Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 RNA5SP216-201ENST00000516111 123 ntBASIC3.29□□□□□ -1.88
CACNA1FO60840 OR5AK1P-201ENST00000524837 922 ntBASIC3.29□□□□□ -1.88
CACNA1FO60840 DEFB131D-201ENST00000526803 184 ntBASIC3.29□□□□□ -1.88
CACNA1FO60840 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.29□□□□□ -1.88
CACNA1FO60840 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.29□□□□□ -1.88
CACNA1FO60840 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.29□□□□□ -1.88
CACNA1FO60840 MIR3186-201ENST00000577404 85 ntBASIC3.29□□□□□ -1.88
CACNA1FO60840 MTCYBP22-201ENST00000603788 447 ntBASIC3.29□□□□□ -1.88
CACNA1FO60840 AC024560.3-201ENST00000608482 349 ntBASIC3.29□□□□□ -1.88
CACNA1FO60840 AC095031.1-201ENST00000623685 672 ntBASIC3.29□□□□□ -1.88
CACNA1FO60840 AL008636.1-201ENST00000625038 1018 ntBASIC3.29□□□□□ -1.88
CACNA1FO60840 SEPT14P19-203ENST00000633205 211 ntBASIC3.29□□□□□ -1.88
CACNA1FO60840 MAPK10-322ENST00000641485 4530 ntBASIC3.29□□□□□ -1.88
CACNA1FO60840 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.28□□□□□ -1.88
CACNA1FO60840 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.28□□□□□ -1.88
CACNA1FO60840 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CACNA1FO60840 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.28□□□□□ -1.88
CACNA1FO60840 AL021368.2-201ENST00000606125 5352 ntBASIC3.28□□□□□ -1.88
CACNA1FO60840 RNA5SP289-201ENST00000362332 137 ntBASIC3.28□□□□□ -1.88
CACNA1FO60840 RNU5F-7P-201ENST00000363696 115 ntBASIC3.28□□□□□ -1.88
CACNA1FO60840 RNU6-1151P-201ENST00000384684 107 ntBASIC3.28□□□□□ -1.88
CACNA1FO60840 AL590002.1-201ENST00000406554 418 ntBASIC3.28□□□□□ -1.88
CACNA1FO60840 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.28□□□□□ -1.88
CACNA1FO60840 AC080125.1-201ENST00000414888 684 ntBASIC3.28□□□□□ -1.88
CACNA1FO60840 MTCYBP38-201ENST00000417160 1123 ntBASIC3.28□□□□□ -1.88
CACNA1FO60840 AIMP1P1-201ENST00000418670 937 ntBASIC3.28□□□□□ -1.88
CACNA1FO60840 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.28□□□□□ -1.88
CACNA1FO60840 SLC31A1P1-201ENST00000451221 567 ntBASIC3.28□□□□□ -1.88
CACNA1FO60840 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.28□□□□□ -1.88
CACNA1FO60840 AP000893.1-201ENST00000474462 794 ntBASIC3.28□□□□□ -1.88
CACNA1FO60840 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.28□□□□□ -1.88
CACNA1FO60840 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.28□□□□□ -1.88
CACNA1FO60840 AC104685.1-201ENST00000502445 371 ntBASIC3.28□□□□□ -1.88
CACNA1FO60840 KLRA1P-201ENST00000503499 986 ntBASIC3.28□□□□□ -1.88
CACNA1FO60840 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
CACNA1FO60840 AC025881.1-201ENST00000518851 512 ntBASIC3.28□□□□□ -1.88
CACNA1FO60840 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.28□□□□□ -1.88
CACNA1FO60840 OR6C73P-201ENST00000546432 358 ntBASIC3.28□□□□□ -1.88
CACNA1FO60840 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.28□□□□□ -1.88
CACNA1FO60840 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.28□□□□□ -1.88
CACNA1FO60840 MTND1P15-201ENST00000579262 949 ntBASIC3.28□□□□□ -1.88
CACNA1FO60840 AC092354.1-201ENST00000606057 376 ntBASIC3.28□□□□□ -1.88
CACNA1FO60840 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.28□□□□□ -1.88
CACNA1FO60840 AL359535.1-201ENST00000612100 1087 ntBASIC3.28□□□□□ -1.88
CACNA1FO60840 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CACNA1FO60840 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
CACNA1FO60840 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.28□□□□□ -1.89
CACNA1FO60840 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.27□□□□□ -1.89
CACNA1FO60840 RNY4P24-201ENST00000362735 96 ntBASIC3.27□□□□□ -1.89
CACNA1FO60840 RNU6-839P-201ENST00000363347 108 ntBASIC3.27□□□□□ -1.89
CACNA1FO60840 U3.15-201ENST00000365398 212 ntBASIC3.27□□□□□ -1.89
CACNA1FO60840 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.27□□□□□ -1.89
CACNA1FO60840 HSPE1P26-201ENST00000405341 275 ntBASIC3.27□□□□□ -1.89
CACNA1FO60840 BTF3P7-201ENST00000407097 488 ntBASIC3.27□□□□□ -1.89
CACNA1FO60840 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.27□□□□□ -1.89
CACNA1FO60840 AC083875.1-201ENST00000419509 405 ntBASIC3.27□□□□□ -1.89
CACNA1FO60840 FNDC3CP-201ENST00000420795 1155 ntBASIC3.27□□□□□ -1.89
CACNA1FO60840 MTCO3P1-205ENST00000422088 832 ntBASIC3.27□□□□□ -1.89
CACNA1FO60840 MRPS10P2-201ENST00000431226 381 ntBASIC3.27□□□□□ -1.89
CACNA1FO60840 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
CACNA1FO60840 AC027673.1-201ENST00000456245 405 ntBASIC3.27□□□□□ -1.89
CACNA1FO60840 AC068305.1-201ENST00000497406 726 ntBASIC3.27□□□□□ -1.89
CACNA1FO60840 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CACNA1FO60840 NRON-201ENST00000517270 370 ntBASIC3.27□□□□□ -1.89
CACNA1FO60840 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.27□□□□□ -1.89
CACNA1FO60840 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.27□□□□□ -1.89
CACNA1FO60840 MIR4528-201ENST00000577763 90 ntBASIC3.27□□□□□ -1.89
CACNA1FO60840 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.27□□□□□ -1.89
CACNA1FO60840 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.27□□□□□ -1.89
CACNA1FO60840 AC092650.2-201ENST00000619984 902 ntBASIC3.27□□□□□ -1.89
CACNA1FO60840 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CACNA1FO60840 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CACNA1FO60840 AC066616.2-201ENST00000559334 1481 ntBASIC3.27□□□□□ -1.89
CACNA1FO60840 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CACNA1FO60840 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CACNA1FO60840 RNU4-21P-201ENST00000362802 126 ntBASIC3.27□□□□□ -1.89
CACNA1FO60840 RNU6-582P-201ENST00000362989 107 ntBASIC3.27□□□□□ -1.89
CACNA1FO60840 RNU6-216P-201ENST00000363282 104 ntBASIC3.27□□□□□ -1.89
CACNA1FO60840 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
CACNA1FO60840 RAP1BP3-201ENST00000407180 549 ntBASIC3.27□□□□□ -1.89
CACNA1FO60840 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.27□□□□□ -1.89
CACNA1FO60840 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.27□□□□□ -1.89
CACNA1FO60840 ISCA1P1-201ENST00000426679 387 ntBASIC3.27□□□□□ -1.89
CACNA1FO60840 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.27□□□□□ -1.89
CACNA1FO60840 AC023347.2-201ENST00000433994 462 ntBASIC3.27□□□□□ -1.89
CACNA1FO60840 USP9YP7-201ENST00000436723 430 ntBASIC3.27□□□□□ -1.89
CACNA1FO60840 USP9YP32-201ENST00000452432 430 ntBASIC3.27□□□□□ -1.89
CACNA1FO60840 SUMO2P2-201ENST00000456482 255 ntBASIC3.27□□□□□ -1.89
CACNA1FO60840 RN7SL330P-201ENST00000469709 307 ntBASIC3.27□□□□□ -1.89
CACNA1FO60840 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.27□□□□□ -1.89
CACNA1FO60840 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.27□□□□□ -1.89
CACNA1FO60840 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.27□□□□□ -1.89
CACNA1FO60840 RNU4-60P-201ENST00000517239 135 ntBASIC3.27□□□□□ -1.89
CACNA1FO60840 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CACNA1FO60840 AL133271.1-201ENST00000538229 291 ntBASIC3.27□□□□□ -1.89
CACNA1FO60840 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.27□□□□□ -1.89
CACNA1FO60840 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.27□□□□□ -1.89
CACNA1FO60840 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.27□□□□□ -1.89
CACNA1FO60840 AC068135.2-201ENST00000569293 1028 ntBASIC3.27□□□□□ -1.89
CACNA1FO60840 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms