Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
AP4S1Q9Y587 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.34□□□□□ -2.19
AP4S1Q9Y587 Z82190.1-201ENST00000454534 490 ntBASIC1.34□□□□□ -2.19
AP4S1Q9Y587 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.34□□□□□ -2.19
AP4S1Q9Y587 AC021146.2-201ENST00000504736 556 ntBASIC1.34□□□□□ -2.19
AP4S1Q9Y587 AP001960.1-201ENST00000506494 658 ntBASIC1.34□□□□□ -2.19
AP4S1Q9Y587 AC017037.2-201ENST00000513850 890 ntBASIC1.34□□□□□ -2.19
AP4S1Q9Y587 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC1.34□□□□□ -2.19
AP4S1Q9Y587 HMGB1P1-201ENST00000522557 636 ntBASIC1.34□□□□□ -2.19
AP4S1Q9Y587 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC1.34□□□□□ -2.19
AP4S1Q9Y587 AK6P1-201ENST00000540219 478 ntBASIC1.34□□□□□ -2.19
AP4S1Q9Y587 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.34□□□□□ -2.19
AP4S1Q9Y587 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.34□□□□□ -2.19
AP4S1Q9Y587 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.34□□□□□ -2.19
AP4S1Q9Y587 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC1.34□□□□□ -2.19
AP4S1Q9Y587 AC025165.5-201ENST00000602802 578 ntBASIC1.34□□□□□ -2.19
AP4S1Q9Y587 AC106052.1-201ENST00000608029 497 ntBASIC1.34□□□□□ -2.19
AP4S1Q9Y587 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
AP4S1Q9Y587 CR381572.1-201ENST00000625098 102 ntBASIC1.34□□□□□ -2.19
AP4S1Q9Y587 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.34□□□□□ -2.19
AP4S1Q9Y587 NSRP1P1-201ENST00000444067 1693 ntBASIC1.34□□□□□ -2.19
AP4S1Q9Y587 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
AP4S1Q9Y587 WWP1P1-201ENST00000466609 2769 ntBASIC1.34□□□□□ -2.2
AP4S1Q9Y587 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
AP4S1Q9Y587 SNORA23-201ENST00000365128 182 ntBASIC1.33□□□□□ -2.2
AP4S1Q9Y587 RNU6-761P-201ENST00000384148 107 ntBASIC1.33□□□□□ -2.2
AP4S1Q9Y587 RNU6-19P-201ENST00000384718 107 ntBASIC1.33□□□□□ -2.2
AP4S1Q9Y587 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.33□□□□□ -2.2
AP4S1Q9Y587 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.33□□□□□ -2.2
AP4S1Q9Y587 MIR1323-201ENST00000408090 73 ntBASIC1.33□□□□□ -2.2
AP4S1Q9Y587 RNU6-1140P-201ENST00000410517 106 ntBASIC1.33□□□□□ -2.2
AP4S1Q9Y587 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC1.33□□□□□ -2.2
AP4S1Q9Y587 OR4K6P-201ENST00000416478 897 ntBASIC1.33□□□□□ -2.2
AP4S1Q9Y587 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.33□□□□□ -2.2
AP4S1Q9Y587 BTF3P9-201ENST00000418784 283 ntBASIC1.33□□□□□ -2.2
AP4S1Q9Y587 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.33□□□□□ -2.2
AP4S1Q9Y587 AC096920.1-201ENST00000423991 241 ntBASIC1.33□□□□□ -2.2
AP4S1Q9Y587 NDUFA5P10-201ENST00000432147 357 ntBASIC1.33□□□□□ -2.2
AP4S1Q9Y587 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.33□□□□□ -2.2
AP4S1Q9Y587 AP000949.1-201ENST00000438328 629 ntBASIC1.33□□□□□ -2.2
AP4S1Q9Y587 AL353689.1-201ENST00000438895 199 ntBASIC1.33□□□□□ -2.2
AP4S1Q9Y587 HSPE1P24-201ENST00000450782 238 ntBASIC1.33□□□□□ -2.2
AP4S1Q9Y587 OR52A4P-202ENST00000481634 799 ntBASIC1.33□□□□□ -2.2
AP4S1Q9Y587 AC107398.1-201ENST00000486904 505 ntBASIC1.33□□□□□ -2.2
AP4S1Q9Y587 AC008885.2-201ENST00000509506 930 ntBASIC1.33□□□□□ -2.2
AP4S1Q9Y587 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.33□□□□□ -2.2
AP4S1Q9Y587 CYCSP2-201ENST00000558168 301 ntBASIC1.33□□□□□ -2.2
AP4S1Q9Y587 MED28P6-201ENST00000558776 231 ntBASIC1.33□□□□□ -2.2
AP4S1Q9Y587 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.33□□□□□ -2.2
AP4S1Q9Y587 AP006248.3-201ENST00000623580 594 ntBASIC1.33□□□□□ -2.2
AP4S1Q9Y587 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC1.33□□□□□ -2.2
AP4S1Q9Y587 ZNF702P-202ENST00000434269 1966 ntBASIC1.33□□□□□ -2.2
AP4S1Q9Y587 OR4G2P-202ENST00000641004 1759 ntBASIC1.32□□□□□ -2.2
AP4S1Q9Y587 Y_RNA.62-201ENST00000362840 99 ntBASIC1.32□□□□□ -2.2
AP4S1Q9Y587 MIR758-201ENST00000390227 88 ntBASIC1.32□□□□□ -2.2
AP4S1Q9Y587 MTATP6P31-201ENST00000406985 692 ntBASIC1.32□□□□□ -2.2
AP4S1Q9Y587 CYCSP48-201ENST00000417124 323 ntBASIC1.32□□□□□ -2.2
AP4S1Q9Y587 AL353729.1-201ENST00000425044 720 ntBASIC1.32□□□□□ -2.2
AP4S1Q9Y587 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC1.32□□□□□ -2.2
AP4S1Q9Y587 AL714022.1-201ENST00000439897 151 ntBASIC1.32□□□□□ -2.2
AP4S1Q9Y587 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.32□□□□□ -2.2
AP4S1Q9Y587 FGF7P5-201ENST00000441829 291 ntBASIC1.32□□□□□ -2.2
AP4S1Q9Y587 SNRPGP13-201ENST00000442212 177 ntBASIC1.32□□□□□ -2.2
AP4S1Q9Y587 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.32□□□□□ -2.2
AP4S1Q9Y587 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC1.32□□□□□ -2.2
AP4S1Q9Y587 AC116337.2-201ENST00000477662 156 ntBASIC1.32□□□□□ -2.2
AP4S1Q9Y587 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.32□□□□□ -2.2
AP4S1Q9Y587 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.32□□□□□ -2.2
AP4S1Q9Y587 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.32□□□□□ -2.2
AP4S1Q9Y587 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.32□□□□□ -2.2
AP4S1Q9Y587 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.32□□□□□ -2.2
AP4S1Q9Y587 EIF4EP5-201ENST00000528228 640 ntBASIC1.32□□□□□ -2.2
AP4S1Q9Y587 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC1.32□□□□□ -2.2
AP4S1Q9Y587 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.32□□□□□ -2.2
AP4S1Q9Y587 AC091812.1-201ENST00000432235 1948 ntBASIC1.31□□□□□ -2.2
AP4S1Q9Y587 MTND5P28-201ENST00000438005 1594 ntBASIC1.31□□□□□ -2.2
AP4S1Q9Y587 RNU6-989P-201ENST00000362756 107 ntBASIC1.31□□□□□ -2.2
AP4S1Q9Y587 U8.1-201ENST00000362843 134 ntBASIC1.31□□□□□ -2.2
AP4S1Q9Y587 AL627390.1-201ENST00000396055 340 ntBASIC1.31□□□□□ -2.2
AP4S1Q9Y587 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
AP4S1Q9Y587 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.31□□□□□ -2.2
AP4S1Q9Y587 RNU6-1328P-201ENST00000410938 106 ntBASIC1.31□□□□□ -2.2
AP4S1Q9Y587 RNA5SP450-201ENST00000411206 102 ntBASIC1.31□□□□□ -2.2
AP4S1Q9Y587 RN7SKP192-201ENST00000411291 327 ntBASIC1.31□□□□□ -2.2
AP4S1Q9Y587 SDAD1P3-201ENST00000427380 333 ntBASIC1.31□□□□□ -2.2
AP4S1Q9Y587 AL354695.1-201ENST00000427935 228 ntBASIC1.31□□□□□ -2.2
AP4S1Q9Y587 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.31□□□□□ -2.2
AP4S1Q9Y587 MTCYBP12-201ENST00000440559 1134 ntBASIC1.31□□□□□ -2.2
AP4S1Q9Y587 AC118469.1-201ENST00000442943 488 ntBASIC1.31□□□□□ -2.2
AP4S1Q9Y587 RPL7P36-201ENST00000444633 681 ntBASIC1.31□□□□□ -2.2
AP4S1Q9Y587 AL500527.1-201ENST00000448532 255 ntBASIC1.31□□□□□ -2.2
AP4S1Q9Y587 AC005410.1-202ENST00000460347 485 ntBASIC1.31□□□□□ -2.2
AP4S1Q9Y587 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC1.31□□□□□ -2.2
AP4S1Q9Y587 AC093801.2-201ENST00000503966 1050 ntBASIC1.31□□□□□ -2.2
AP4S1Q9Y587 AC008494.2-201ENST00000514544 370 ntBASIC1.31□□□□□ -2.2
AP4S1Q9Y587 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.31□□□□□ -2.2
AP4S1Q9Y587 RNU6-928P-201ENST00000516876 104 ntBASIC1.31□□□□□ -2.2
AP4S1Q9Y587 AC004923.2-201ENST00000529649 369 ntBASIC1.31□□□□□ -2.2
AP4S1Q9Y587 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.31□□□□□ -2.2
AP4S1Q9Y587 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms