Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 AL662795.2-201ENST00000624252 3706 ntBASIC5.1□□□□□ -1.59
RNF223E7ERA6 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF223E7ERA6 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC5.1□□□□□ -1.59
RNF223E7ERA6 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.09□□□□□ -1.59
RNF223E7ERA6 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF223E7ERA6 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC5.09□□□□□ -1.59
RNF223E7ERA6 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.09□□□□□ -1.59
RNF223E7ERA6 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
RNF223E7ERA6 AL355834.1-201ENST00000556602 3965 ntBASIC5.09□□□□□ -1.59
RNF223E7ERA6 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RNF223E7ERA6 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF223E7ERA6 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF223E7ERA6 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF223E7ERA6 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RNF223E7ERA6 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF223E7ERA6 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF223E7ERA6 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF223E7ERA6 RNU1-150P-201ENST00000362491 162 ntBASIC5.09□□□□□ -1.59
RNF223E7ERA6 Y_RNA.229-201ENST00000364347 113 ntBASIC5.09□□□□□ -1.59
RNF223E7ERA6 RNA5SP173-201ENST00000364857 136 ntBASIC5.09□□□□□ -1.59
RNF223E7ERA6 RNU6-1131P-201ENST00000364955 107 ntBASIC5.09□□□□□ -1.59
RNF223E7ERA6 RNU6-597P-201ENST00000365620 102 ntBASIC5.09□□□□□ -1.59
RNF223E7ERA6 RNU6-793P-201ENST00000384233 104 ntBASIC5.09□□□□□ -1.59
RNF223E7ERA6 RNU6-106P-201ENST00000384405 107 ntBASIC5.09□□□□□ -1.59
RNF223E7ERA6 SNORD72-201ENST00000390994 80 ntBASIC5.09□□□□□ -1.59
RNF223E7ERA6 U3.37-201ENST00000408528 213 ntBASIC5.09□□□□□ -1.59
RNF223E7ERA6 RNU4-43P-201ENST00000410628 137 ntBASIC5.09□□□□□ -1.59
RNF223E7ERA6 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC5.09□□□□□ -1.59
RNF223E7ERA6 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC5.09□□□□□ -1.59
RNF223E7ERA6 AC098614.2-201ENST00000426040 255 ntBASIC5.09□□□□□ -1.59
RNF223E7ERA6 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC5.09□□□□□ -1.59
RNF223E7ERA6 GPM6BP3-201ENST00000442797 145 ntBASIC5.09□□□□□ -1.59
RNF223E7ERA6 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.09□□□□□ -1.59
RNF223E7ERA6 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.09□□□□□ -1.59
RNF223E7ERA6 AC027667.1-201ENST00000545814 304 ntBASIC5.09□□□□□ -1.59
RNF223E7ERA6 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.09□□□□□ -1.59
RNF223E7ERA6 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.09□□□□□ -1.59
RNF223E7ERA6 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.09□□□□□ -1.59
RNF223E7ERA6 MIR5095-201ENST00000578844 88 ntBASIC5.09□□□□□ -1.59
RNF223E7ERA6 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
RNF223E7ERA6 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.09□□□□□ -1.59
RNF223E7ERA6 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.09□□□□□ -1.59
RNF223E7ERA6 AC079776.5-201ENST00000641920 211 ntBASIC5.09□□□□□ -1.59
RNF223E7ERA6 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
RNF223E7ERA6 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF223E7ERA6 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.09□□□□□ -1.59
RNF223E7ERA6 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.09□□□□□ -1.59
RNF223E7ERA6 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF223E7ERA6 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
RNF223E7ERA6 AL136164.4-201ENST00000625013 2135 ntBASIC5.09□□□□□ -1.59
RNF223E7ERA6 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF223E7ERA6 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF223E7ERA6 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
RNF223E7ERA6 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
RNF223E7ERA6 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
RNF223E7ERA6 AL591848.4-201ENST00000567832 3472 ntBASIC5.09□□□□□ -1.6
RNF223E7ERA6 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RNF223E7ERA6 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RNF223E7ERA6 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.08□□□□□ -1.6
RNF223E7ERA6 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF223E7ERA6 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RNF223E7ERA6 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF223E7ERA6 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RNF223E7ERA6 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF223E7ERA6 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
RNF223E7ERA6 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RNF223E7ERA6 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
RNF223E7ERA6 MIR375-201ENST00000362103 64 ntBASIC5.08□□□□□ -1.6
RNF223E7ERA6 Y_RNA.114-201ENST00000363265 113 ntBASIC5.08□□□□□ -1.6
RNF223E7ERA6 RNA5SP478-201ENST00000364657 115 ntBASIC5.08□□□□□ -1.6
RNF223E7ERA6 SNORA43.1-201ENST00000364863 140 ntBASIC5.08□□□□□ -1.6
RNF223E7ERA6 SNORA20B-201ENST00000384220 132 ntBASIC5.08□□□□□ -1.6
RNF223E7ERA6 MIR548A1-201ENST00000385041 97 ntBASIC5.08□□□□□ -1.6
RNF223E7ERA6 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF223E7ERA6 AL096829.1-201ENST00000413677 457 ntBASIC5.08□□□□□ -1.6
RNF223E7ERA6 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.08□□□□□ -1.6
RNF223E7ERA6 Z85995.1-201ENST00000415547 335 ntBASIC5.08□□□□□ -1.6
RNF223E7ERA6 CYCSP49-201ENST00000420810 319 ntBASIC5.08□□□□□ -1.6
RNF223E7ERA6 AL355433.1-201ENST00000422804 300 ntBASIC5.08□□□□□ -1.6
RNF223E7ERA6 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF223E7ERA6 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.08□□□□□ -1.6
RNF223E7ERA6 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.08□□□□□ -1.6
RNF223E7ERA6 SNORA70.20-201ENST00000516848 126 ntBASIC5.08□□□□□ -1.6
RNF223E7ERA6 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.08□□□□□ -1.6
RNF223E7ERA6 AC010547.6-201ENST00000571789 193 ntBASIC5.08□□□□□ -1.6
RNF223E7ERA6 AC025521.1-201ENST00000621624 286 ntBASIC5.08□□□□□ -1.6
RNF223E7ERA6 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF223E7ERA6 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF223E7ERA6 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RNF223E7ERA6 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.08□□□□□ -1.6
RNF223E7ERA6 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RNF223E7ERA6 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF223E7ERA6 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF223E7ERA6 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
RNF223E7ERA6 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.08□□□□□ -1.6
RNF223E7ERA6 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF223E7ERA6 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF223E7ERA6 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF223E7ERA6 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF223E7ERA6 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms