Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.86□□□□□ -1.79
SMC4Q9NTJ3 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SMC4Q9NTJ3 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.86□□□□□ -1.79
SMC4Q9NTJ3 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
SMC4Q9NTJ3 SNORA1.3-201ENST00000384676 136 ntBASIC3.86□□□□□ -1.79
SMC4Q9NTJ3 RPL21P3-201ENST00000395517 478 ntBASIC3.86□□□□□ -1.79
SMC4Q9NTJ3 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.86□□□□□ -1.79
SMC4Q9NTJ3 RNA5SP274-201ENST00000410484 108 ntBASIC3.86□□□□□ -1.79
SMC4Q9NTJ3 RPL7P8-201ENST00000411964 730 ntBASIC3.86□□□□□ -1.79
SMC4Q9NTJ3 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.86□□□□□ -1.79
SMC4Q9NTJ3 AL445567.1-201ENST00000439121 144 ntBASIC3.86□□□□□ -1.79
SMC4Q9NTJ3 RPL17P49-201ENST00000443728 411 ntBASIC3.86□□□□□ -1.79
SMC4Q9NTJ3 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.86□□□□□ -1.79
SMC4Q9NTJ3 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.86□□□□□ -1.79
SMC4Q9NTJ3 AC146507.2-201ENST00000460608 476 ntBASIC3.86□□□□□ -1.79
SMC4Q9NTJ3 AC072039.1-201ENST00000477611 581 ntBASIC3.86□□□□□ -1.79
SMC4Q9NTJ3 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.86□□□□□ -1.79
SMC4Q9NTJ3 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.86□□□□□ -1.79
SMC4Q9NTJ3 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.86□□□□□ -1.79
SMC4Q9NTJ3 RN7SKP272-201ENST00000516988 232 ntBASIC3.86□□□□□ -1.79
SMC4Q9NTJ3 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.86□□□□□ -1.79
SMC4Q9NTJ3 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.86□□□□□ -1.79
SMC4Q9NTJ3 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.86□□□□□ -1.79
SMC4Q9NTJ3 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.86□□□□□ -1.79
SMC4Q9NTJ3 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.86□□□□□ -1.79
SMC4Q9NTJ3 AC135628.1-201ENST00000568867 534 ntBASIC3.86□□□□□ -1.79
SMC4Q9NTJ3 AC060771.1-201ENST00000582031 164 ntBASIC3.86□□□□□ -1.79
SMC4Q9NTJ3 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.86□□□□□ -1.79
SMC4Q9NTJ3 AC093838.1-201ENST00000613014 469 ntBASIC3.86□□□□□ -1.79
SMC4Q9NTJ3 AC091965.5-201ENST00000624785 342 ntBASIC3.86□□□□□ -1.79
SMC4Q9NTJ3 AC019226.1-201ENST00000625666 515 ntBASIC3.86□□□□□ -1.79
SMC4Q9NTJ3 AC092192.1-201ENST00000633154 1018 ntBASIC3.86□□□□□ -1.79
SMC4Q9NTJ3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.86□□□□□ -1.79
SMC4Q9NTJ3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
SMC4Q9NTJ3 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SMC4Q9NTJ3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.85□□□□□ -1.79
SMC4Q9NTJ3 FAT1P1-201ENST00000406588 507 ntBASIC3.85□□□□□ -1.79
SMC4Q9NTJ3 RNU4-72P-201ENST00000410754 173 ntBASIC3.85□□□□□ -1.79
SMC4Q9NTJ3 AC234781.2-201ENST00000426370 994 ntBASIC3.85□□□□□ -1.79
SMC4Q9NTJ3 AL356867.1-201ENST00000429623 299 ntBASIC3.85□□□□□ -1.79
SMC4Q9NTJ3 RPS6P15-201ENST00000431996 751 ntBASIC3.85□□□□□ -1.79
SMC4Q9NTJ3 AL671855.1-201ENST00000446875 1203 ntBASIC3.85□□□□□ -1.79
SMC4Q9NTJ3 RNA5SP310-201ENST00000459084 116 ntBASIC3.85□□□□□ -1.79
SMC4Q9NTJ3 AL049714.1-201ENST00000466686 347 ntBASIC3.85□□□□□ -1.79
SMC4Q9NTJ3 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SMC4Q9NTJ3 AC009812.2-201ENST00000517657 457 ntBASIC3.85□□□□□ -1.79
SMC4Q9NTJ3 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.85□□□□□ -1.79
SMC4Q9NTJ3 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SMC4Q9NTJ3 AC004223.4-201ENST00000612426 332 ntBASIC3.85□□□□□ -1.79
SMC4Q9NTJ3 AC013476.2-201ENST00000614456 459 ntBASIC3.85□□□□□ -1.79
SMC4Q9NTJ3 MIR6076-201ENST00000617521 113 ntBASIC3.85□□□□□ -1.79
SMC4Q9NTJ3 AL603758.1-201ENST00000618654 241 ntBASIC3.85□□□□□ -1.79
SMC4Q9NTJ3 Z99129.2-201ENST00000619967 314 ntBASIC3.85□□□□□ -1.79
SMC4Q9NTJ3 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.85□□□□□ -1.79
SMC4Q9NTJ3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.85□□□□□ -1.79
SMC4Q9NTJ3 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.85□□□□□ -1.79
SMC4Q9NTJ3 FAM35CP-201ENST00000554755 2470 ntBASIC3.84□□□□□ -1.79
SMC4Q9NTJ3 RNU6-660P-201ENST00000364566 109 ntBASIC3.84□□□□□ -1.79
SMC4Q9NTJ3 RNU6-1077P-201ENST00000410506 102 ntBASIC3.84□□□□□ -1.79
SMC4Q9NTJ3 MTND4P20-201ENST00000424125 869 ntBASIC3.84□□□□□ -1.79
SMC4Q9NTJ3 USP9YP36-201ENST00000424581 829 ntBASIC3.84□□□□□ -1.79
SMC4Q9NTJ3 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.84□□□□□ -1.79
SMC4Q9NTJ3 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.84□□□□□ -1.79
SMC4Q9NTJ3 LARP1BP3-201ENST00000437229 869 ntBASIC3.84□□□□□ -1.79
SMC4Q9NTJ3 MTCYBP39-201ENST00000437562 491 ntBASIC3.84□□□□□ -1.79
SMC4Q9NTJ3 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.84□□□□□ -1.79
SMC4Q9NTJ3 AL831737.1-201ENST00000441288 271 ntBASIC3.84□□□□□ -1.79
SMC4Q9NTJ3 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.84□□□□□ -1.79
SMC4Q9NTJ3 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.84□□□□□ -1.79
SMC4Q9NTJ3 RN7SL633P-201ENST00000488974 297 ntBASIC3.84□□□□□ -1.79
SMC4Q9NTJ3 OR2A20P-203ENST00000498397 1268 ntBASIC3.84□□□□□ -1.79
SMC4Q9NTJ3 SCARNA15.2-201ENST00000516409 127 ntBASIC3.84□□□□□ -1.79
SMC4Q9NTJ3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.84□□□□□ -1.79
SMC4Q9NTJ3 PSMA2P1-201ENST00000526365 646 ntBASIC3.84□□□□□ -1.79
SMC4Q9NTJ3 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.84□□□□□ -1.79
SMC4Q9NTJ3 MRPS36P5-201ENST00000551909 298 ntBASIC3.84□□□□□ -1.79
SMC4Q9NTJ3 AC007954.1-201ENST00000554198 494 ntBASIC3.84□□□□□ -1.79
SMC4Q9NTJ3 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.84□□□□□ -1.79
SMC4Q9NTJ3 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.84□□□□□ -1.79
SMC4Q9NTJ3 AC008962.1-201ENST00000605729 304 ntBASIC3.84□□□□□ -1.79
SMC4Q9NTJ3 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SMC4Q9NTJ3 AL138713.1-201ENST00000624026 2130 ntBASIC3.84□□□□□ -1.79
SMC4Q9NTJ3 AC093831.2-201ENST00000624393 3427 ntBASIC3.84□□□□□ -1.8
SMC4Q9NTJ3 CCT4P2-201ENST00000233836 1548 ntBASIC3.84□□□□□ -1.8
SMC4Q9NTJ3 AC012321.1-201ENST00000561622 1588 ntBASIC3.84□□□□□ -1.8
SMC4Q9NTJ3 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.84□□□□□ -1.8
SMC4Q9NTJ3 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.84□□□□□ -1.8
SMC4Q9NTJ3 AC110774.1-201ENST00000623567 2018 ntBASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 SNORA71.1-201ENST00000364523 117 ntBASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 RNU6-432P-201ENST00000384196 109 ntBASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 RPS4XP3-201ENST00000398541 413 ntBASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 AC018630.2-202ENST00000422992 927 ntBASIC3.83□□□□□ -1.8
SMC4Q9NTJ3 TMEM167AP1-201ENST00000423409 219 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms