Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 RNU6-1095P-201ENST00000516148 108 ntBASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 RNU6-1003P-201ENST00000517099 105 ntBASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 AC025881.1-201ENST00000518851 512 ntBASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 AC060788.1-201ENST00000521318 469 ntBASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 AC109635.4-202ENST00000531666 412 ntBASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 CR383656.7-201ENST00000548164 174 ntBASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 AC024909.2-201ENST00000553035 286 ntBASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 AC012182.1-201ENST00000570133 895 ntBASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 TPMTP1-201ENST00000592307 737 ntBASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 CKS1BP3-201ENST00000600888 237 ntBASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 AC073544.2-201ENST00000601155 540 ntBASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 AC068831.7-201ENST00000616954 363 ntBASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 AC002076.2-201ENST00000617362 122 ntBASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 AC138932.5-201ENST00000617759 563 ntBASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 AC018755.4-201ENST00000619715 454 ntBASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 AC002550.2-201ENST00000621246 394 ntBASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 MIR622-201ENST00000638396 96 ntBASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 CCT4P2-201ENST00000233836 1548 ntBASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 FGF7P2-201ENST00000332473 296 ntBASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 Y_RNA.51-201ENST00000362725 102 ntBASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 RNA5SP50-201ENST00000363731 107 ntBASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 RNU6-853P-201ENST00000364306 107 ntBASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 RN7SKP227-201ENST00000364445 330 ntBASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 RNU5E-5P-201ENST00000365379 116 ntBASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 SNORA7.4-201ENST00000384249 137 ntBASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 RNY3P10-201ENST00000384764 102 ntBASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 AL591034.1-201ENST00000407447 340 ntBASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 RPL36AP36-201ENST00000418616 301 ntBASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 AC233728.2-201ENST00000425348 757 ntBASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 AC005019.1-201ENST00000436455 431 ntBASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 UBE2V1P13-201ENST00000436983 439 ntBASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 GDI2P2-201ENST00000445131 608 ntBASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 AL592447.1-201ENST00000447592 540 ntBASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 AP000705.1-201ENST00000454567 350 ntBASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 HMGB1P22-201ENST00000505315 124 ntBASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 FABP5P5-201ENST00000515537 406 ntBASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 RNA5SP468-201ENST00000516782 93 ntBASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 AP003497.1-201ENST00000528472 562 ntBASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 AP000873.5-201ENST00000533906 236 ntBASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 AC007115.1-201ENST00000546853 234 ntBASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 AL121603.1-201ENST00000553815 142 ntBASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 AC034105.3-201ENST00000565294 442 ntBASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 AC012414.6-201ENST00000568241 401 ntBASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 MIR3160-1-201ENST00000577972 85 ntBASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 MIR3922-201ENST00000585192 84 ntBASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 VN1R85P-201ENST00000601587 426 ntBASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 AC011451.2-201ENST00000604303 598 ntBASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 AL031176.1-201ENST00000604554 466 ntBASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 AC064872.1-201ENST00000604823 1072 ntBASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 AC091965.4-201ENST00000607691 587 ntBASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 AC079597.1-201ENST00000624306 508 ntBASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 AC004777.1-201ENST00000624317 287 ntBASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 GABRG2-229ENST00000641017 3628 ntBASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC28BQ9BUN5 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 FRG1BP-201ENST00000278882 761 ntBASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 MIR592-201ENST00000384959 97 ntBASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 U3.20-201ENST00000390909 217 ntBASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 SNORD115.1-201ENST00000391109 76 ntBASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 RNU6ATAC-201ENST00000408749 126 ntBASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 RN7SKP142-201ENST00000411236 328 ntBASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 CYCSP19-201ENST00000411715 316 ntBASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 AL137014.1-201ENST00000420490 1226 ntBASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 USP9YP36-201ENST00000424581 829 ntBASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 AC010153.1-201ENST00000432862 727 ntBASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 AC112653.1-201ENST00000443851 386 ntBASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 ST13P20-201ENST00000447996 1065 ntBASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 RAP1BP2-201ENST00000478270 544 ntBASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 AC090525.1-201ENST00000479116 478 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms