Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 FCF1P1-201ENST00000432690 571 ntBASIC2.12□□□□□ -2.07
SGCEO43556 CBWD4P-201ENST00000445695 655 ntBASIC2.12□□□□□ -2.07
SGCEO43556 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC2.12□□□□□ -2.07
SGCEO43556 TRGVB-201ENST00000453257 471 ntBASIC2.12□□□□□ -2.07
SGCEO43556 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC2.12□□□□□ -2.07
SGCEO43556 MRPS17P3-201ENST00000465453 385 ntBASIC2.12□□□□□ -2.07
SGCEO43556 AC078857.1-201ENST00000469870 667 ntBASIC2.12□□□□□ -2.07
SGCEO43556 RPS15AP17-201ENST00000470598 390 ntBASIC2.12□□□□□ -2.07
SGCEO43556 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.12□□□□□ -2.07
SGCEO43556 AC017037.2-201ENST00000513850 890 ntBASIC2.12□□□□□ -2.07
SGCEO43556 AC022447.1-201ENST00000515358 464 ntBASIC2.12□□□□□ -2.07
SGCEO43556 AC125611.1-201ENST00000549563 229 ntBASIC2.12□□□□□ -2.07
SGCEO43556 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.12□□□□□ -2.07
SGCEO43556 AL132857.1-201ENST00000555180 708 ntBASIC2.12□□□□□ -2.07
SGCEO43556 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.12□□□□□ -2.07
SGCEO43556 HMGN2P15-201ENST00000585707 270 ntBASIC2.12□□□□□ -2.07
SGCEO43556 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SGCEO43556 AC011451.2-201ENST00000604303 598 ntBASIC2.12□□□□□ -2.07
SGCEO43556 AC245884.12-201ENST00000615364 59 ntBASIC2.12□□□□□ -2.07
SGCEO43556 AC008443.7-201ENST00000622195 246 ntBASIC2.12□□□□□ -2.07
SGCEO43556 AC007998.5-201ENST00000622938 237 ntBASIC2.12□□□□□ -2.07
SGCEO43556 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
SGCEO43556 AC005539.1-201ENST00000443768 1479 ntBASIC2.12□□□□□ -2.07
SGCEO43556 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
SGCEO43556 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SGCEO43556 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.11□□□□□ -2.07
SGCEO43556 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.11□□□□□ -2.07
SGCEO43556 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
SGCEO43556 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
SGCEO43556 RPL21P132-201ENST00000331267 462 ntBASIC2.11□□□□□ -2.07
SGCEO43556 FTLP6-201ENST00000355274 422 ntBASIC2.11□□□□□ -2.07
SGCEO43556 RNU4-72P-201ENST00000410754 173 ntBASIC2.11□□□□□ -2.07
SGCEO43556 RNU6-920P-201ENST00000410926 92 ntBASIC2.11□□□□□ -2.07
SGCEO43556 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.11□□□□□ -2.07
SGCEO43556 LUZP4P1-201ENST00000415420 344 ntBASIC2.11□□□□□ -2.07
SGCEO43556 AC027644.1-201ENST00000419595 298 ntBASIC2.11□□□□□ -2.07
SGCEO43556 AC007560.1-201ENST00000426912 237 ntBASIC2.11□□□□□ -2.07
SGCEO43556 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.11□□□□□ -2.07
SGCEO43556 AC092427.1-201ENST00000439177 601 ntBASIC2.11□□□□□ -2.07
SGCEO43556 AL158053.1-201ENST00000441503 453 ntBASIC2.11□□□□□ -2.07
SGCEO43556 RPS3P1-201ENST00000456781 192 ntBASIC2.11□□□□□ -2.07
SGCEO43556 AP001486.1-201ENST00000463339 476 ntBASIC2.11□□□□□ -2.07
SGCEO43556 OR4G11P-201ENST00000492842 939 ntBASIC2.11□□□□□ -2.07
SGCEO43556 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.11□□□□□ -2.07
SGCEO43556 RNU4-29P-201ENST00000515943 174 ntBASIC2.11□□□□□ -2.07
SGCEO43556 snoZ278.1-201ENST00000517059 112 ntBASIC2.11□□□□□ -2.07
SGCEO43556 AP000889.2-201ENST00000532684 490 ntBASIC2.11□□□□□ -2.07
SGCEO43556 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.11□□□□□ -2.07
SGCEO43556 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.11□□□□□ -2.07
SGCEO43556 AC090615.1-201ENST00000577519 154 ntBASIC2.11□□□□□ -2.07
SGCEO43556 MIR4637-201ENST00000582405 84 ntBASIC2.11□□□□□ -2.07
SGCEO43556 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.11□□□□□ -2.07
SGCEO43556 AC061975.8-201ENST00000587058 721 ntBASIC2.11□□□□□ -2.07
SGCEO43556 AC005332.10-201ENST00000612725 619 ntBASIC2.11□□□□□ -2.07
SGCEO43556 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.11□□□□□ -2.07
SGCEO43556 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.11□□□□□ -2.07
SGCEO43556 MTND4P27-201ENST00000450813 1354 ntBASIC2.1□□□□□ -2.07
SGCEO43556 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
SGCEO43556 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.1□□□□□ -2.07
SGCEO43556 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SGCEO43556 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.1□□□□□ -2.07
SGCEO43556 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SGCEO43556 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.1□□□□□ -2.07
SGCEO43556 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.1□□□□□ -2.07
SGCEO43556 ZNF863P-201ENST00000426746 417 ntBASIC2.1□□□□□ -2.07
SGCEO43556 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.1□□□□□ -2.07
SGCEO43556 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.1□□□□□ -2.07
SGCEO43556 AC108734.3-201ENST00000481241 1165 ntBASIC2.1□□□□□ -2.07
SGCEO43556 RPL36AP51-201ENST00000487216 318 ntBASIC2.1□□□□□ -2.07
SGCEO43556 AC079804.2-201ENST00000490376 200 ntBASIC2.1□□□□□ -2.07
SGCEO43556 AC008427.1-201ENST00000503102 655 ntBASIC2.1□□□□□ -2.07
SGCEO43556 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.1□□□□□ -2.07
SGCEO43556 RNU5F-8P-201ENST00000515941 111 ntBASIC2.1□□□□□ -2.07
SGCEO43556 SCARNA17.1-201ENST00000516211 143 ntBASIC2.1□□□□□ -2.07
SGCEO43556 SCARNA17.2-201ENST00000516334 143 ntBASIC2.1□□□□□ -2.07
SGCEO43556 RNU6-528P-201ENST00000516926 100 ntBASIC2.1□□□□□ -2.07
SGCEO43556 RPL7P20-201ENST00000520308 745 ntBASIC2.1□□□□□ -2.07
SGCEO43556 AC022861.1-201ENST00000522981 663 ntBASIC2.1□□□□□ -2.07
SGCEO43556 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
SGCEO43556 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.1□□□□□ -2.07
SGCEO43556 AC234778.2-201ENST00000566241 354 ntBASIC2.1□□□□□ -2.07
SGCEO43556 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.1□□□□□ -2.07
SGCEO43556 AC009127.3-201ENST00000570531 403 ntBASIC2.1□□□□□ -2.07
SGCEO43556 AC021749.1-201ENST00000604322 607 ntBASIC2.1□□□□□ -2.07
SGCEO43556 AC067747.1-201ENST00000608026 250 ntBASIC2.1□□□□□ -2.07
SGCEO43556 AC020658.4-201ENST00000613987 684 ntBASIC2.1□□□□□ -2.07
SGCEO43556 SCARNA17.4-201ENST00000614296 143 ntBASIC2.1□□□□□ -2.07
SGCEO43556 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.1□□□□□ -2.07
SGCEO43556 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.1□□□□□ -2.07
SGCEO43556 MIR1291-201ENST00000627649 87 ntBASIC2.1□□□□□ -2.07
SGCEO43556 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.1□□□□□ -2.07
SGCEO43556 DDX10P1-201ENST00000448545 1933 ntBASIC2.1□□□□□ -2.07
SGCEO43556 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
SGCEO43556 AL356473.1-201ENST00000406203 1408 ntBASIC2.09□□□□□ -2.07
SGCEO43556 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
SGCEO43556 AC069528.2-201ENST00000624849 1991 ntBASIC2.09□□□□□ -2.07
SGCEO43556 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SGCEO43556 AL589826.1-201ENST00000340697 249 ntBASIC2.09□□□□□ -2.07
SGCEO43556 AL031679.1-201ENST00000400616 525 ntBASIC2.09□□□□□ -2.07
SGCEO43556 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms