Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 AC005858.4-201ENST00000623191 700 ntBASIC4.27□□□□□ -1.73
CDKL5O76039 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.27□□□□□ -1.73
CDKL5O76039 ELL2P4-201ENST00000446870 1376 ntBASIC4.27□□□□□ -1.73
CDKL5O76039 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDKL5O76039 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDKL5O76039 OTUD4P1-201ENST00000237841 3067 ntBASIC4.26□□□□□ -1.73
CDKL5O76039 RNU6-223P-201ENST00000362830 107 ntBASIC4.26□□□□□ -1.73
CDKL5O76039 Y_RNA.157-201ENST00000363638 102 ntBASIC4.26□□□□□ -1.73
CDKL5O76039 SSXP10-201ENST00000402595 565 ntBASIC4.26□□□□□ -1.73
CDKL5O76039 AL591416.1-201ENST00000404015 867 ntBASIC4.26□□□□□ -1.73
CDKL5O76039 AL356432.1-201ENST00000405809 419 ntBASIC4.26□□□□□ -1.73
CDKL5O76039 AL354719.1-201ENST00000406535 843 ntBASIC4.26□□□□□ -1.73
CDKL5O76039 RNU2-21P-201ENST00000410368 188 ntBASIC4.26□□□□□ -1.73
CDKL5O76039 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.26□□□□□ -1.73
CDKL5O76039 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.26□□□□□ -1.73
CDKL5O76039 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.26□□□□□ -1.73
CDKL5O76039 OR4F13P-201ENST00000428478 931 ntBASIC4.26□□□□□ -1.73
CDKL5O76039 RPL36AP53-201ENST00000432891 316 ntBASIC4.26□□□□□ -1.73
CDKL5O76039 MRPS18BP2-201ENST00000434310 759 ntBASIC4.26□□□□□ -1.73
CDKL5O76039 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.26□□□□□ -1.73
CDKL5O76039 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.26□□□□□ -1.73
CDKL5O76039 CACYBPP2-201ENST00000453625 678 ntBASIC4.26□□□□□ -1.73
CDKL5O76039 AP001992.1-205ENST00000462248 379 ntBASIC4.26□□□□□ -1.73
CDKL5O76039 AC233702.1-201ENST00000482905 502 ntBASIC4.26□□□□□ -1.73
CDKL5O76039 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.26□□□□□ -1.73
CDKL5O76039 AC093278.1-201ENST00000494700 600 ntBASIC4.26□□□□□ -1.73
CDKL5O76039 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.26□□□□□ -1.73
CDKL5O76039 FGF7P4-201ENST00000509595 295 ntBASIC4.26□□□□□ -1.73
CDKL5O76039 AC026402.1-201ENST00000513642 170 ntBASIC4.26□□□□□ -1.73
CDKL5O76039 SCARNA24.1-201ENST00000516465 137 ntBASIC4.26□□□□□ -1.73
CDKL5O76039 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.26□□□□□ -1.73
CDKL5O76039 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.26□□□□□ -1.73
CDKL5O76039 MIR5047-201ENST00000579212 100 ntBASIC4.26□□□□□ -1.73
CDKL5O76039 MIR3146-201ENST00000580367 79 ntBASIC4.26□□□□□ -1.73
CDKL5O76039 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.26□□□□□ -1.73
CDKL5O76039 AC078795.3-201ENST00000602913 472 ntBASIC4.26□□□□□ -1.73
CDKL5O76039 AL132765.2-201ENST00000610812 351 ntBASIC4.26□□□□□ -1.73
CDKL5O76039 AC126177.8-201ENST00000618339 1015 ntBASIC4.26□□□□□ -1.73
CDKL5O76039 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDKL5O76039 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDKL5O76039 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDKL5O76039 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.25□□□□□ -1.73
CDKL5O76039 SAGE2P-201ENST00000420011 2126 ntBASIC4.25□□□□□ -1.73
CDKL5O76039 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDKL5O76039 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CDKL5O76039 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.25□□□□□ -1.73
CDKL5O76039 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDKL5O76039 RNA5SP515-201ENST00000364570 118 ntBASIC4.25□□□□□ -1.73
CDKL5O76039 Y_RNA.548-201ENST00000384656 105 ntBASIC4.25□□□□□ -1.73
CDKL5O76039 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDKL5O76039 RPL7P60-201ENST00000397636 735 ntBASIC4.25□□□□□ -1.73
CDKL5O76039 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.25□□□□□ -1.73
CDKL5O76039 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.25□□□□□ -1.73
CDKL5O76039 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC4.25□□□□□ -1.73
CDKL5O76039 MTCO3P12-201ENST00000416718 547 ntBASIC4.25□□□□□ -1.73
CDKL5O76039 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.25□□□□□ -1.73
CDKL5O76039 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.25□□□□□ -1.73
CDKL5O76039 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.25□□□□□ -1.73
CDKL5O76039 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDKL5O76039 RPL7P52-201ENST00000449200 742 ntBASIC4.25□□□□□ -1.73
CDKL5O76039 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.25□□□□□ -1.73
CDKL5O76039 RPL23AP62-201ENST00000463396 453 ntBASIC4.25□□□□□ -1.73
CDKL5O76039 MTCO2P29-201ENST00000465212 189 ntBASIC4.25□□□□□ -1.73
CDKL5O76039 FTH1P2-201ENST00000466086 412 ntBASIC4.25□□□□□ -1.73
CDKL5O76039 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.25□□□□□ -1.73
CDKL5O76039 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.25□□□□□ -1.73
CDKL5O76039 AC021146.1-201ENST00000511202 716 ntBASIC4.25□□□□□ -1.73
CDKL5O76039 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.25□□□□□ -1.73
CDKL5O76039 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.25□□□□□ -1.73
CDKL5O76039 HPRT1P3-201ENST00000539521 576 ntBASIC4.25□□□□□ -1.73
CDKL5O76039 AC243972.3-201ENST00000539655 198 ntBASIC4.25□□□□□ -1.73
CDKL5O76039 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.25□□□□□ -1.73
CDKL5O76039 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDKL5O76039 HMGB1P6-201ENST00000569046 646 ntBASIC4.25□□□□□ -1.73
CDKL5O76039 AC060771.1-201ENST00000582031 164 ntBASIC4.25□□□□□ -1.73
CDKL5O76039 MIR4512-201ENST00000583257 77 ntBASIC4.25□□□□□ -1.73
CDKL5O76039 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.25□□□□□ -1.73
CDKL5O76039 AC099669.2-201ENST00000616549 437 ntBASIC4.25□□□□□ -1.73
CDKL5O76039 MIR6864-201ENST00000617935 70 ntBASIC4.25□□□□□ -1.73
CDKL5O76039 AL596245.1-201ENST00000618994 362 ntBASIC4.25□□□□□ -1.73
CDKL5O76039 FRG1KP-201ENST00000623592 341 ntBASIC4.25□□□□□ -1.73
CDKL5O76039 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.25□□□□□ -1.73
CDKL5O76039 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.25□□□□□ -1.73
CDKL5O76039 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
CDKL5O76039 AC100810.6-201ENST00000638068 285 ntBASIC4.25□□□□□ -1.73
CDKL5O76039 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDKL5O76039 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CDKL5O76039 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CDKL5O76039 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDKL5O76039 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDKL5O76039 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDKL5O76039 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.25□□□□□ -1.73
CDKL5O76039 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.24□□□□□ -1.73
CDKL5O76039 AL118496.1-201ENST00000440201 1812 ntBASIC4.24□□□□□ -1.73
CDKL5O76039 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDKL5O76039 RPL7P26-201ENST00000333817 754 ntBASIC4.24□□□□□ -1.73
CDKL5O76039 RNA5SP258-201ENST00000362750 119 ntBASIC4.24□□□□□ -1.73
CDKL5O76039 RNU4-79P-201ENST00000362764 141 ntBASIC4.24□□□□□ -1.73
CDKL5O76039 RNU6-1097P-201ENST00000363586 107 ntBASIC4.24□□□□□ -1.73
CDKL5O76039 RNY1P12-201ENST00000364251 105 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms