Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.87□□□□□ -1.47
RCCD1A6NED2 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.87□□□□□ -1.47
RCCD1A6NED2 AC005363.1-201ENST00000530779 351 ntBASIC5.87□□□□□ -1.47
RCCD1A6NED2 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.87□□□□□ -1.47
RCCD1A6NED2 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
RCCD1A6NED2 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC5.87□□□□□ -1.47
RCCD1A6NED2 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RCCD1A6NED2 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC5.87□□□□□ -1.47
RCCD1A6NED2 AC010928.2-201ENST00000588017 287 ntBASIC5.87□□□□□ -1.47
RCCD1A6NED2 AL365222.1-201ENST00000614661 98 ntBASIC5.87□□□□□ -1.47
RCCD1A6NED2 SCARNA4-201ENST00000629045 128 ntBASIC5.87□□□□□ -1.47
RCCD1A6NED2 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RCCD1A6NED2 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RCCD1A6NED2 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC5.87□□□□□ -1.47
RCCD1A6NED2 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.87□□□□□ -1.47
RCCD1A6NED2 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RCCD1A6NED2 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.87□□□□□ -1.47
RCCD1A6NED2 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.86□□□□□ -1.47
RCCD1A6NED2 AC020656.2-201ENST00000613291 5309 ntBASIC5.86□□□□□ -1.47
RCCD1A6NED2 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RCCD1A6NED2 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RCCD1A6NED2 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
RCCD1A6NED2 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
RCCD1A6NED2 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RCCD1A6NED2 RNU6-1130P-201ENST00000365434 107 ntBASIC5.86□□□□□ -1.47
RCCD1A6NED2 SNORA70E-201ENST00000384492 135 ntBASIC5.86□□□□□ -1.47
RCCD1A6NED2 SNORD56.6-201ENST00000384569 71 ntBASIC5.86□□□□□ -1.47
RCCD1A6NED2 MIR1203-201ENST00000408812 85 ntBASIC5.86□□□□□ -1.47
RCCD1A6NED2 MIR1282-201ENST00000408865 101 ntBASIC5.86□□□□□ -1.47
RCCD1A6NED2 SNORD12B-201ENST00000410433 91 ntBASIC5.86□□□□□ -1.47
RCCD1A6NED2 AL390729.2-201ENST00000416137 156 ntBASIC5.86□□□□□ -1.47
RCCD1A6NED2 RPL7AP49-201ENST00000429522 581 ntBASIC5.86□□□□□ -1.47
RCCD1A6NED2 AL591438.1-201ENST00000433508 581 ntBASIC5.86□□□□□ -1.47
RCCD1A6NED2 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.86□□□□□ -1.47
RCCD1A6NED2 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
RCCD1A6NED2 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.86□□□□□ -1.47
RCCD1A6NED2 AC114781.3-201ENST00000512083 142 ntBASIC5.86□□□□□ -1.47
RCCD1A6NED2 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.86□□□□□ -1.47
RCCD1A6NED2 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.86□□□□□ -1.47
RCCD1A6NED2 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.86□□□□□ -1.47
RCCD1A6NED2 RPL23AP88-201ENST00000605759 454 ntBASIC5.86□□□□□ -1.47
RCCD1A6NED2 RMST_6.1-201ENST00000611980 203 ntBASIC5.86□□□□□ -1.47
RCCD1A6NED2 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.86□□□□□ -1.47
RCCD1A6NED2 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.86□□□□□ -1.47
RCCD1A6NED2 AC099506.2-201ENST00000623074 221 ntBASIC5.86□□□□□ -1.47
RCCD1A6NED2 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.86□□□□□ -1.47
RCCD1A6NED2 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
RCCD1A6NED2 BCORP1-203ENST00000513194 5093 ntBASIC5.86□□□□□ -1.47
RCCD1A6NED2 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
RCCD1A6NED2 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RCCD1A6NED2 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RCCD1A6NED2 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.86□□□□□ -1.47
RCCD1A6NED2 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RCCD1A6NED2 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.85□□□□□ -1.47
RCCD1A6NED2 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
RCCD1A6NED2 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
RCCD1A6NED2 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RCCD1A6NED2 Z95114.1-201ENST00000624264 14574 ntBASIC5.85□□□□□ -1.47
RCCD1A6NED2 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.85□□□□□ -1.47
RCCD1A6NED2 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RCCD1A6NED2 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RCCD1A6NED2 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RCCD1A6NED2 Y_RNA.262-201ENST00000364641 102 ntBASIC5.85□□□□□ -1.47
RCCD1A6NED2 RNU6-449P-201ENST00000383914 107 ntBASIC5.85□□□□□ -1.47
RCCD1A6NED2 Y_RNA.400-201ENST00000383963 111 ntBASIC5.85□□□□□ -1.47
RCCD1A6NED2 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.85□□□□□ -1.47
RCCD1A6NED2 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.85□□□□□ -1.47
RCCD1A6NED2 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.85□□□□□ -1.47
RCCD1A6NED2 AC067852.4-201ENST00000590314 478 ntBASIC5.85□□□□□ -1.47
RCCD1A6NED2 AL353748.2-201ENST00000622148 471 ntBASIC5.85□□□□□ -1.47
RCCD1A6NED2 Clostridiales-1.2-201ENST00000636724 160 ntBASIC5.85□□□□□ -1.47
RCCD1A6NED2 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RCCD1A6NED2 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RCCD1A6NED2 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.85□□□□□ -1.47
RCCD1A6NED2 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RCCD1A6NED2 AL353796.1-201ENST00000561542 3241 ntBASIC5.85□□□□□ -1.47
RCCD1A6NED2 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RCCD1A6NED2 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.85□□□□□ -1.47
RCCD1A6NED2 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC5.85□□□□□ -1.47
RCCD1A6NED2 AC116096.1-201ENST00000566804 2314 ntBASIC5.85□□□□□ -1.47
RCCD1A6NED2 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RCCD1A6NED2 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RCCD1A6NED2 SRRM1P3-201ENST00000426911 2678 ntBASIC5.84□□□□□ -1.47
RCCD1A6NED2 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
RCCD1A6NED2 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
RCCD1A6NED2 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.84□□□□□ -1.47
RCCD1A6NED2 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.84□□□□□ -1.47
RCCD1A6NED2 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.84□□□□□ -1.47
RCCD1A6NED2 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.84□□□□□ -1.47
RCCD1A6NED2 Y_RNA.136-201ENST00000363444 102 ntBASIC5.84□□□□□ -1.47
RCCD1A6NED2 U3.7-201ENST00000363668 216 ntBASIC5.84□□□□□ -1.47
RCCD1A6NED2 RNU5E-7P-201ENST00000365290 117 ntBASIC5.84□□□□□ -1.47
RCCD1A6NED2 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
RCCD1A6NED2 RNU5E-9P-201ENST00000411164 104 ntBASIC5.84□□□□□ -1.47
RCCD1A6NED2 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.84□□□□□ -1.47
RCCD1A6NED2 HMGN2P27-201ENST00000427352 270 ntBASIC5.84□□□□□ -1.47
RCCD1A6NED2 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.84□□□□□ -1.47
RCCD1A6NED2 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5.84□□□□□ -1.47
RCCD1A6NED2 AL359073.1-201ENST00000448036 403 ntBASIC5.84□□□□□ -1.47
RCCD1A6NED2 AC068228.1-201ENST00000461723 211 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 149.7 ms