Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ZC3H4Q9UPT8 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ZC3H4Q9UPT8 SNORA77-201ENST00000408716 125 ntBASIC6.03□□□□□ -1.44
ZC3H4Q9UPT8 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC6.03□□□□□ -1.44
ZC3H4Q9UPT8 AL160275.3-201ENST00000423876 471 ntBASIC6.03□□□□□ -1.44
ZC3H4Q9UPT8 AC006946.1-201ENST00000429106 328 ntBASIC6.03□□□□□ -1.44
ZC3H4Q9UPT8 AC087385.1-201ENST00000475062 312 ntBASIC6.03□□□□□ -1.44
ZC3H4Q9UPT8 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC6.03□□□□□ -1.44
ZC3H4Q9UPT8 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC6.03□□□□□ -1.44
ZC3H4Q9UPT8 SNORA25.11-201ENST00000515935 105 ntBASIC6.03□□□□□ -1.44
ZC3H4Q9UPT8 RNU6-138P-201ENST00000515952 107 ntBASIC6.03□□□□□ -1.44
ZC3H4Q9UPT8 RN7SKP60-201ENST00000516985 239 ntBASIC6.03□□□□□ -1.44
ZC3H4Q9UPT8 AC069113.1-201ENST00000517763 267 ntBASIC6.03□□□□□ -1.44
ZC3H4Q9UPT8 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC6.03□□□□□ -1.44
ZC3H4Q9UPT8 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC6.03□□□□□ -1.44
ZC3H4Q9UPT8 AL049839.1-201ENST00000556151 657 ntBASIC6.03□□□□□ -1.44
ZC3H4Q9UPT8 AC034105.4-201ENST00000568304 277 ntBASIC6.03□□□□□ -1.44
ZC3H4Q9UPT8 MIR3939-201ENST00000582614 106 ntBASIC6.03□□□□□ -1.44
ZC3H4Q9UPT8 AC067852.4-201ENST00000590314 478 ntBASIC6.03□□□□□ -1.44
ZC3H4Q9UPT8 RNU6-85P-201ENST00000605989 107 ntBASIC6.03□□□□□ -1.44
ZC3H4Q9UPT8 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ZC3H4Q9UPT8 AC239868.2-201ENST00000564237 4527 ntBASIC6.03□□□□□ -1.44
ZC3H4Q9UPT8 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.03□□□□□ -1.44
ZC3H4Q9UPT8 AC027287.1-201ENST00000553115 1453 ntBASIC6.03□□□□□ -1.44
ZC3H4Q9UPT8 AL139811.1-201ENST00000424779 2299 ntBASIC6.03□□□□□ -1.44
ZC3H4Q9UPT8 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC6.03□□□□□ -1.44
ZC3H4Q9UPT8 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
ZC3H4Q9UPT8 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ZC3H4Q9UPT8 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ZC3H4Q9UPT8 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
ZC3H4Q9UPT8 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ZC3H4Q9UPT8 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.03□□□□□ -1.44
ZC3H4Q9UPT8 AC073136.1-201ENST00000449426 2884 ntBASIC6.03□□□□□ -1.44
ZC3H4Q9UPT8 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ZC3H4Q9UPT8 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
ZC3H4Q9UPT8 Y_RNA.19-201ENST00000362462 99 ntBASIC6.02□□□□□ -1.45
ZC3H4Q9UPT8 Y_RNA.276-201ENST00000364732 109 ntBASIC6.02□□□□□ -1.45
ZC3H4Q9UPT8 RNU6-1329P-201ENST00000365664 107 ntBASIC6.02□□□□□ -1.45
ZC3H4Q9UPT8 SNORA70C-201ENST00000384538 135 ntBASIC6.02□□□□□ -1.45
ZC3H4Q9UPT8 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ZC3H4Q9UPT8 PPIAP9-201ENST00000403866 498 ntBASIC6.02□□□□□ -1.45
ZC3H4Q9UPT8 PIGPP3-201ENST00000425307 415 ntBASIC6.02□□□□□ -1.45
ZC3H4Q9UPT8 RNU6ATAC28P-201ENST00000459249 118 ntBASIC6.02□□□□□ -1.45
ZC3H4Q9UPT8 AC011276.1-201ENST00000469688 323 ntBASIC6.02□□□□□ -1.45
ZC3H4Q9UPT8 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.02□□□□□ -1.45
ZC3H4Q9UPT8 AC020593.1-201ENST00000507399 299 ntBASIC6.02□□□□□ -1.45
ZC3H4Q9UPT8 RN7SKP277-201ENST00000516895 283 ntBASIC6.02□□□□□ -1.45
ZC3H4Q9UPT8 RNU6-789P-201ENST00000517105 102 ntBASIC6.02□□□□□ -1.45
ZC3H4Q9UPT8 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC6.02□□□□□ -1.45
ZC3H4Q9UPT8 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC6.02□□□□□ -1.45
ZC3H4Q9UPT8 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC6.02□□□□□ -1.45
ZC3H4Q9UPT8 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC6.02□□□□□ -1.45
ZC3H4Q9UPT8 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ZC3H4Q9UPT8 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
ZC3H4Q9UPT8 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
ZC3H4Q9UPT8 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
ZC3H4Q9UPT8 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ZC3H4Q9UPT8 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ZC3H4Q9UPT8 RNU6-989P-201ENST00000362756 107 ntBASIC6.01□□□□□ -1.45
ZC3H4Q9UPT8 MIR589-201ENST00000385238 99 ntBASIC6.01□□□□□ -1.45
ZC3H4Q9UPT8 SNORD73A-201ENST00000386062 65 ntBASIC6.01□□□□□ -1.45
ZC3H4Q9UPT8 RPL21P91-201ENST00000429231 479 ntBASIC6.01□□□□□ -1.45
ZC3H4Q9UPT8 AL133396.1-201ENST00000432048 687 ntBASIC6.01□□□□□ -1.45
ZC3H4Q9UPT8 RPS3AP46-201ENST00000448352 682 ntBASIC6.01□□□□□ -1.45
ZC3H4Q9UPT8 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC6.01□□□□□ -1.45
ZC3H4Q9UPT8 SNORA84-201ENST00000459229 133 ntBASIC6.01□□□□□ -1.45
ZC3H4Q9UPT8 AC025465.3-201ENST00000510570 311 ntBASIC6.01□□□□□ -1.45
ZC3H4Q9UPT8 RNU6-406P-201ENST00000516470 107 ntBASIC6.01□□□□□ -1.45
ZC3H4Q9UPT8 RNU6-352P-201ENST00000516908 107 ntBASIC6.01□□□□□ -1.45
ZC3H4Q9UPT8 MIR4429-201ENST00000580105 73 ntBASIC6.01□□□□□ -1.45
ZC3H4Q9UPT8 MIR4273-201ENST00000582824 84 ntBASIC6.01□□□□□ -1.45
ZC3H4Q9UPT8 AC067852.3-201ENST00000589177 561 ntBASIC6.01□□□□□ -1.45
ZC3H4Q9UPT8 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC6.01□□□□□ -1.45
ZC3H4Q9UPT8 AC174048.1-201ENST00000603389 144 ntBASIC6.01□□□□□ -1.45
ZC3H4Q9UPT8 AC023043.4-201ENST00000612081 449 ntBASIC6.01□□□□□ -1.45
ZC3H4Q9UPT8 SDR42E1P2-201ENST00000614861 481 ntBASIC6.01□□□□□ -1.45
ZC3H4Q9UPT8 SDR42E1P4-201ENST00000620894 481 ntBASIC6.01□□□□□ -1.45
ZC3H4Q9UPT8 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC6.01□□□□□ -1.45
ZC3H4Q9UPT8 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
ZC3H4Q9UPT8 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ZC3H4Q9UPT8 AC083843.2-201ENST00000568248 6253 ntBASIC6.01□□□□□ -1.45
ZC3H4Q9UPT8 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
ZC3H4Q9UPT8 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC6.01□□□□□ -1.45
ZC3H4Q9UPT8 AP002512.4-202ENST00000641599 4530 ntBASIC6.01□□□□□ -1.45
ZC3H4Q9UPT8 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
ZC3H4Q9UPT8 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
ZC3H4Q9UPT8 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC6.01□□□□□ -1.45
ZC3H4Q9UPT8 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
ZC3H4Q9UPT8 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
ZC3H4Q9UPT8 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6□□□□□ -1.45
ZC3H4Q9UPT8 Y_RNA.480-201ENST00000384364 102 ntBASIC6□□□□□ -1.45
ZC3H4Q9UPT8 Y_RNA.551-201ENST00000384661 102 ntBASIC6□□□□□ -1.45
ZC3H4Q9UPT8 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
ZC3H4Q9UPT8 MIR1250-201ENST00000408098 113 ntBASIC6□□□□□ -1.45
ZC3H4Q9UPT8 RPL7P2-201ENST00000427639 268 ntBASIC6□□□□□ -1.45
ZC3H4Q9UPT8 AC008264.1-201ENST00000447612 367 ntBASIC6□□□□□ -1.45
ZC3H4Q9UPT8 AL590664.1-201ENST00000448065 339 ntBASIC6□□□□□ -1.45
ZC3H4Q9UPT8 snoU109.4-201ENST00000458953 143 ntBASIC6□□□□□ -1.45
ZC3H4Q9UPT8 RPL37P6-201ENST00000460682 294 ntBASIC6□□□□□ -1.45
ZC3H4Q9UPT8 FO393415.2-201ENST00000480085 343 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms