Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AL356981.1-201ENST00000454879 684 ntBASIC5.22□□□□□ -1.57
CNTN3Q9P232 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.22□□□□□ -1.57
CNTN3Q9P232 AL583843.1-201ENST00000456070 346 ntBASIC5.22□□□□□ -1.57
CNTN3Q9P232 RPS23P3-201ENST00000470993 430 ntBASIC5.22□□□□□ -1.57
CNTN3Q9P232 RNU6-388P-201ENST00000517012 105 ntBASIC5.22□□□□□ -1.57
CNTN3Q9P232 RNU6-389P-201ENST00000517048 105 ntBASIC5.22□□□□□ -1.57
CNTN3Q9P232 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.22□□□□□ -1.57
CNTN3Q9P232 ERHP1-201ENST00000523006 310 ntBASIC5.22□□□□□ -1.57
CNTN3Q9P232 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.22□□□□□ -1.57
CNTN3Q9P232 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.22□□□□□ -1.57
CNTN3Q9P232 HSBP1P1-201ENST00000555205 166 ntBASIC5.22□□□□□ -1.57
CNTN3Q9P232 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC5.22□□□□□ -1.57
CNTN3Q9P232 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.22□□□□□ -1.57
CNTN3Q9P232 MIR5699-201ENST00000578903 90 ntBASIC5.22□□□□□ -1.57
CNTN3Q9P232 SNORA74C-1-201ENST00000580726 201 ntBASIC5.22□□□□□ -1.57
CNTN3Q9P232 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC5.22□□□□□ -1.57
CNTN3Q9P232 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.22□□□□□ -1.57
CNTN3Q9P232 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.22□□□□□ -1.57
CNTN3Q9P232 SDR42E1P2-201ENST00000614861 481 ntBASIC5.22□□□□□ -1.57
CNTN3Q9P232 MIR6715B-201ENST00000637172 77 ntBASIC5.22□□□□□ -1.57
CNTN3Q9P232 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CNTN3Q9P232 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CNTN3Q9P232 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.22□□□□□ -1.57
CNTN3Q9P232 AC104260.2-201ENST00000623551 3497 ntBASIC5.22□□□□□ -1.57
CNTN3Q9P232 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.57
CNTN3Q9P232 AC093591.2-201ENST00000565254 3843 ntBASIC5.21□□□□□ -1.57
CNTN3Q9P232 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.21□□□□□ -1.58
CNTN3Q9P232 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.21□□□□□ -1.58
CNTN3Q9P232 RNU6-874P-201ENST00000362390 105 ntBASIC5.21□□□□□ -1.58
CNTN3Q9P232 RNU6-371P-201ENST00000364283 108 ntBASIC5.21□□□□□ -1.58
CNTN3Q9P232 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CNTN3Q9P232 UBBP2-201ENST00000376781 231 ntBASIC5.21□□□□□ -1.58
CNTN3Q9P232 AC097374.1-203ENST00000400783 485 ntBASIC5.21□□□□□ -1.58
CNTN3Q9P232 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC5.21□□□□□ -1.58
CNTN3Q9P232 AL591212.2-201ENST00000433923 257 ntBASIC5.21□□□□□ -1.58
CNTN3Q9P232 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC5.21□□□□□ -1.58
CNTN3Q9P232 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.21□□□□□ -1.58
CNTN3Q9P232 OSTCP8-201ENST00000445117 448 ntBASIC5.21□□□□□ -1.58
CNTN3Q9P232 RPL21P41-201ENST00000459863 264 ntBASIC5.21□□□□□ -1.58
CNTN3Q9P232 ENPP7P9-201ENST00000514456 627 ntBASIC5.21□□□□□ -1.58
CNTN3Q9P232 SNORA31.3-201ENST00000516029 96 ntBASIC5.21□□□□□ -1.58
CNTN3Q9P232 RNU6-120P-201ENST00000516077 103 ntBASIC5.21□□□□□ -1.58
CNTN3Q9P232 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.21□□□□□ -1.58
CNTN3Q9P232 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.21□□□□□ -1.58
CNTN3Q9P232 BNIP3P1-201ENST00000547295 580 ntBASIC5.21□□□□□ -1.58
CNTN3Q9P232 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.21□□□□□ -1.58
CNTN3Q9P232 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.21□□□□□ -1.58
CNTN3Q9P232 SNORD58B-201ENST00000607313 66 ntBASIC5.21□□□□□ -1.58
CNTN3Q9P232 AC015914.2-201ENST00000618167 288 ntBASIC5.21□□□□□ -1.58
CNTN3Q9P232 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.21□□□□□ -1.58
CNTN3Q9P232 MIR7703-201ENST00000620784 77 ntBASIC5.21□□□□□ -1.58
CNTN3Q9P232 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CNTN3Q9P232 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.21□□□□□ -1.58
CNTN3Q9P232 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.21□□□□□ -1.58
CNTN3Q9P232 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CNTN3Q9P232 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
CNTN3Q9P232 TLK1P1-201ENST00000456760 2440 ntBASIC5.21□□□□□ -1.58
CNTN3Q9P232 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CNTN3Q9P232 AL356489.2-201ENST00000566968 3528 ntBASIC5.2□□□□□ -1.58
CNTN3Q9P232 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CNTN3Q9P232 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.2□□□□□ -1.58
CNTN3Q9P232 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CNTN3Q9P232 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CNTN3Q9P232 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CNTN3Q9P232 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CNTN3Q9P232 AC079741.1-201ENST00000321498 212 ntBASIC5.2□□□□□ -1.58
CNTN3Q9P232 RNU6-450P-201ENST00000364654 107 ntBASIC5.2□□□□□ -1.58
CNTN3Q9P232 RNU6-596P-201ENST00000365395 98 ntBASIC5.2□□□□□ -1.58
CNTN3Q9P232 RNU6-1329P-201ENST00000365664 107 ntBASIC5.2□□□□□ -1.58
CNTN3Q9P232 RNU6-842P-201ENST00000384269 107 ntBASIC5.2□□□□□ -1.58
CNTN3Q9P232 RNU4-70P-201ENST00000384579 139 ntBASIC5.2□□□□□ -1.58
CNTN3Q9P232 MIR192-201ENST00000384915 110 ntBASIC5.2□□□□□ -1.58
CNTN3Q9P232 MIR517A-201ENST00000385001 87 ntBASIC5.2□□□□□ -1.58
CNTN3Q9P232 AL603908.1-201ENST00000406098 201 ntBASIC5.2□□□□□ -1.58
CNTN3Q9P232 MIR1252-201ENST00000408861 65 ntBASIC5.2□□□□□ -1.58
CNTN3Q9P232 RNU2-43P-201ENST00000410306 190 ntBASIC5.2□□□□□ -1.58
CNTN3Q9P232 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.2□□□□□ -1.58
CNTN3Q9P232 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC5.2□□□□□ -1.58
CNTN3Q9P232 RPS17P8-201ENST00000434525 335 ntBASIC5.2□□□□□ -1.58
CNTN3Q9P232 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.2□□□□□ -1.58
CNTN3Q9P232 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.2□□□□□ -1.58
CNTN3Q9P232 AC073264.2-201ENST00000448886 166 ntBASIC5.2□□□□□ -1.58
CNTN3Q9P232 AL353752.1-201ENST00000454946 260 ntBASIC5.2□□□□□ -1.58
CNTN3Q9P232 AC011005.2-201ENST00000487324 359 ntBASIC5.2□□□□□ -1.58
CNTN3Q9P232 RPS27AP13-201ENST00000498403 237 ntBASIC5.2□□□□□ -1.58
CNTN3Q9P232 RNU6-408P-201ENST00000515910 100 ntBASIC5.2□□□□□ -1.58
CNTN3Q9P232 RNU6-709P-201ENST00000517257 104 ntBASIC5.2□□□□□ -1.58
CNTN3Q9P232 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.2□□□□□ -1.58
CNTN3Q9P232 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.2□□□□□ -1.58
CNTN3Q9P232 AC133555.2-201ENST00000550213 292 ntBASIC5.2□□□□□ -1.58
CNTN3Q9P232 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC5.2□□□□□ -1.58
CNTN3Q9P232 RN7SL690P-201ENST00000582087 240 ntBASIC5.2□□□□□ -1.58
CNTN3Q9P232 AC002044.1-201ENST00000606707 158 ntBASIC5.2□□□□□ -1.58
CNTN3Q9P232 MIR6853-201ENST00000619642 74 ntBASIC5.2□□□□□ -1.58
CNTN3Q9P232 MIR8062-201ENST00000621515 85 ntBASIC5.2□□□□□ -1.58
CNTN3Q9P232 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.2□□□□□ -1.58
CNTN3Q9P232 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CNTN3Q9P232 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CNTN3Q9P232 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.2□□□□□ -1.58
CNTN3Q9P232 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms