201ENST00000481845 158 ntBASIC1.69□□□□□ -2.14
HLA-DMBP28068 AC104435.1-201ENST00000483483 166 ntBASIC1.69□□□□□ -2.14
HLA-DMBP28068 BOLA3P3-201ENST00000505182 232 ntBASIC1.69□□□□□ -2.14
HLA-DMBP28068 SUMO2P6-201ENST00000505273 288 ntBASIC1.69□□□□□ -2.14
HLA-DMBP28068 AC010468.3-201ENST00000508225 458 ntBASIC1.69□□□□□ -2.14
HLA-DMBP28068 AC008549.1-201ENST00000512900 643 ntBASIC1.69□□□□□ -2.14
HLA-DMBP28068 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.69□□□□□ -2.14
HLA-DMBP28068 RNU6-1102P-201ENST00000516149 96 ntBASIC1.69□□□□□ -2.14
HLA-DMBP28068 RNA5SP281-201ENST00000516504 135 ntBASIC1.69□□□□□ -2.14
HLA-DMBP28068 MIR514B-201ENST00000516774 80 ntBASIC1.69□□□□□ -2.14
HLA-DMBP28068 SCARNA11.3-201ENST00000517276 130 ntBASIC1.69□□□□□ -2.14
HLA-DMBP28068 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.69□□□□□ -2.14
HLA-DMBP28068 MTATP6P25-201ENST00000574491 261 ntBASIC1.69□□□□□ -2.14
HLA-DMBP28068 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.69□□□□□ -2.14
HLA-DMBP28068 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.69□□□□□ -2.14
HLA-DMBP28068 BNIP3P24-201ENST00000593398 557 ntBASIC1.69□□□□□ -2.14
HLA-DMBP28068 AC068313.1-201ENST00000604028 1008 ntBASIC1.69□□□□□ -2.14
HLA-DMBP28068 AL121917.1-203ENST00000605534 577 ntBASIC1.69□□□□□ -2.14
HLA-DMBP28068 MIR7515-201ENST00000637837 67 ntBASIC1.69□□□□□ -2.14
HLA-DMBP28068 CCT4P2-201ENST00000233836 1548 ntBASIC1.69□□□□□ -2.14
HLA-DMBP28068 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.69□□□□□ -2.14
HLA-DMBP28068 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
HLA-DMBP28068 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HLA-DMBP28068 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.68□□□□□ -2.14
HLA-DMBP28068 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.68□□□□□ -2.14
HLA-DMBP28068 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HLA-DMBP28068 RNU6-650P-201ENST00000365658 111 ntBASIC1.68□□□□□ -2.14
HLA-DMBP28068 RNU1-73P-201ENST00000383971 164 ntBASIC1.68□□□□□ -2.14
HLA-DMBP28068 MIR514A1-201ENST00000385133 98 ntBASIC1.68□□□□□ -2.14
HLA-DMBP28068 MIR221-201ENST00000385135 110 ntBASIC1.68□□□□□ -2.14
HLA-DMBP28068 AL355497.1-201ENST00000406262 551 ntBASIC1.68□□□□□ -2.14
HLA-DMBP28068 RNA5SP425-201ENST00000410336 112 ntBASIC1.68□□□□□ -2.14
HLA-DMBP28068 HMGB1P11-201ENST00000413899 637 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms