Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 RNA5SP387-201ENST00000364226 106 ntBASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 RNU1-140P-201ENST00000365040 165 ntBASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 RNU6-741P-201ENST00000383889 107 ntBASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 RNU6-253P-201ENST00000384730 105 ntBASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 AL590004.2-201ENST00000404787 371 ntBASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 RN7SKP140-201ENST00000411196 284 ntBASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 RPS24P7-201ENST00000416921 246 ntBASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 MTND2P9-201ENST00000422293 931 ntBASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 AC091390.3-201ENST00000426478 338 ntBASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 AL445669.1-201ENST00000426743 755 ntBASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 DPPA2P1-201ENST00000428060 556 ntBASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 AC007919.1-201ENST00000429380 217 ntBASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 AL139132.1-201ENST00000431587 344 ntBASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 MRPL50P4-201ENST00000446432 475 ntBASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 OR6K1P-201ENST00000456766 971 ntBASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 AC026427.2-201ENST00000506228 536 ntBASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 HSPE1P23-201ENST00000509838 286 ntBASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 SCARNA13-201ENST00000516672 275 ntBASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 NRON-201ENST00000517270 370 ntBASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 AP001372.4-201ENST00000524889 472 ntBASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 AC013828.2-201ENST00000532487 235 ntBASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 MIR544B-201ENST00000582372 78 ntBASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 AC002545.1-201ENST00000592511 181 ntBASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 AC105148.1-201ENST00000604961 409 ntBASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 AC103710.4-201ENST00000609301 899 ntBASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 SDR42E1P2-201ENST00000614861 481 ntBASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 AL161629.2-201ENST00000615347 275 ntBASIC2.28□□□□□ -2.04
IGHV3-43DP0DP04 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 MTND5P33-201ENST00000571250 1450 ntBASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 AC092125.1-201ENST00000562568 1995 ntBASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 AC096644.4-201ENST00000563417 2912 ntBASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 MIR26A1-201ENST00000362205 77 ntBASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 SNORD113-6-201ENST00000363345 75 ntBASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 RNA5SP139-201ENST00000364340 117 ntBASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 DYNLT3P1-201ENST00000378574 347 ntBASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 SNORA48.5-201ENST00000391143 135 ntBASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 UBA52P6-201ENST00000399822 382 ntBASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 RSL24D1P4-201ENST00000400938 484 ntBASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 AL109755.1-201ENST00000401791 649 ntBASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 HMGB1P11-201ENST00000413899 637 ntBASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 UBE2FP3-201ENST00000436366 524 ntBASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 Z80107.1-201ENST00000436830 412 ntBASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 AL354941.1-201ENST00000438600 464 ntBASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 Z82210.1-201ENST00000440037 231 ntBASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 PIGFP3-201ENST00000441918 722 ntBASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 MTCO3P45-201ENST00000443036 613 ntBASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 BMI1P1-201ENST00000445879 941 ntBASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 GAPDHP27-201ENST00000447427 1020 ntBASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 NANOGNBP1-201ENST00000448444 480 ntBASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 AP1S2P1-201ENST00000457344 379 ntBASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 AC092798.1-201ENST00000458542 409 ntBASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 MTND4LP3-201ENST00000468320 276 ntBASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 AC103975.1-201ENST00000482506 483 ntBASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 RAC1P5-201ENST00000512182 576 ntBASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 RNA5SP385-201ENST00000515947 110 ntBASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 SNORA31.21-201ENST00000517180 77 ntBASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 RNA5SP291-201ENST00000517222 105 ntBASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 SNORA70.24-201ENST00000517233 118 ntBASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 AP004247.1-201ENST00000531556 1289 ntBASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 AP000857.1-201ENST00000532151 543 ntBASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 TRAV28-201ENST00000557548 323 ntBASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 CYCSP39-201ENST00000565821 309 ntBASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.27□□□□□ -2.05
IGHV3-43DP0DP04 AC068135.2-201ENST00000569293 1028 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms