Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 MIR558-201ENST00000384920 94 ntBASIC4.11□□□□□ -1.75
POLR2AP24928 MIR92A2-201ENST00000385299 75 ntBASIC4.11□□□□□ -1.75
POLR2AP24928 U3.19-201ENST00000390893 196 ntBASIC4.11□□□□□ -1.75
POLR2AP24928 RNU2-62P-201ENST00000410868 191 ntBASIC4.11□□□□□ -1.75
POLR2AP24928 AC234782.4-201ENST00000417646 1048 ntBASIC4.11□□□□□ -1.75
POLR2AP24928 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.11□□□□□ -1.75
POLR2AP24928 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.11□□□□□ -1.75
POLR2AP24928 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.11□□□□□ -1.75
POLR2AP24928 C1DP4-201ENST00000455429 424 ntBASIC4.11□□□□□ -1.75
POLR2AP24928 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.11□□□□□ -1.75
POLR2AP24928 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC4.11□□□□□ -1.75
POLR2AP24928 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.11□□□□□ -1.75
POLR2AP24928 AC010587.1-201ENST00000505809 469 ntBASIC4.11□□□□□ -1.75
POLR2AP24928 FCF1P8-201ENST00000510322 597 ntBASIC4.11□□□□□ -1.75
POLR2AP24928 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.11□□□□□ -1.75
POLR2AP24928 RN7SKP219-201ENST00000516825 296 ntBASIC4.11□□□□□ -1.75
POLR2AP24928 OR5B19P-201ENST00000531766 928 ntBASIC4.11□□□□□ -1.75
POLR2AP24928 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.11□□□□□ -1.75
POLR2AP24928 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.11□□□□□ -1.75
POLR2AP24928 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.11□□□□□ -1.75
POLR2AP24928 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.11□□□□□ -1.75
POLR2AP24928 MTND6P33-201ENST00000571794 183 ntBASIC4.11□□□□□ -1.75
POLR2AP24928 Z84480.1-201ENST00000605131 311 ntBASIC4.11□□□□□ -1.75
POLR2AP24928 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.11□□□□□ -1.75
POLR2AP24928 AC019193.3-201ENST00000609144 554 ntBASIC4.11□□□□□ -1.75
POLR2AP24928 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
POLR2AP24928 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
POLR2AP24928 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
POLR2AP24928 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
POLR2AP24928 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
POLR2AP24928 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
POLR2AP24928 ZNF807-201ENST00000328088 1707 ntBASIC4.1□□□□□ -1.75
POLR2AP24928 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
POLR2AP24928 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
POLR2AP24928 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
POLR2AP24928 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
POLR2AP24928 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
POLR2AP24928 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
POLR2AP24928 Y_RNA.259-201ENST00000364619 101 ntBASIC4.1□□□□□ -1.75
POLR2AP24928 RPL31P52-201ENST00000407532 367 ntBASIC4.1□□□□□ -1.75
POLR2AP24928 MTHFD2P2-201ENST00000407725 247 ntBASIC4.1□□□□□ -1.75
POLR2AP24928 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.1□□□□□ -1.75
POLR2AP24928 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.1□□□□□ -1.75
POLR2AP24928 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.1□□□□□ -1.75
POLR2AP24928 AC126389.1-201ENST00000477436 290 ntBASIC4.1□□□□□ -1.75
POLR2AP24928 RPS3AP50-201ENST00000487064 803 ntBASIC4.1□□□□□ -1.75
POLR2AP24928 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC4.1□□□□□ -1.75
POLR2AP24928 OR5BN1P-201ENST00000532955 829 ntBASIC4.1□□□□□ -1.75
POLR2AP24928 AL121821.2-201ENST00000556081 394 ntBASIC4.1□□□□□ -1.75
POLR2AP24928 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.1□□□□□ -1.75
POLR2AP24928 AC004853.1-201ENST00000604902 698 ntBASIC4.1□□□□□ -1.75
POLR2AP24928 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
POLR2AP24928 7SK.10-201ENST00000621414 298 ntBASIC4.1□□□□□ -1.75
POLR2AP24928 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.1□□□□□ -1.75
POLR2AP24928 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
POLR2AP24928 AL035425.3-201ENST00000564206 4996 ntBASIC4.1□□□□□ -1.75
POLR2AP24928 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
POLR2AP24928 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
POLR2AP24928 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.1□□□□□ -1.75
POLR2AP24928 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.1□□□□□ -1.75
POLR2AP24928 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.1□□□□□ -1.75
POLR2AP24928 MTND5P3-201ENST00000438536 1800 ntBASIC4.1□□□□□ -1.75
POLR2AP24928 AC092435.4-201ENST00000623012 4159 ntBASIC4.09□□□□□ -1.75
POLR2AP24928 SAGE4P-201ENST00000442271 3381 ntBASIC4.09□□□□□ -1.75
POLR2AP24928 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.09□□□□□ -1.75
POLR2AP24928 RNA5SP432-201ENST00000362480 116 ntBASIC4.09□□□□□ -1.75
POLR2AP24928 Y_RNA.86-201ENST00000363020 111 ntBASIC4.09□□□□□ -1.75
POLR2AP24928 RNU1-18P-201ENST00000363062 164 ntBASIC4.09□□□□□ -1.75
POLR2AP24928 Y_RNA.445-201ENST00000384168 102 ntBASIC4.09□□□□□ -1.75
POLR2AP24928 RNU6-74P-201ENST00000384235 107 ntBASIC4.09□□□□□ -1.75
POLR2AP24928 RNU6-769P-201ENST00000384407 104 ntBASIC4.09□□□□□ -1.75
POLR2AP24928 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
POLR2AP24928 AL136116.1-201ENST00000403591 381 ntBASIC4.09□□□□□ -1.75
POLR2AP24928 MTND2P23-201ENST00000422990 651 ntBASIC4.09□□□□□ -1.75
POLR2AP24928 RPL23AP15-201ENST00000450202 459 ntBASIC4.09□□□□□ -1.75
POLR2AP24928 TRBV12-2-201ENST00000489763 344 ntBASIC4.09□□□□□ -1.75
POLR2AP24928 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.09□□□□□ -1.75
POLR2AP24928 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.09□□□□□ -1.75
POLR2AP24928 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.09□□□□□ -1.75
POLR2AP24928 PDCD5P1-201ENST00000543528 309 ntBASIC4.09□□□□□ -1.75
POLR2AP24928 HIF1AP1-201ENST00000553642 175 ntBASIC4.09□□□□□ -1.75
POLR2AP24928 LARP7P3-201ENST00000579888 337 ntBASIC4.09□□□□□ -1.75
POLR2AP24928 POLR3GP2-201ENST00000588366 668 ntBASIC4.09□□□□□ -1.75
POLR2AP24928 AP001429.1-201ENST00000602568 530 ntBASIC4.09□□□□□ -1.75
POLR2AP24928 AC138649.5-201ENST00000637456 137 ntBASIC4.09□□□□□ -1.75
POLR2AP24928 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.09□□□□□ -1.75
POLR2AP24928 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
POLR2AP24928 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
POLR2AP24928 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.75
POLR2AP24928 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
POLR2AP24928 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.09□□□□□ -1.76
POLR2AP24928 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
POLR2AP24928 RNU5E-1-201ENST00000362477 120 ntBASIC4.09□□□□□ -1.76
POLR2AP24928 RNY1P12-201ENST00000364251 105 ntBASIC4.09□□□□□ -1.76
POLR2AP24928 RNU6-359P-201ENST00000365466 108 ntBASIC4.09□□□□□ -1.76
POLR2AP24928 RNU6-921P-201ENST00000384361 107 ntBASIC4.09□□□□□ -1.76
POLR2AP24928 ARF4P3-201ENST00000397387 509 ntBASIC4.09□□□□□ -1.76
POLR2AP24928 GNG5P5-201ENST00000420444 220 ntBASIC4.09□□□□□ -1.76
POLR2AP24928 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.09□□□□□ -1.76
POLR2AP24928 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.09□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms