Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.51□□□□□ -1.85
SIX4Q9UIU6 RPL23AP33-201ENST00000442301 452 ntBASIC3.51□□□□□ -1.85
SIX4Q9UIU6 AL590399.6-201ENST00000446396 307 ntBASIC3.51□□□□□ -1.85
SIX4Q9UIU6 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.51□□□□□ -1.85
SIX4Q9UIU6 RPL23AP62-201ENST00000463396 453 ntBASIC3.51□□□□□ -1.85
SIX4Q9UIU6 SNRPGP3-201ENST00000469405 227 ntBASIC3.51□□□□□ -1.85
SIX4Q9UIU6 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SIX4Q9UIU6 RPS3AP17-201ENST00000472594 777 ntBASIC3.51□□□□□ -1.85
SIX4Q9UIU6 AC078785.3-201ENST00000476607 425 ntBASIC3.51□□□□□ -1.85
SIX4Q9UIU6 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.51□□□□□ -1.85
SIX4Q9UIU6 AC022483.1-201ENST00000514020 567 ntBASIC3.51□□□□□ -1.85
SIX4Q9UIU6 Y_RNA.672-201ENST00000516289 104 ntBASIC3.51□□□□□ -1.85
SIX4Q9UIU6 RN7SKP244-201ENST00000516513 307 ntBASIC3.51□□□□□ -1.85
SIX4Q9UIU6 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.51□□□□□ -1.85
SIX4Q9UIU6 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.51□□□□□ -1.85
SIX4Q9UIU6 HIGD1AP1-201ENST00000550979 275 ntBASIC3.51□□□□□ -1.85
SIX4Q9UIU6 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.51□□□□□ -1.85
SIX4Q9UIU6 AC136619.2-201ENST00000563361 631 ntBASIC3.51□□□□□ -1.85
SIX4Q9UIU6 MIR2682-201ENST00000580305 110 ntBASIC3.51□□□□□ -1.85
SIX4Q9UIU6 RMST_8.1-201ENST00000610287 165 ntBASIC3.51□□□□□ -1.85
SIX4Q9UIU6 U6atac.1-201ENST00000616025 117 ntBASIC3.51□□□□□ -1.85
SIX4Q9UIU6 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.51□□□□□ -1.85
SIX4Q9UIU6 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SIX4Q9UIU6 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.51□□□□□ -1.85
SIX4Q9UIU6 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SIX4Q9UIU6 AP001148.1-201ENST00000624124 2359 ntBASIC3.51□□□□□ -1.85
SIX4Q9UIU6 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.5□□□□□ -1.85
SIX4Q9UIU6 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SIX4Q9UIU6 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SIX4Q9UIU6 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SIX4Q9UIU6 HSPE1P26-201ENST00000405341 275 ntBASIC3.5□□□□□ -1.85
SIX4Q9UIU6 MTCYBP24-201ENST00000420387 1106 ntBASIC3.5□□□□□ -1.85
SIX4Q9UIU6 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.5□□□□□ -1.85
SIX4Q9UIU6 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.5□□□□□ -1.85
SIX4Q9UIU6 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.5□□□□□ -1.85
SIX4Q9UIU6 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.5□□□□□ -1.85
SIX4Q9UIU6 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.5□□□□□ -1.85
SIX4Q9UIU6 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.5□□□□□ -1.85
SIX4Q9UIU6 AC108734.1-201ENST00000439549 399 ntBASIC3.5□□□□□ -1.85
SIX4Q9UIU6 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SIX4Q9UIU6 RABEPKP1-201ENST00000440529 1026 ntBASIC3.5□□□□□ -1.85
SIX4Q9UIU6 AL049734.2-201ENST00000441066 616 ntBASIC3.5□□□□□ -1.85
SIX4Q9UIU6 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.5□□□□□ -1.85
SIX4Q9UIU6 AC079448.1-201ENST00000449377 373 ntBASIC3.5□□□□□ -1.85
SIX4Q9UIU6 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.5□□□□□ -1.85
SIX4Q9UIU6 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.5□□□□□ -1.85
SIX4Q9UIU6 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.5□□□□□ -1.85
SIX4Q9UIU6 HMGB1P25-201ENST00000468402 607 ntBASIC3.5□□□□□ -1.85
SIX4Q9UIU6 AC126182.1-201ENST00000478134 357 ntBASIC3.5□□□□□ -1.85
SIX4Q9UIU6 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.5□□□□□ -1.85
SIX4Q9UIU6 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.5□□□□□ -1.85
SIX4Q9UIU6 NIPA2P2-201ENST00000496376 1083 ntBASIC3.5□□□□□ -1.85
SIX4Q9UIU6 AC078918.1-201ENST00000498515 228 ntBASIC3.5□□□□□ -1.85
SIX4Q9UIU6 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.5□□□□□ -1.85
SIX4Q9UIU6 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.5□□□□□ -1.85
SIX4Q9UIU6 PHBP14-201ENST00000512887 367 ntBASIC3.5□□□□□ -1.85
SIX4Q9UIU6 IGKV2-23-201ENST00000518729 323 ntBASIC3.5□□□□□ -1.85
SIX4Q9UIU6 DEFB108A-201ENST00000530110 222 ntBASIC3.5□□□□□ -1.85
SIX4Q9UIU6 AP003385.6-201ENST00000531603 374 ntBASIC3.5□□□□□ -1.85
SIX4Q9UIU6 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.5□□□□□ -1.85
SIX4Q9UIU6 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.5□□□□□ -1.85
SIX4Q9UIU6 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.5□□□□□ -1.85
SIX4Q9UIU6 AL356432.3-201ENST00000568952 465 ntBASIC3.5□□□□□ -1.85
SIX4Q9UIU6 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.5□□□□□ -1.85
SIX4Q9UIU6 MIR3682-201ENST00000581338 84 ntBASIC3.5□□□□□ -1.85
SIX4Q9UIU6 AC060771.1-201ENST00000582031 164 ntBASIC3.5□□□□□ -1.85
SIX4Q9UIU6 AL022154.1-201ENST00000604698 785 ntBASIC3.5□□□□□ -1.85
SIX4Q9UIU6 AC055876.5-201ENST00000605667 259 ntBASIC3.5□□□□□ -1.85
SIX4Q9UIU6 RNU6-87P-201ENST00000607561 108 ntBASIC3.5□□□□□ -1.85
SIX4Q9UIU6 AL590099.1-201ENST00000615276 138 ntBASIC3.5□□□□□ -1.85
SIX4Q9UIU6 AC072046.2-201ENST00000618366 268 ntBASIC3.5□□□□□ -1.85
SIX4Q9UIU6 AC136475.10-201ENST00000620253 385 ntBASIC3.5□□□□□ -1.85
SIX4Q9UIU6 AL157786.1-207ENST00000627771 695 ntBASIC3.5□□□□□ -1.85
SIX4Q9UIU6 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SIX4Q9UIU6 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.5□□□□□ -1.85
SIX4Q9UIU6 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SIX4Q9UIU6 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SIX4Q9UIU6 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.49□□□□□ -1.85
SIX4Q9UIU6 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.49□□□□□ -1.85
SIX4Q9UIU6 FRG1BP-201ENST00000278882 761 ntBASIC3.49□□□□□ -1.85
SIX4Q9UIU6 OR5J1P-201ENST00000313544 939 ntBASIC3.49□□□□□ -1.85
SIX4Q9UIU6 RNU6-359P-201ENST00000365466 108 ntBASIC3.49□□□□□ -1.85
SIX4Q9UIU6 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SIX4Q9UIU6 U3.20-201ENST00000390909 217 ntBASIC3.49□□□□□ -1.85
SIX4Q9UIU6 RNU6-821P-201ENST00000390995 107 ntBASIC3.49□□□□□ -1.85
SIX4Q9UIU6 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SIX4Q9UIU6 MIR1250-201ENST00000408098 113 ntBASIC3.49□□□□□ -1.85
SIX4Q9UIU6 RNU4-78P-201ENST00000410940 126 ntBASIC3.49□□□□□ -1.85
SIX4Q9UIU6 AC092447.6-201ENST00000414578 210 ntBASIC3.49□□□□□ -1.85
SIX4Q9UIU6 AL159169.1-201ENST00000421119 127 ntBASIC3.49□□□□□ -1.85
SIX4Q9UIU6 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.49□□□□□ -1.85
SIX4Q9UIU6 MTCYBP5-201ENST00000423752 1135 ntBASIC3.49□□□□□ -1.85
SIX4Q9UIU6 RPL31P35-201ENST00000431058 377 ntBASIC3.49□□□□□ -1.85
SIX4Q9UIU6 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.49□□□□□ -1.85
SIX4Q9UIU6 AL353705.1-201ENST00000433468 480 ntBASIC3.49□□□□□ -1.85
SIX4Q9UIU6 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.49□□□□□ -1.85
SIX4Q9UIU6 AC112653.1-201ENST00000443851 386 ntBASIC3.49□□□□□ -1.85
SIX4Q9UIU6 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.49□□□□□ -1.85
SIX4Q9UIU6 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.49□□□□□ -1.85
SIX4Q9UIU6 AC010401.1-201ENST00000463867 348 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms