Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AL139418.1-201ENST00000613613 177 ntBASIC3.52□□□□□ -1.85
BDNFP23560 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.52□□□□□ -1.85
BDNFP23560 AL031667.3-201ENST00000620124 655 ntBASIC3.52□□□□□ -1.85
BDNFP23560 AL356321.1-201ENST00000621360 228 ntBASIC3.52□□□□□ -1.85
BDNFP23560 MIR3651-201ENST00000630427 90 ntBASIC3.52□□□□□ -1.85
BDNFP23560 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
BDNFP23560 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
BDNFP23560 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.51□□□□□ -1.85
BDNFP23560 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
BDNFP23560 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
BDNFP23560 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
BDNFP23560 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
BDNFP23560 SNORD113-6-201ENST00000363345 75 ntBASIC3.51□□□□□ -1.85
BDNFP23560 SNORA9-201ENST00000384215 133 ntBASIC3.51□□□□□ -1.85
BDNFP23560 MIR491-201ENST00000384877 84 ntBASIC3.51□□□□□ -1.85
BDNFP23560 U3.19-201ENST00000390893 196 ntBASIC3.51□□□□□ -1.85
BDNFP23560 RNA5SP492-201ENST00000411330 114 ntBASIC3.51□□□□□ -1.85
BDNFP23560 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.51□□□□□ -1.85
BDNFP23560 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.51□□□□□ -1.85
BDNFP23560 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.51□□□□□ -1.85
BDNFP23560 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.51□□□□□ -1.85
BDNFP23560 RPS15AP5-201ENST00000436276 388 ntBASIC3.51□□□□□ -1.85
BDNFP23560 AL513043.1-201ENST00000439124 535 ntBASIC3.51□□□□□ -1.85
BDNFP23560 Z75741.1-201ENST00000446793 314 ntBASIC3.51□□□□□ -1.85
BDNFP23560 WASF1P1-201ENST00000447560 1131 ntBASIC3.51□□□□□ -1.85
BDNFP23560 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.51□□□□□ -1.85
BDNFP23560 RPL12P25-201ENST00000455592 494 ntBASIC3.51□□□□□ -1.85
BDNFP23560 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
BDNFP23560 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.51□□□□□ -1.85
BDNFP23560 SNORA3.4-201ENST00000515969 96 ntBASIC3.51□□□□□ -1.85
BDNFP23560 RNU6-64P-201ENST00000517119 105 ntBASIC3.51□□□□□ -1.85
BDNFP23560 AC107934.2-201ENST00000518653 310 ntBASIC3.51□□□□□ -1.85
BDNFP23560 NDUFB9P3-201ENST00000521269 501 ntBASIC3.51□□□□□ -1.85
BDNFP23560 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.51□□□□□ -1.85
BDNFP23560 AC006518.1-201ENST00000541449 943 ntBASIC3.51□□□□□ -1.85
BDNFP23560 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.51□□□□□ -1.85
BDNFP23560 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.51□□□□□ -1.85
BDNFP23560 AC015917.1-201ENST00000579654 510 ntBASIC3.51□□□□□ -1.85
BDNFP23560 CKS1BP3-201ENST00000600888 237 ntBASIC3.51□□□□□ -1.85
BDNFP23560 KC877982.1-201ENST00000602313 470 ntBASIC3.51□□□□□ -1.85
BDNFP23560 PRELID3BP8-201ENST00000604148 295 ntBASIC3.51□□□□□ -1.85
BDNFP23560 AC107952.2-201ENST00000606048 486 ntBASIC3.51□□□□□ -1.85
BDNFP23560 RNVU1-4-201ENST00000612985 164 ntBASIC3.51□□□□□ -1.85
BDNFP23560 AL050303.3-201ENST00000613704 284 ntBASIC3.51□□□□□ -1.85
BDNFP23560 AC012150.2-201ENST00000621300 544 ntBASIC3.51□□□□□ -1.85
BDNFP23560 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.51□□□□□ -1.85
BDNFP23560 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
BDNFP23560 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
BDNFP23560 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
BDNFP23560 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
BDNFP23560 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
BDNFP23560 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
BDNFP23560 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.5□□□□□ -1.85
BDNFP23560 RNU6-1200P-201ENST00000384162 107 ntBASIC3.5□□□□□ -1.85
BDNFP23560 MIR184-201ENST00000384962 84 ntBASIC3.5□□□□□ -1.85
BDNFP23560 RNU2-68P-201ENST00000410878 191 ntBASIC3.5□□□□□ -1.85
BDNFP23560 RPL26P27-201ENST00000414397 437 ntBASIC3.5□□□□□ -1.85
BDNFP23560 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.5□□□□□ -1.85
BDNFP23560 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.5□□□□□ -1.85
BDNFP23560 AL356968.1-201ENST00000416622 474 ntBASIC3.5□□□□□ -1.85
BDNFP23560 RPL7P37-201ENST00000425095 738 ntBASIC3.5□□□□□ -1.85
BDNFP23560 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.5□□□□□ -1.85
BDNFP23560 AC109583.1-201ENST00000432156 268 ntBASIC3.5□□□□□ -1.85
BDNFP23560 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.5□□□□□ -1.85
BDNFP23560 RPL23AP83-201ENST00000434984 473 ntBASIC3.5□□□□□ -1.85
BDNFP23560 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.5□□□□□ -1.85
BDNFP23560 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.5□□□□□ -1.85
BDNFP23560 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.5□□□□□ -1.85
BDNFP23560 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.5□□□□□ -1.85
BDNFP23560 RPS4XP2-201ENST00000458402 793 ntBASIC3.5□□□□□ -1.85
BDNFP23560 AC105252.1-201ENST00000503089 286 ntBASIC3.5□□□□□ -1.85
BDNFP23560 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
BDNFP23560 AC026427.2-201ENST00000506228 536 ntBASIC3.5□□□□□ -1.85
BDNFP23560 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
BDNFP23560 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.5□□□□□ -1.85
BDNFP23560 AL359212.1-201ENST00000556608 614 ntBASIC3.5□□□□□ -1.85
BDNFP23560 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.5□□□□□ -1.85
BDNFP23560 MIR3616-201ENST00000584070 92 ntBASIC3.5□□□□□ -1.85
BDNFP23560 NRBF2P5-201ENST00000603087 788 ntBASIC3.5□□□□□ -1.85
BDNFP23560 AC004805.2-201ENST00000605382 482 ntBASIC3.5□□□□□ -1.85
BDNFP23560 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.5□□□□□ -1.85
BDNFP23560 AC099506.2-201ENST00000623074 221 ntBASIC3.5□□□□□ -1.85
BDNFP23560 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.5□□□□□ -1.85
BDNFP23560 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
BDNFP23560 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.49□□□□□ -1.85
BDNFP23560 RNU1-70P-201ENST00000362618 164 ntBASIC3.49□□□□□ -1.85
BDNFP23560 SNORA38.1-201ENST00000364172 131 ntBASIC3.49□□□□□ -1.85
BDNFP23560 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
BDNFP23560 AL512633.1-201ENST00000399931 655 ntBASIC3.49□□□□□ -1.85
BDNFP23560 MTND4P13-201ENST00000402078 1023 ntBASIC3.49□□□□□ -1.85
BDNFP23560 AL357075.1-201ENST00000404107 726 ntBASIC3.49□□□□□ -1.85
BDNFP23560 AL021407.1-201ENST00000404531 386 ntBASIC3.49□□□□□ -1.85
BDNFP23560 RN7SKP285-201ENST00000410137 318 ntBASIC3.49□□□□□ -1.85
BDNFP23560 ELOCP17-201ENST00000414751 326 ntBASIC3.49□□□□□ -1.85
BDNFP23560 AC104651.1-201ENST00000427559 735 ntBASIC3.49□□□□□ -1.85
BDNFP23560 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.49□□□□□ -1.85
BDNFP23560 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.49□□□□□ -1.85
BDNFP23560 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.49□□□□□ -1.85
BDNFP23560 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.49□□□□□ -1.85
BDNFP23560 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms