Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 SNORA11-201ENST00000408789 128 ntBASIC1.17□□□□□ -2.22
TRAV1-2A0A0B4J238 HMGB1P49-201ENST00000418882 569 ntBASIC1.17□□□□□ -2.22
TRAV1-2A0A0B4J238 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC1.17□□□□□ -2.22
TRAV1-2A0A0B4J238 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
TRAV1-2A0A0B4J238 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.17□□□□□ -2.22
TRAV1-2A0A0B4J238 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.17□□□□□ -2.22
TRAV1-2A0A0B4J238 OSTCP8-201ENST00000445117 448 ntBASIC1.17□□□□□ -2.22
TRAV1-2A0A0B4J238 TRGVB-201ENST00000453257 471 ntBASIC1.17□□□□□ -2.22
TRAV1-2A0A0B4J238 CDC42P1-201ENST00000456658 548 ntBASIC1.17□□□□□ -2.22
TRAV1-2A0A0B4J238 AC087588.1-201ENST00000462203 316 ntBASIC1.17□□□□□ -2.22
TRAV1-2A0A0B4J238 RPS29P21-201ENST00000496272 170 ntBASIC1.17□□□□□ -2.22
TRAV1-2A0A0B4J238 AC111193.1-201ENST00000504097 155 ntBASIC1.17□□□□□ -2.22
TRAV1-2A0A0B4J238 AC069306.1-201ENST00000507006 843 ntBASIC1.17□□□□□ -2.22
TRAV1-2A0A0B4J238 MRPS17P9-201ENST00000511924 393 ntBASIC1.17□□□□□ -2.22
TRAV1-2A0A0B4J238 MRPS36P2-201ENST00000512569 299 ntBASIC1.17□□□□□ -2.22
TRAV1-2A0A0B4J238 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.17□□□□□ -2.22
TRAV1-2A0A0B4J238 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.17□□□□□ -2.22
TRAV1-2A0A0B4J238 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.17□□□□□ -2.22
TRAV1-2A0A0B4J238 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
TRAV1-2A0A0B4J238 AL355812.1-201ENST00000603215 216 ntBASIC1.17□□□□□ -2.22
TRAV1-2A0A0B4J238 AC126118.1-201ENST00000607744 628 ntBASIC1.17□□□□□ -2.22
TRAV1-2A0A0B4J238 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
TRAV1-2A0A0B4J238 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.17□□□□□ -2.22
TRAV1-2A0A0B4J238 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
TRAV1-2A0A0B4J238 ZNF72P-201ENST00000425869 1908 ntBASIC1.17□□□□□ -2.22
TRAV1-2A0A0B4J238 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
TRAV1-2A0A0B4J238 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
TRAV1-2A0A0B4J238 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
TRAV1-2A0A0B4J238 AC016716.1-201ENST00000265882 708 ntBASIC1.16□□□□□ -2.22
TRAV1-2A0A0B4J238 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.16□□□□□ -2.22
TRAV1-2A0A0B4J238 SNORA38-201ENST00000363946 132 ntBASIC1.16□□□□□ -2.22
TRAV1-2A0A0B4J238 RNU6-60P-201ENST00000364792 103 ntBASIC1.16□□□□□ -2.22
TRAV1-2A0A0B4J238 RNU6-203P-201ENST00000384038 104 ntBASIC1.16□□□□□ -2.22
TRAV1-2A0A0B4J238 AL136372.1-201ENST00000403060 228 ntBASIC1.16□□□□□ -2.22
TRAV1-2A0A0B4J238 CIR1P3-201ENST00000405137 479 ntBASIC1.16□□□□□ -2.22
TRAV1-2A0A0B4J238 USP12PX-201ENST00000432383 1057 ntBASIC1.16□□□□□ -2.22
TRAV1-2A0A0B4J238 HMGN2P3-201ENST00000433603 273 ntBASIC1.16□□□□□ -2.22
TRAV1-2A0A0B4J238 HMGN2P5-201ENST00000436882 273 ntBASIC1.16□□□□□ -2.22
TRAV1-2A0A0B4J238 ARPC3P1-201ENST00000437218 533 ntBASIC1.16□□□□□ -2.22
TRAV1-2A0A0B4J238 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
TRAV1-2A0A0B4J238 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.16□□□□□ -2.22
TRAV1-2A0A0B4J238 RPS15AP27-201ENST00000449183 343 ntBASIC1.16□□□□□ -2.22
TRAV1-2A0A0B4J238 snoU13.28-201ENST00000459235 104 ntBASIC1.16□□□□□ -2.22
TRAV1-2A0A0B4J238 AC140059.1-201ENST00000489238 361 ntBASIC1.16□□□□□ -2.22
TRAV1-2A0A0B4J238 AC010486.1-201ENST00000511793 424 ntBASIC1.16□□□□□ -2.22
TRAV1-2A0A0B4J238 AC104057.1-201ENST00000515547 497 ntBASIC1.16□□□□□ -2.22
TRAV1-2A0A0B4J238 RNU1-103P-201ENST00000516502 125 ntBASIC1.16□□□□□ -2.22
TRAV1-2A0A0B4J238 BTF3P12-201ENST00000519620 469 ntBASIC1.16□□□□□ -2.22
TRAV1-2A0A0B4J238 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.16□□□□□ -2.22
TRAV1-2A0A0B4J238 EIF5A2P1-201ENST00000564027 460 ntBASIC1.16□□□□□ -2.22
TRAV1-2A0A0B4J238 OR10AB1P-201ENST00000609613 938 ntBASIC1.16□□□□□ -2.22
TRAV1-2A0A0B4J238 AP006248.3-201ENST00000623580 594 ntBASIC1.16□□□□□ -2.22
TRAV1-2A0A0B4J238 MTND2P41-201ENST00000637599 773 ntBASIC1.16□□□□□ -2.22
TRAV1-2A0A0B4J238 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
TRAV1-2A0A0B4J238 RNU6-270P-201ENST00000364131 105 ntBASIC1.15□□□□□ -2.23
TRAV1-2A0A0B4J238 RNU6-1226P-201ENST00000384317 107 ntBASIC1.15□□□□□ -2.23
TRAV1-2A0A0B4J238 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.15□□□□□ -2.23
TRAV1-2A0A0B4J238 AL133384.1-201ENST00000412744 351 ntBASIC1.15□□□□□ -2.23
TRAV1-2A0A0B4J238 HMGB3P31-201ENST00000413333 595 ntBASIC1.15□□□□□ -2.23
TRAV1-2A0A0B4J238 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.15□□□□□ -2.23
TRAV1-2A0A0B4J238 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.15□□□□□ -2.23
TRAV1-2A0A0B4J238 MTATP6P7-201ENST00000453315 681 ntBASIC1.15□□□□□ -2.23
TRAV1-2A0A0B4J238 CABYRP1-201ENST00000465493 1045 ntBASIC1.15□□□□□ -2.23
TRAV1-2A0A0B4J238 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.15□□□□□ -2.23
TRAV1-2A0A0B4J238 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC1.15□□□□□ -2.23
TRAV1-2A0A0B4J238 RN7SKP179-201ENST00000516126 217 ntBASIC1.15□□□□□ -2.23
TRAV1-2A0A0B4J238 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.15□□□□□ -2.23
TRAV1-2A0A0B4J238 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC1.15□□□□□ -2.23
TRAV1-2A0A0B4J238 HMGB1P14-201ENST00000557424 591 ntBASIC1.15□□□□□ -2.23
TRAV1-2A0A0B4J238 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.15□□□□□ -2.23
TRAV1-2A0A0B4J238 AC008269.2-201ENST00000561915 1105 ntBASIC1.15□□□□□ -2.23
TRAV1-2A0A0B4J238 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.15□□□□□ -2.23
TRAV1-2A0A0B4J238 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.15□□□□□ -2.23
TRAV1-2A0A0B4J238 AC068620.4-201ENST00000636730 1182 ntBASIC1.15□□□□□ -2.23
TRAV1-2A0A0B4J238 MIR7515-201ENST00000637837 67 ntBASIC1.15□□□□□ -2.23
TRAV1-2A0A0B4J238 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
TRAV1-2A0A0B4J238 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.14□□□□□ -2.23
TRAV1-2A0A0B4J238 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
TRAV1-2A0A0B4J238 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
TRAV1-2A0A0B4J238 MIR1303-201ENST00000408625 86 ntBASIC1.14□□□□□ -2.23
TRAV1-2A0A0B4J238 AC010385.1-201ENST00000412374 256 ntBASIC1.14□□□□□ -2.23
TRAV1-2A0A0B4J238 SEPT2P1-201ENST00000419651 180 ntBASIC1.14□□□□□ -2.23
TRAV1-2A0A0B4J238 PAICSP7-201ENST00000419829 962 ntBASIC1.14□□□□□ -2.23
TRAV1-2A0A0B4J238 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC1.14□□□□□ -2.23
TRAV1-2A0A0B4J238 AC098614.2-201ENST00000426040 255 ntBASIC1.14□□□□□ -2.23
TRAV1-2A0A0B4J238 RPL7L1P10-201ENST00000427790 463 ntBASIC1.14□□□□□ -2.23
TRAV1-2A0A0B4J238 AL035407.1-201ENST00000429211 571 ntBASIC1.14□□□□□ -2.23
TRAV1-2A0A0B4J238 EZH2P1-201ENST00000431167 291 ntBASIC1.14□□□□□ -2.23
TRAV1-2A0A0B4J238 ARL5AP3-201ENST00000439327 386 ntBASIC1.14□□□□□ -2.23
TRAV1-2A0A0B4J238 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC1.14□□□□□ -2.23
TRAV1-2A0A0B4J238 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.14□□□□□ -2.23
TRAV1-2A0A0B4J238 HMGN2P10-201ENST00000448085 265 ntBASIC1.14□□□□□ -2.23
TRAV1-2A0A0B4J238 AC005297.2-201ENST00000450430 606 ntBASIC1.14□□□□□ -2.23
TRAV1-2A0A0B4J238 HSPE1P24-201ENST00000450782 238 ntBASIC1.14□□□□□ -2.23
TRAV1-2A0A0B4J238 AC055731.1-201ENST00000474387 401 ntBASIC1.14□□□□□ -2.23
TRAV1-2A0A0B4J238 TRBV1-201ENST00000476502 284 ntBASIC1.14□□□□□ -2.23
TRAV1-2A0A0B4J238 OR52A4P-202ENST00000481634 799 ntBASIC1.14□□□□□ -2.23
TRAV1-2A0A0B4J238 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC1.14□□□□□ -2.23
TRAV1-2A0A0B4J238 MTCYBP18-201ENST00000501056 747 ntBASIC1.14□□□□□ -2.23
TRAV1-2A0A0B4J238 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms