Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 MRPS36P2-201ENST00000512569 299 ntBASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 AC118465.1-201ENST00000513820 1271 ntBASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 AC022483.1-201ENST00000514020 567 ntBASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 RNU5A-7P-201ENST00000515979 116 ntBASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 AC023632.1-201ENST00000518463 375 ntBASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 GLYCAM1-201ENST00000546596 285 ntBASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 MIR3117-201ENST00000584034 78 ntBASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 AC090330.1-201ENST00000588646 764 ntBASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 AC013553.2-201ENST00000604244 589 ntBASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 AC098657.3-201ENST00000620434 263 ntBASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 AC004009.2-201ENST00000623016 728 ntBASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 AC097714.1-201ENST00000511272 1647 ntBASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 SDAD1P2-201ENST00000441308 2028 ntBASIC2.22□□□□□ -2.05
USH1CQ9Y6N9 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
USH1CQ9Y6N9 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
USH1CQ9Y6N9 HSPE1P11-201ENST00000339579 310 ntBASIC2.22□□□□□ -2.05
USH1CQ9Y6N9 RPS4XP8-201ENST00000402039 771 ntBASIC2.22□□□□□ -2.05
USH1CQ9Y6N9 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC2.22□□□□□ -2.05
USH1CQ9Y6N9 AC099548.1-201ENST00000421443 426 ntBASIC2.22□□□□□ -2.05
USH1CQ9Y6N9 AL358075.3-201ENST00000426289 226 ntBASIC2.22□□□□□ -2.05
USH1CQ9Y6N9 MTND2P5-201ENST00000432656 1006 ntBASIC2.22□□□□□ -2.05
USH1CQ9Y6N9 MTCYBP15-201ENST00000433123 1127 ntBASIC2.22□□□□□ -2.05
USH1CQ9Y6N9 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC2.22□□□□□ -2.05
USH1CQ9Y6N9 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC2.22□□□□□ -2.05
USH1CQ9Y6N9 PGBD4P3-201ENST00000440731 581 ntBASIC2.22□□□□□ -2.05
USH1CQ9Y6N9 SEPT14P24-201ENST00000447236 180 ntBASIC2.22□□□□□ -2.05
USH1CQ9Y6N9 AL500527.1-201ENST00000448532 255 ntBASIC2.22□□□□□ -2.05
USH1CQ9Y6N9 AC005297.2-201ENST00000450430 606 ntBASIC2.22□□□□□ -2.05
USH1CQ9Y6N9 AL109933.2-201ENST00000452651 260 ntBASIC2.22□□□□□ -2.05
USH1CQ9Y6N9 AC109486.1-201ENST00000486833 374 ntBASIC2.22□□□□□ -2.05
USH1CQ9Y6N9 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.22□□□□□ -2.05
USH1CQ9Y6N9 AL049874.1-201ENST00000489560 388 ntBASIC2.22□□□□□ -2.05
USH1CQ9Y6N9 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.22□□□□□ -2.05
USH1CQ9Y6N9 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.22□□□□□ -2.05
USH1CQ9Y6N9 RNU1-40P-201ENST00000516816 164 ntBASIC2.22□□□□□ -2.05
USH1CQ9Y6N9 RNU1-97P-201ENST00000516872 164 ntBASIC2.22□□□□□ -2.05
USH1CQ9Y6N9 AC021269.2-201ENST00000532318 330 ntBASIC2.22□□□□□ -2.05
USH1CQ9Y6N9 AC044913.1-201ENST00000557200 430 ntBASIC2.22□□□□□ -2.05
USH1CQ9Y6N9 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.22□□□□□ -2.05
USH1CQ9Y6N9 AC079395.3-201ENST00000615161 484 ntBASIC2.22□□□□□ -2.05
USH1CQ9Y6N9 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.22□□□□□ -2.05
USH1CQ9Y6N9 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.22□□□□□ -2.05
USH1CQ9Y6N9 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
USH1CQ9Y6N9 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.21□□□□□ -2.05
USH1CQ9Y6N9 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 MIR449A-201ENST00000362113 91 ntBASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 RNA5SP138-201ENST00000365098 114 ntBASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 SUGT1P1-201ENST00000379514 476 ntBASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 RNU6-1072P-201ENST00000384703 107 ntBASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 RNU6-443P-201ENST00000384780 107 ntBASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 U3.20-201ENST00000390909 217 ntBASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 RNA5SP80-201ENST00000410475 111 ntBASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 AL158053.1-201ENST00000441503 453 ntBASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 DDX3P2-201ENST00000446138 111 ntBASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 RNU7-23P-201ENST00000459465 62 ntBASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 RNA5SP364-201ENST00000516938 78 ntBASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 AC025755.1-201ENST00000521306 278 ntBASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 AP003066.2-201ENST00000529375 555 ntBASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 TRAV28-201ENST00000557548 323 ntBASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 MIR5007-201ENST00000583098 95 ntBASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 MIR4658-201ENST00000584344 65 ntBASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 AC005498.1-201ENST00000592125 465 ntBASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 AC098483.2-201ENST00000603158 454 ntBASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 AL035411.2-201ENST00000604022 421 ntBASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 AL450472.3-201ENST00000615578 367 ntBASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.21□□□□□ -2.06
USH1CQ9Y6N9 FTLP6-201ENST00000355274 422 ntBASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 RNU6-76P-201ENST00000384060 104 ntBASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 RNU6-1300P-201ENST00000391046 108 ntBASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 SNRPEP2-201ENST00000397592 279 ntBASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 AL513475.1-201ENST00000406602 315 ntBASIC2.2□□□□□ -2.06
USH1CQ9Y6N9 RNA5SP338-201ENST00000410495 85 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms