Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 MIR5694-201ENST00000581190 76 ntBASIC2.6□□□□□ -1.99
BRD4O60885 AC090616.3-201ENST00000582184 217 ntBASIC2.6□□□□□ -1.99
BRD4O60885 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.6□□□□□ -1.99
BRD4O60885 MIR3935-201ENST00000583472 104 ntBASIC2.6□□□□□ -1.99
BRD4O60885 BX322635.1-201ENST00000605804 496 ntBASIC2.6□□□□□ -1.99
BRD4O60885 AC100814.1-201ENST00000606963 623 ntBASIC2.6□□□□□ -1.99
BRD4O60885 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.6□□□□□ -1.99
BRD4O60885 UCA1.1-201ENST00000620952 75 ntBASIC2.6□□□□□ -1.99
BRD4O60885 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.59□□□□□ -1.99
BRD4O60885 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
BRD4O60885 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
BRD4O60885 AC009812.4-201ENST00000569134 1805 ntBASIC2.59□□□□□ -1.99
BRD4O60885 TPTE2P4-201ENST00000258589 1605 ntBASIC2.59□□□□□ -1.99
BRD4O60885 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
BRD4O60885 RNA5SP190-201ENST00000365222 118 ntBASIC2.59□□□□□ -2
BRD4O60885 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.59□□□□□ -2
BRD4O60885 RNA5SP270-201ENST00000411361 118 ntBASIC2.59□□□□□ -2
BRD4O60885 HMGB3P31-201ENST00000413333 595 ntBASIC2.59□□□□□ -2
BRD4O60885 AL358453.1-201ENST00000422522 250 ntBASIC2.59□□□□□ -2
BRD4O60885 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.59□□□□□ -2
BRD4O60885 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC2.59□□□□□ -2
BRD4O60885 AC068135.1-201ENST00000446164 246 ntBASIC2.59□□□□□ -2
BRD4O60885 MTND3P4-201ENST00000453537 303 ntBASIC2.59□□□□□ -2
BRD4O60885 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.59□□□□□ -2
BRD4O60885 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.59□□□□□ -2
BRD4O60885 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.59□□□□□ -2
BRD4O60885 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.59□□□□□ -2
BRD4O60885 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
BRD4O60885 MED28P6-201ENST00000558776 231 ntBASIC2.59□□□□□ -2
BRD4O60885 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC2.59□□□□□ -2
BRD4O60885 MIR3117-201ENST00000584034 78 ntBASIC2.59□□□□□ -2
BRD4O60885 AL670379.6-201ENST00000603753 252 ntBASIC2.59□□□□□ -2
BRD4O60885 AL670379.11-201ENST00000604059 253 ntBASIC2.59□□□□□ -2
BRD4O60885 AL670379.10-201ENST00000604330 253 ntBASIC2.59□□□□□ -2
BRD4O60885 AC008162.1-201ENST00000604718 254 ntBASIC2.59□□□□□ -2
BRD4O60885 AL670379.1-201ENST00000604752 252 ntBASIC2.59□□□□□ -2
BRD4O60885 AL670379.2-201ENST00000604983 252 ntBASIC2.59□□□□□ -2
BRD4O60885 AL670379.5-201ENST00000605253 252 ntBASIC2.59□□□□□ -2
BRD4O60885 AL670379.4-201ENST00000605279 254 ntBASIC2.59□□□□□ -2
BRD4O60885 AL670379.12-201ENST00000605291 253 ntBASIC2.59□□□□□ -2
BRD4O60885 AL670379.8-201ENST00000605353 252 ntBASIC2.59□□□□□ -2
BRD4O60885 AL670379.9-201ENST00000605428 253 ntBASIC2.59□□□□□ -2
BRD4O60885 AL670379.7-201ENST00000605823 252 ntBASIC2.59□□□□□ -2
BRD4O60885 AP002826.1-201ENST00000608835 315 ntBASIC2.59□□□□□ -2
BRD4O60885 AC245884.12-201ENST00000615364 59 ntBASIC2.59□□□□□ -2
BRD4O60885 AC090116.1-201ENST00000615679 446 ntBASIC2.59□□□□□ -2
BRD4O60885 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.59□□□□□ -2
BRD4O60885 AL109659.3-201ENST00000624985 950 ntBASIC2.59□□□□□ -2
BRD4O60885 AL137003.2-201ENST00000606924 2538 ntBASIC2.58□□□□□ -2
BRD4O60885 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.58□□□□□ -2
BRD4O60885 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.58□□□□□ -2
BRD4O60885 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.58□□□□□ -2
BRD4O60885 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
BRD4O60885 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
BRD4O60885 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.58□□□□□ -2
BRD4O60885 RNU6-198P-201ENST00000384258 104 ntBASIC2.58□□□□□ -2
BRD4O60885 U8.10-201ENST00000384260 133 ntBASIC2.58□□□□□ -2
BRD4O60885 RNU6-1072P-201ENST00000384703 107 ntBASIC2.58□□□□□ -2
BRD4O60885 RNU6-443P-201ENST00000384780 107 ntBASIC2.58□□□□□ -2
BRD4O60885 RNU6-272P-201ENST00000411028 104 ntBASIC2.58□□□□□ -2
BRD4O60885 UBE2V1P9-201ENST00000414760 368 ntBASIC2.58□□□□□ -2
BRD4O60885 BTF3P4-201ENST00000418852 495 ntBASIC2.58□□□□□ -2
BRD4O60885 ARL2BPP3-201ENST00000421226 480 ntBASIC2.58□□□□□ -2
BRD4O60885 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.58□□□□□ -2
BRD4O60885 AC092473.1-201ENST00000441098 221 ntBASIC2.58□□□□□ -2
BRD4O60885 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.58□□□□□ -2
BRD4O60885 TAF9P1-201ENST00000445421 515 ntBASIC2.58□□□□□ -2
BRD4O60885 TAF9P2-201ENST00000454958 515 ntBASIC2.58□□□□□ -2
BRD4O60885 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.58□□□□□ -2
BRD4O60885 BX248409.1-201ENST00000455497 255 ntBASIC2.58□□□□□ -2
BRD4O60885 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.58□□□□□ -2
BRD4O60885 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.58□□□□□ -2
BRD4O60885 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.58□□□□□ -2
BRD4O60885 OR1M4P-201ENST00000589199 287 ntBASIC2.58□□□□□ -2
BRD4O60885 AC025588.3-201ENST00000604182 274 ntBASIC2.58□□□□□ -2
BRD4O60885 AC079610.2-201ENST00000604818 690 ntBASIC2.58□□□□□ -2
BRD4O60885 AC004775.1-201ENST00000607389 753 ntBASIC2.58□□□□□ -2
BRD4O60885 AC027309.3-201ENST00000623419 351 ntBASIC2.58□□□□□ -2
BRD4O60885 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.57□□□□□ -2
BRD4O60885 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.57□□□□□ -2
BRD4O60885 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.57□□□□□ -2
BRD4O60885 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.57□□□□□ -2
BRD4O60885 SDAD1P2-201ENST00000441308 2028 ntBASIC2.57□□□□□ -2
BRD4O60885 RNU6-661P-201ENST00000362409 107 ntBASIC2.57□□□□□ -2
BRD4O60885 RNU6-461P-201ENST00000364195 107 ntBASIC2.57□□□□□ -2
BRD4O60885 AL513475.1-201ENST00000406602 315 ntBASIC2.57□□□□□ -2
BRD4O60885 Z86062.1-201ENST00000406773 777 ntBASIC2.57□□□□□ -2
BRD4O60885 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.57□□□□□ -2
BRD4O60885 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC2.57□□□□□ -2
BRD4O60885 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.57□□□□□ -2
BRD4O60885 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.57□□□□□ -2
BRD4O60885 AL365496.1-201ENST00000426885 215 ntBASIC2.57□□□□□ -2
BRD4O60885 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.57□□□□□ -2
BRD4O60885 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.57□□□□□ -2
BRD4O60885 PGBD4P3-201ENST00000440731 581 ntBASIC2.57□□□□□ -2
BRD4O60885 MTND2P19-201ENST00000449129 1012 ntBASIC2.57□□□□□ -2
BRD4O60885 AC090096.1-201ENST00000489168 390 ntBASIC2.57□□□□□ -2
BRD4O60885 OR9N1P-202ENST00000494289 481 ntBASIC2.57□□□□□ -2
BRD4O60885 SSR3-208ENST00000496050 579 ntTSL 4 BASIC2.57□□□□□ -2
BRD4O60885 AC005840.1-201ENST00000498412 377 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms