Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AC004853.1-201ENST00000604902 698 ntBASIC2.81□□□□□ -1.96
CDX4O14627 AC004832.5-201ENST00000608677 401 ntBASIC2.81□□□□□ -1.96
CDX4O14627 AC073114.1-201ENST00000612027 490 ntBASIC2.81□□□□□ -1.96
CDX4O14627 AC008121.2-201ENST00000614647 523 ntBASIC2.81□□□□□ -1.96
CDX4O14627 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.81□□□□□ -1.96
CDX4O14627 AC092628.2-201ENST00000622492 339 ntBASIC2.81□□□□□ -1.96
CDX4O14627 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CDX4O14627 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CDX4O14627 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CDX4O14627 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
CDX4O14627 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CDX4O14627 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.8□□□□□ -1.96
CDX4O14627 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CDX4O14627 Y_RNA.18-201ENST00000362461 102 ntBASIC2.8□□□□□ -1.96
CDX4O14627 RNA5SP68-201ENST00000363885 119 ntBASIC2.8□□□□□ -1.96
CDX4O14627 RNU6-1074P-201ENST00000383995 104 ntBASIC2.8□□□□□ -1.96
CDX4O14627 MIR504-201ENST00000385065 83 ntBASIC2.8□□□□□ -1.96
CDX4O14627 MIR9-1-201ENST00000385198 89 ntBASIC2.8□□□□□ -1.96
CDX4O14627 MIR591-201ENST00000385290 95 ntBASIC2.8□□□□□ -1.96
CDX4O14627 MIR320C1-201ENST00000408566 88 ntBASIC2.8□□□□□ -1.96
CDX4O14627 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.8□□□□□ -1.96
CDX4O14627 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.8□□□□□ -1.96
CDX4O14627 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.8□□□□□ -1.96
CDX4O14627 MTND1P20-201ENST00000430341 950 ntBASIC2.8□□□□□ -1.96
CDX4O14627 AC010153.1-201ENST00000432862 727 ntBASIC2.8□□□□□ -1.96
CDX4O14627 AC098826.1-201ENST00000433943 471 ntBASIC2.8□□□□□ -1.96
CDX4O14627 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CDX4O14627 MTND5P14-201ENST00000441481 1267 ntBASIC2.8□□□□□ -1.96
CDX4O14627 TAF9P1-201ENST00000445421 515 ntBASIC2.8□□□□□ -1.96
CDX4O14627 AC009961.3-201ENST00000449832 765 ntBASIC2.8□□□□□ -1.96
CDX4O14627 SSXP4-201ENST00000451349 245 ntBASIC2.8□□□□□ -1.96
CDX4O14627 NIPA2P5-201ENST00000452282 464 ntBASIC2.8□□□□□ -1.96
CDX4O14627 TAF9P2-201ENST00000454958 515 ntBASIC2.8□□□□□ -1.96
CDX4O14627 BX322784.1-201ENST00000455793 1077 ntBASIC2.8□□□□□ -1.96
CDX4O14627 RPS3P1-201ENST00000456781 192 ntBASIC2.8□□□□□ -1.96
CDX4O14627 snoU13.4-201ENST00000458916 104 ntBASIC2.8□□□□□ -1.96
CDX4O14627 snoU13.26-201ENST00000459452 105 ntBASIC2.8□□□□□ -1.96
CDX4O14627 AC012181.1-201ENST00000479895 423 ntBASIC2.8□□□□□ -1.96
CDX4O14627 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.8□□□□□ -1.96
CDX4O14627 AP001025.2-201ENST00000490908 477 ntBASIC2.8□□□□□ -1.96
CDX4O14627 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.8□□□□□ -1.96
CDX4O14627 MLLT10P2-201ENST00000506434 249 ntBASIC2.8□□□□□ -1.96
CDX4O14627 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.8□□□□□ -1.96
CDX4O14627 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.8□□□□□ -1.96
CDX4O14627 Y_RNA.655-201ENST00000515919 96 ntBASIC2.8□□□□□ -1.96
CDX4O14627 RNU6-678P-201ENST00000516832 109 ntBASIC2.8□□□□□ -1.96
CDX4O14627 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.8□□□□□ -1.96
CDX4O14627 AC007115.1-201ENST00000546853 234 ntBASIC2.8□□□□□ -1.96
CDX4O14627 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.8□□□□□ -1.96
CDX4O14627 AC103987.3-201ENST00000582071 292 ntBASIC2.8□□□□□ -1.96
CDX4O14627 AL353997.4-201ENST00000586196 166 ntBASIC2.8□□□□□ -1.96
CDX4O14627 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC2.8□□□□□ -1.96
CDX4O14627 AC079089.3-201ENST00000603094 673 ntBASIC2.8□□□□□ -1.96
CDX4O14627 AC006254.3-201ENST00000603353 884 ntBASIC2.8□□□□□ -1.96
CDX4O14627 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.8□□□□□ -1.96
CDX4O14627 AC090186.1-201ENST00000605991 572 ntBASIC2.8□□□□□ -1.96
CDX4O14627 AC064859.1-201ENST00000624741 174 ntBASIC2.8□□□□□ -1.96
CDX4O14627 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.8□□□□□ -1.96
CDX4O14627 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CDX4O14627 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CDX4O14627 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.79□□□□□ -1.96
CDX4O14627 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CDX4O14627 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.79□□□□□ -1.96
CDX4O14627 RNU6-859P-201ENST00000362728 107 ntBASIC2.79□□□□□ -1.96
CDX4O14627 Y_RNA.201-201ENST00000364052 96 ntBASIC2.79□□□□□ -1.96
CDX4O14627 RNU6-173P-201ENST00000364215 104 ntBASIC2.79□□□□□ -1.96
CDX4O14627 RNU1-112P-201ENST00000364401 164 ntBASIC2.79□□□□□ -1.96
CDX4O14627 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
CDX4O14627 MT-TH-201ENST00000387441 69 ntBASIC2.79□□□□□ -1.96
CDX4O14627 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CDX4O14627 RPS3AP26-201ENST00000398259 784 ntBASIC2.79□□□□□ -1.96
CDX4O14627 ZNF885P-201ENST00000420174 1098 ntBASIC2.79□□□□□ -1.96
CDX4O14627 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC2.79□□□□□ -1.96
CDX4O14627 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.79□□□□□ -1.96
CDX4O14627 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.79□□□□□ -1.96
CDX4O14627 AC129850.1-201ENST00000436203 508 ntBASIC2.79□□□□□ -1.96
CDX4O14627 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.79□□□□□ -1.96
CDX4O14627 AL360221.1-201ENST00000445989 335 ntBASIC2.79□□□□□ -1.96
CDX4O14627 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.79□□□□□ -1.96
CDX4O14627 MTCO2P7-201ENST00000446518 666 ntBASIC2.79□□□□□ -1.96
CDX4O14627 AC002381.1-201ENST00000447049 280 ntBASIC2.79□□□□□ -1.96
CDX4O14627 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.79□□□□□ -1.96
CDX4O14627 RPL23AP14-201ENST00000468281 468 ntBASIC2.79□□□□□ -1.96
CDX4O14627 SETP11-201ENST00000473027 690 ntBASIC2.79□□□□□ -1.96
CDX4O14627 AC072039.1-201ENST00000477611 581 ntBASIC2.79□□□□□ -1.96
CDX4O14627 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.79□□□□□ -1.96
CDX4O14627 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.79□□□□□ -1.96
CDX4O14627 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.79□□□□□ -1.96
CDX4O14627 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.79□□□□□ -1.96
CDX4O14627 AC093809.1-201ENST00000509155 340 ntBASIC2.79□□□□□ -1.96
CDX4O14627 PCBP2P3-201ENST00000509726 843 ntBASIC2.79□□□□□ -1.96
CDX4O14627 AC093677.1-201ENST00000514414 678 ntBASIC2.79□□□□□ -1.96
CDX4O14627 SCARNA20.6-201ENST00000517251 106 ntBASIC2.79□□□□□ -1.96
CDX4O14627 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.79□□□□□ -1.96
CDX4O14627 AP002770.2-201ENST00000543613 532 ntBASIC2.79□□□□□ -1.96
CDX4O14627 AC007954.1-201ENST00000554198 494 ntBASIC2.79□□□□□ -1.96
CDX4O14627 ACTR3BP3-201ENST00000565577 979 ntBASIC2.79□□□□□ -1.96
CDX4O14627 ROCK1P1-201ENST00000573767 549 ntBASIC2.79□□□□□ -1.96
CDX4O14627 SNORD53-201ENST00000579969 78 ntBASIC2.79□□□□□ -1.96
CDX4O14627 MIR4425-201ENST00000580572 84 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 141.4 ms