Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 FCF1P1-201ENST00000432690 571 ntBASIC2.28□□□□□ -2.04
SHOX2O60902 PGBD4P3-201ENST00000440731 581 ntBASIC2.28□□□□□ -2.04
SHOX2O60902 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.28□□□□□ -2.04
SHOX2O60902 AC009237.8-201ENST00000445492 379 ntBASIC2.28□□□□□ -2.04
SHOX2O60902 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.28□□□□□ -2.04
SHOX2O60902 AP000936.2-201ENST00000447151 681 ntBASIC2.28□□□□□ -2.04
SHOX2O60902 SEPT14P24-201ENST00000447236 180 ntBASIC2.28□□□□□ -2.04
SHOX2O60902 AL021397.1-201ENST00000451806 248 ntBASIC2.28□□□□□ -2.04
SHOX2O60902 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.28□□□□□ -2.04
SHOX2O60902 snoU13.28-201ENST00000459235 104 ntBASIC2.28□□□□□ -2.04
SHOX2O60902 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
SHOX2O60902 MTND4LP3-201ENST00000468320 276 ntBASIC2.28□□□□□ -2.04
SHOX2O60902 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.28□□□□□ -2.04
SHOX2O60902 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.28□□□□□ -2.04
SHOX2O60902 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.28□□□□□ -2.04
SHOX2O60902 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC2.28□□□□□ -2.04
SHOX2O60902 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.28□□□□□ -2.04
SHOX2O60902 AC109464.2-201ENST00000510242 943 ntBASIC2.28□□□□□ -2.04
SHOX2O60902 AC121161.1-201ENST00000510606 652 ntBASIC2.28□□□□□ -2.04
SHOX2O60902 AC008413.1-201ENST00000511864 177 ntBASIC2.28□□□□□ -2.04
SHOX2O60902 AC096725.1-201ENST00000514266 313 ntBASIC2.28□□□□□ -2.04
SHOX2O60902 AC087808.1-201ENST00000520501 361 ntBASIC2.28□□□□□ -2.04
SHOX2O60902 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.28□□□□□ -2.04
SHOX2O60902 AC006518.2-201ENST00000542513 940 ntBASIC2.28□□□□□ -2.04
SHOX2O60902 AC105137.2-201ENST00000569073 466 ntBASIC2.28□□□□□ -2.04
SHOX2O60902 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.28□□□□□ -2.04
SHOX2O60902 APOOP1-201ENST00000604695 592 ntBASIC2.28□□□□□ -2.04
SHOX2O60902 ATP1B3P1-201ENST00000605365 821 ntBASIC2.28□□□□□ -2.04
SHOX2O60902 AC091946.2-201ENST00000606105 291 ntBASIC2.28□□□□□ -2.04
SHOX2O60902 AC090772.4-201ENST00000623599 362 ntBASIC2.28□□□□□ -2.04
SHOX2O60902 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.28□□□□□ -2.04
SHOX2O60902 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.28□□□□□ -2.05
SHOX2O60902 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SHOX2O60902 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SHOX2O60902 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.27□□□□□ -2.05
SHOX2O60902 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
SHOX2O60902 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SHOX2O60902 RNU6-859P-201ENST00000362728 107 ntBASIC2.27□□□□□ -2.05
SHOX2O60902 RNA5SP68-201ENST00000363885 119 ntBASIC2.27□□□□□ -2.05
SHOX2O60902 RNU6-609P-201ENST00000365459 107 ntBASIC2.27□□□□□ -2.05
SHOX2O60902 RNU6-1035P-201ENST00000384477 107 ntBASIC2.27□□□□□ -2.05
SHOX2O60902 MIR764-201ENST00000390811 85 ntBASIC2.27□□□□□ -2.05
SHOX2O60902 AL359511.1-201ENST00000402970 211 ntBASIC2.27□□□□□ -2.05
SHOX2O60902 BX276092.3-201ENST00000424182 230 ntBASIC2.27□□□□□ -2.05
SHOX2O60902 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.27□□□□□ -2.05
SHOX2O60902 RPS15AP28-201ENST00000435088 386 ntBASIC2.27□□□□□ -2.05
SHOX2O60902 TAAR7P-201ENST00000436141 242 ntBASIC2.27□□□□□ -2.05
SHOX2O60902 AC018634.1-201ENST00000437554 401 ntBASIC2.27□□□□□ -2.05
SHOX2O60902 AC104389.3-201ENST00000445629 235 ntBASIC2.27□□□□□ -2.05
SHOX2O60902 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.27□□□□□ -2.05
SHOX2O60902 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.27□□□□□ -2.05
SHOX2O60902 RNU7-23P-201ENST00000459465 62 ntBASIC2.27□□□□□ -2.05
SHOX2O60902 RPL31P41-201ENST00000477967 372 ntBASIC2.27□□□□□ -2.05
SHOX2O60902 AC108734.3-201ENST00000481241 1165 ntBASIC2.27□□□□□ -2.05
SHOX2O60902 RPS15AP34-201ENST00000487776 387 ntBASIC2.27□□□□□ -2.05
SHOX2O60902 CKS1BP2-201ENST00000497342 240 ntBASIC2.27□□□□□ -2.05
SHOX2O60902 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.27□□□□□ -2.05
SHOX2O60902 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.27□□□□□ -2.05
SHOX2O60902 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.27□□□□□ -2.05
SHOX2O60902 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.27□□□□□ -2.05
SHOX2O60902 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.27□□□□□ -2.05
SHOX2O60902 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.27□□□□□ -2.05
SHOX2O60902 AC093510.2-201ENST00000562820 896 ntBASIC2.27□□□□□ -2.05
SHOX2O60902 AC010546.1-201ENST00000569391 485 ntBASIC2.27□□□□□ -2.05
SHOX2O60902 MIR3935-201ENST00000583472 104 ntBASIC2.27□□□□□ -2.05
SHOX2O60902 AP001542.2-201ENST00000593141 364 ntBASIC2.27□□□□□ -2.05
SHOX2O60902 UCA1.1-201ENST00000620952 75 ntBASIC2.27□□□□□ -2.05
SHOX2O60902 uc_338.20-201ENST00000621563 178 ntBASIC2.27□□□□□ -2.05
SHOX2O60902 AC073308.1-201ENST00000623696 305 ntBASIC2.27□□□□□ -2.05
SHOX2O60902 AC079597.1-201ENST00000624306 508 ntBASIC2.27□□□□□ -2.05
SHOX2O60902 MTCO1P4-201ENST00000520516 1409 ntBASIC2.26□□□□□ -2.05
SHOX2O60902 AC022336.2-201ENST00000568966 2538 ntBASIC2.26□□□□□ -2.05
SHOX2O60902 CR848007.1-201ENST00000442354 1699 ntBASIC2.26□□□□□ -2.05
SHOX2O60902 SUGT1P1-201ENST00000379514 476 ntBASIC2.26□□□□□ -2.05
SHOX2O60902 RNU6-657P-201ENST00000383904 107 ntBASIC2.26□□□□□ -2.05
SHOX2O60902 U6.112-201ENST00000384129 70 ntBASIC2.26□□□□□ -2.05
SHOX2O60902 MIR518C-201ENST00000384822 101 ntBASIC2.26□□□□□ -2.05
SHOX2O60902 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
SHOX2O60902 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.26□□□□□ -2.05
SHOX2O60902 AL031679.1-201ENST00000400616 525 ntBASIC2.26□□□□□ -2.05
SHOX2O60902 AL139039.1-201ENST00000401900 692 ntBASIC2.26□□□□□ -2.05
SHOX2O60902 NDUFB4P7-201ENST00000423198 363 ntBASIC2.26□□□□□ -2.05
SHOX2O60902 AC019178.2-201ENST00000423595 505 ntBASIC2.26□□□□□ -2.05
SHOX2O60902 AC019097.1-201ENST00000424783 735 ntBASIC2.26□□□□□ -2.05
SHOX2O60902 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.26□□□□□ -2.05
SHOX2O60902 NDUFA5P4-201ENST00000436704 385 ntBASIC2.26□□□□□ -2.05
SHOX2O60902 AC092393.1-201ENST00000439625 742 ntBASIC2.26□□□□□ -2.05
SHOX2O60902 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.26□□□□□ -2.05
SHOX2O60902 AL591719.1-201ENST00000444669 744 ntBASIC2.26□□□□□ -2.05
SHOX2O60902 VN1R10P-201ENST00000447106 875 ntBASIC2.26□□□□□ -2.05
SHOX2O60902 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.26□□□□□ -2.05
SHOX2O60902 HSPE1P6-201ENST00000479457 291 ntBASIC2.26□□□□□ -2.05
SHOX2O60902 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.26□□□□□ -2.05
SHOX2O60902 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.26□□□□□ -2.05
SHOX2O60902 AC026436.1-201ENST00000510537 270 ntBASIC2.26□□□□□ -2.05
SHOX2O60902 RN7SKP24-201ENST00000515888 284 ntBASIC2.26□□□□□ -2.05
SHOX2O60902 RNA5SP320-201ENST00000516263 124 ntBASIC2.26□□□□□ -2.05
SHOX2O60902 RNU6-1282P-201ENST00000516735 96 ntBASIC2.26□□□□□ -2.05
SHOX2O60902 RNU6-362P-201ENST00000516736 90 ntBASIC2.26□□□□□ -2.05
SHOX2O60902 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms