Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 SDR42E1P2-201ENST00000614861 481 ntBASIC4.21□□□□□ -1.74
KCMF1Q9P0J7 AC084781.2-201ENST00000615568 161 ntBASIC4.21□□□□□ -1.74
KCMF1Q9P0J7 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.21□□□□□ -1.74
KCMF1Q9P0J7 AC007546.1-201ENST00000619452 559 ntBASIC4.21□□□□□ -1.74
KCMF1Q9P0J7 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
KCMF1Q9P0J7 AC018529.3-201ENST00000624212 2254 ntBASIC4.21□□□□□ -1.74
KCMF1Q9P0J7 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
KCMF1Q9P0J7 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
KCMF1Q9P0J7 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
KCMF1Q9P0J7 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 RNU6-43P-201ENST00000384302 107 ntBASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 MIR3065-201ENST00000390137 79 ntBASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 SNORD70.1-201ENST00000391007 85 ntBASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 CISD1P1-201ENST00000393907 327 ntBASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 MIR548K-201ENST00000408406 116 ntBASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 RNU6-1304P-201ENST00000411374 106 ntBASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 VN1R36P-201ENST00000414936 291 ntBASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 BX682237.1-201ENST00000415016 335 ntBASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 TMSB10P2-201ENST00000416049 131 ntBASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 AL356387.2-201ENST00000422272 243 ntBASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 RPL18P10-201ENST00000425606 538 ntBASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 AC104058.1-201ENST00000448028 297 ntBASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 AL359073.1-201ENST00000448036 403 ntBASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 RPL21P126-201ENST00000470049 478 ntBASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 TRBV1-201ENST00000476502 284 ntBASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 AC012181.1-201ENST00000479895 423 ntBASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 AP001086.1-201ENST00000494882 321 ntBASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 KLHL2P1-201ENST00000508691 521 ntBASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 HIGD1AP13-201ENST00000509878 289 ntBASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 TBCAP3-201ENST00000512475 312 ntBASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 RNU6-256P-201ENST00000516747 97 ntBASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 AC018630.1-201ENST00000541376 925 ntBASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 MIR4790-201ENST00000577799 79 ntBASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 MIR3672-201ENST00000584290 82 ntBASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 AC067852.3-201ENST00000589177 561 ntBASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 ATP1B3P1-201ENST00000605365 821 ntBASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 AL627309.6-201ENST00000606857 840 ntBASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 AC009570.1-201ENST00000609599 745 ntBASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 MIR6758-201ENST00000620653 63 ntBASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 MIR6810-201ENST00000622701 70 ntBASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 AC067931.1-201ENST00000624190 671 ntBASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
KCMF1Q9P0J7 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 AC126755.2-208ENST00000327792 462 ntBASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 AC138969.1-213ENST00000331436 462 ntBASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 RNA5SP307-201ENST00000362863 116 ntBASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 RNU6-1074P-201ENST00000383995 104 ntBASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 AL139039.1-201ENST00000401900 692 ntBASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 SNORA74C-2-201ENST00000411179 201 ntBASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 AC074085.1-201ENST00000413598 418 ntBASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 BTF3L4P3-201ENST00000418879 476 ntBASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 DHFRP3-201ENST00000455595 559 ntBASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 AC096576.1-201ENST00000489014 359 ntBASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 RPS27AP13-201ENST00000498403 237 ntBASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms