Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.61□□□□□ -1.67
CTDP1Q9Y5B0 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.61□□□□□ -1.67
CTDP1Q9Y5B0 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.61□□□□□ -1.67
CTDP1Q9Y5B0 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.61□□□□□ -1.67
CTDP1Q9Y5B0 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.61□□□□□ -1.67
CTDP1Q9Y5B0 AC060771.1-201ENST00000582031 164 ntBASIC4.61□□□□□ -1.67
CTDP1Q9Y5B0 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.61□□□□□ -1.67
CTDP1Q9Y5B0 AC098848.2-201ENST00000588023 330 ntBASIC4.61□□□□□ -1.67
CTDP1Q9Y5B0 AP001429.1-201ENST00000602568 530 ntBASIC4.61□□□□□ -1.67
CTDP1Q9Y5B0 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.61□□□□□ -1.67
CTDP1Q9Y5B0 AL139395.1-201ENST00000603662 160 ntBASIC4.61□□□□□ -1.67
CTDP1Q9Y5B0 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.61□□□□□ -1.67
CTDP1Q9Y5B0 U73479.1-201ENST00000618062 168 ntBASIC4.61□□□□□ -1.67
CTDP1Q9Y5B0 AL356585.4-201ENST00000623078 1229 ntBASIC4.61□□□□□ -1.67
CTDP1Q9Y5B0 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CTDP1Q9Y5B0 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CTDP1Q9Y5B0 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.61□□□□□ -1.67
CTDP1Q9Y5B0 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
CTDP1Q9Y5B0 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CTDP1Q9Y5B0 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 RNA5SP258-201ENST00000362750 119 ntBASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 Y_RNA.166-201ENST00000363730 102 ntBASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 MIR1-2-201ENST00000384961 85 ntBASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 MIR93-201ENST00000385024 80 ntBASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 U3.20-201ENST00000390909 217 ntBASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 AL591416.1-201ENST00000404015 867 ntBASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 AL354719.1-201ENST00000406535 843 ntBASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 RN7SKP156-201ENST00000410308 342 ntBASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 RPL7AP73-201ENST00000413490 353 ntBASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 AL365400.1-201ENST00000431854 640 ntBASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 AC108734.1-201ENST00000439549 399 ntBASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 AL353748.1-201ENST00000440753 474 ntBASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 AP001992.1-205ENST00000462248 379 ntBASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 RN7SL271P-201ENST00000487601 295 ntBASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 AC055855.1-201ENST00000489563 579 ntBASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 HIGD1AP3-201ENST00000515857 278 ntBASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 RNA5SP154-201ENST00000516193 111 ntBASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 RNU6-410P-201ENST00000517006 107 ntBASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 AC078814.3-201ENST00000553036 491 ntBASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 SETP2-201ENST00000553886 926 ntBASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 AL442663.2-201ENST00000554385 511 ntBASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 OR4T1P-201ENST00000554933 911 ntBASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 BNIP3P22-201ENST00000593399 556 ntBASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 AL132765.2-201ENST00000610812 351 ntBASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 AL354950.2-201ENST00000617939 290 ntBASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 AC233309.1-201ENST00000619522 751 ntBASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 AC048347.1-201ENST00000624621 427 ntBASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 GABPAP-201ENST00000419271 1356 ntBASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CTDP1Q9Y5B0 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.59□□□□□ -1.67
CTDP1Q9Y5B0 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
CTDP1Q9Y5B0 RNU4-79P-201ENST00000362764 141 ntBASIC4.59□□□□□ -1.67
CTDP1Q9Y5B0 SNORA63-201ENST00000363450 132 ntBASIC4.59□□□□□ -1.67
CTDP1Q9Y5B0 SNORD82-201ENST00000365530 70 ntBASIC4.59□□□□□ -1.67
CTDP1Q9Y5B0 AL162578.1-201ENST00000406202 378 ntBASIC4.59□□□□□ -1.67
CTDP1Q9Y5B0 MTCO3P12-201ENST00000416718 547 ntBASIC4.59□□□□□ -1.67
CTDP1Q9Y5B0 AC244098.2-201ENST00000422068 99 ntBASIC4.59□□□□□ -1.67
CTDP1Q9Y5B0 RPL35AP12-201ENST00000425362 338 ntBASIC4.59□□□□□ -1.67
CTDP1Q9Y5B0 RPL36AP53-201ENST00000432891 316 ntBASIC4.59□□□□□ -1.67
CTDP1Q9Y5B0 GOT2P5-201ENST00000433995 546 ntBASIC4.59□□□□□ -1.67
CTDP1Q9Y5B0 UBE2V1P13-201ENST00000436983 439 ntBASIC4.59□□□□□ -1.67
CTDP1Q9Y5B0 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CTDP1Q9Y5B0 RPL7P12-201ENST00000446719 750 ntBASIC4.59□□□□□ -1.67
CTDP1Q9Y5B0 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.59□□□□□ -1.67
CTDP1Q9Y5B0 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.59□□□□□ -1.67
CTDP1Q9Y5B0 AC233702.1-201ENST00000482905 502 ntBASIC4.59□□□□□ -1.67
CTDP1Q9Y5B0 USP8P1-201ENST00000494673 3183 ntBASIC4.59□□□□□ -1.67
CTDP1Q9Y5B0 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.59□□□□□ -1.67
CTDP1Q9Y5B0 MTCO3P9-201ENST00000506989 781 ntBASIC4.59□□□□□ -1.67
CTDP1Q9Y5B0 AC016065.2-201ENST00000514530 444 ntBASIC4.59□□□□□ -1.67
CTDP1Q9Y5B0 AC093853.1-201ENST00000515689 483 ntBASIC4.59□□□□□ -1.67
CTDP1Q9Y5B0 SNORD60.2-201ENST00000516883 86 ntBASIC4.59□□□□□ -1.67
CTDP1Q9Y5B0 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.59□□□□□ -1.67
CTDP1Q9Y5B0 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.59□□□□□ -1.67
CTDP1Q9Y5B0 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CTDP1Q9Y5B0 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.59□□□□□ -1.67
CTDP1Q9Y5B0 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CTDP1Q9Y5B0 AC093027.1-201ENST00000546698 429 ntBASIC4.59□□□□□ -1.67
CTDP1Q9Y5B0 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.59□□□□□ -1.67
CTDP1Q9Y5B0 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.59□□□□□ -1.67
CTDP1Q9Y5B0 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.59□□□□□ -1.67
CTDP1Q9Y5B0 AC243960.4-201ENST00000600532 288 ntBASIC4.59□□□□□ -1.67
CTDP1Q9Y5B0 AC064801.1-201ENST00000612025 407 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms