Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 RNU6-920P-201ENST00000410926 92 ntBASIC3.13□□□□□ -1.91
RTCAO00442 AC090960.1-201ENST00000421072 306 ntBASIC3.13□□□□□ -1.91
RTCAO00442 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.13□□□□□ -1.91
RTCAO00442 AC099548.1-201ENST00000421443 426 ntBASIC3.13□□□□□ -1.91
RTCAO00442 RPS27AP14-201ENST00000422868 454 ntBASIC3.13□□□□□ -1.91
RTCAO00442 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.13□□□□□ -1.91
RTCAO00442 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.13□□□□□ -1.91
RTCAO00442 OR4K11P-201ENST00000431829 904 ntBASIC3.13□□□□□ -1.91
RTCAO00442 BNIP3P2-201ENST00000441221 577 ntBASIC3.13□□□□□ -1.91
RTCAO00442 ATP5C1P1-201ENST00000441945 895 ntBASIC3.13□□□□□ -1.91
RTCAO00442 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.13□□□□□ -1.91
RTCAO00442 HMGN1P18-201ENST00000457642 277 ntBASIC3.13□□□□□ -1.91
RTCAO00442 RPS3AP43-201ENST00000479743 781 ntBASIC3.13□□□□□ -1.91
RTCAO00442 AC113155.1-201ENST00000511141 769 ntBASIC3.13□□□□□ -1.91
RTCAO00442 Y_RNA.688-201ENST00000516565 95 ntBASIC3.13□□□□□ -1.91
RTCAO00442 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.13□□□□□ -1.91
RTCAO00442 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.13□□□□□ -1.91
RTCAO00442 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.13□□□□□ -1.91
RTCAO00442 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.13□□□□□ -1.91
RTCAO00442 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RTCAO00442 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RTCAO00442 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.13□□□□□ -1.91
RTCAO00442 AC011611.1-201ENST00000552179 197 ntBASIC3.13□□□□□ -1.91
RTCAO00442 NCAPGP2-201ENST00000557911 754 ntBASIC3.13□□□□□ -1.91
RTCAO00442 AC091489.2-201ENST00000566263 604 ntBASIC3.13□□□□□ -1.91
RTCAO00442 MIR3915-201ENST00000578518 97 ntBASIC3.13□□□□□ -1.91
RTCAO00442 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.13□□□□□ -1.91
RTCAO00442 MIR4444-1-201ENST00000581696 74 ntBASIC3.13□□□□□ -1.91
RTCAO00442 MIR4307-201ENST00000582802 84 ntBASIC3.13□□□□□ -1.91
RTCAO00442 MIR4444-2-201ENST00000584390 74 ntBASIC3.13□□□□□ -1.91
RTCAO00442 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.13□□□□□ -1.91
RTCAO00442 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.13□□□□□ -1.91
RTCAO00442 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.13□□□□□ -1.91
RTCAO00442 AC092354.1-201ENST00000606057 376 ntBASIC3.13□□□□□ -1.91
RTCAO00442 AC107214.2-201ENST00000608204 634 ntBASIC3.13□□□□□ -1.91
RTCAO00442 AC004908.3-201ENST00000610248 625 ntBASIC3.13□□□□□ -1.91
RTCAO00442 AL603758.1-201ENST00000618654 241 ntBASIC3.13□□□□□ -1.91
RTCAO00442 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.13□□□□□ -1.91
RTCAO00442 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.13□□□□□ -1.91
RTCAO00442 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.13□□□□□ -1.91
RTCAO00442 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.13□□□□□ -1.91
RTCAO00442 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RTCAO00442 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
RTCAO00442 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RTCAO00442 AC009902.3-201ENST00000606235 2172 ntBASIC3.12□□□□□ -1.91
RTCAO00442 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.12□□□□□ -1.91
RTCAO00442 U8.9-201ENST00000365667 134 ntBASIC3.12□□□□□ -1.91
RTCAO00442 RNU6-217P-201ENST00000384164 104 ntBASIC3.12□□□□□ -1.91
RTCAO00442 MIR627-201ENST00000384979 97 ntBASIC3.12□□□□□ -1.91
RTCAO00442 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RTCAO00442 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.12□□□□□ -1.91
RTCAO00442 HMGN1P24-201ENST00000412282 298 ntBASIC3.12□□□□□ -1.91
RTCAO00442 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.12□□□□□ -1.91
RTCAO00442 RPL31P12-201ENST00000422587 358 ntBASIC3.12□□□□□ -1.91
RTCAO00442 YME1L1P1-201ENST00000429435 297 ntBASIC3.12□□□□□ -1.91
RTCAO00442 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.12□□□□□ -1.91
RTCAO00442 RPL35AP22-201ENST00000436855 335 ntBASIC3.12□□□□□ -1.91
RTCAO00442 AL049734.2-201ENST00000441066 616 ntBASIC3.12□□□□□ -1.91
RTCAO00442 PRDX3P3-201ENST00000447765 522 ntBASIC3.12□□□□□ -1.91
RTCAO00442 OR6K1P-201ENST00000456766 971 ntBASIC3.12□□□□□ -1.91
RTCAO00442 AP1S2P1-201ENST00000457344 379 ntBASIC3.12□□□□□ -1.91
RTCAO00442 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.12□□□□□ -1.91
RTCAO00442 RPS20P22-201ENST00000473700 357 ntBASIC3.12□□□□□ -1.91
RTCAO00442 AC126182.1-201ENST00000478134 357 ntBASIC3.12□□□□□ -1.91
RTCAO00442 RPS4XP22-201ENST00000480755 780 ntBASIC3.12□□□□□ -1.91
RTCAO00442 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.12□□□□□ -1.91
RTCAO00442 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.12□□□□□ -1.91
RTCAO00442 DUXAP2-201ENST00000519198 589 ntBASIC3.12□□□□□ -1.91
RTCAO00442 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.12□□□□□ -1.91
RTCAO00442 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.12□□□□□ -1.91
RTCAO00442 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.12□□□□□ -1.91
RTCAO00442 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.12□□□□□ -1.91
RTCAO00442 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.12□□□□□ -1.91
RTCAO00442 AC008507.1-201ENST00000587506 734 ntBASIC3.12□□□□□ -1.91
RTCAO00442 Z99497.2-201ENST00000603634 310 ntBASIC3.12□□□□□ -1.91
RTCAO00442 AC103710.4-201ENST00000609301 899 ntBASIC3.12□□□□□ -1.91
RTCAO00442 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.12□□□□□ -1.91
RTCAO00442 AC093838.1-201ENST00000613014 469 ntBASIC3.12□□□□□ -1.91
RTCAO00442 AC012314.7-201ENST00000619693 93 ntBASIC3.12□□□□□ -1.91
RTCAO00442 SNORD39.4-201ENST00000620099 78 ntBASIC3.12□□□□□ -1.91
RTCAO00442 AF246928.1-201ENST00000623768 87 ntBASIC3.12□□□□□ -1.91
RTCAO00442 AC091965.5-201ENST00000624785 342 ntBASIC3.12□□□□□ -1.91
RTCAO00442 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.12□□□□□ -1.91
RTCAO00442 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
RTCAO00442 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
RTCAO00442 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
RTCAO00442 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RTCAO00442 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RTCAO00442 MTND5P33-201ENST00000571250 1450 ntBASIC3.11□□□□□ -1.91
RTCAO00442 CCT4P2-201ENST00000233836 1548 ntBASIC3.11□□□□□ -1.91
RTCAO00442 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.11□□□□□ -1.91
RTCAO00442 RNU6-1180P-201ENST00000364935 107 ntBASIC3.11□□□□□ -1.91
RTCAO00442 U3.20-201ENST00000390909 217 ntBASIC3.11□□□□□ -1.91
RTCAO00442 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.11□□□□□ -1.91
RTCAO00442 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RTCAO00442 AC009518.2-201ENST00000418056 731 ntBASIC3.11□□□□□ -1.91
RTCAO00442 AC098614.2-201ENST00000426040 255 ntBASIC3.11□□□□□ -1.91
RTCAO00442 AC005019.1-201ENST00000436455 431 ntBASIC3.11□□□□□ -1.91
RTCAO00442 LARP1BP3-201ENST00000437229 869 ntBASIC3.11□□□□□ -1.91
RTCAO00442 CST9LP2-201ENST00000437612 320 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms