Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 AC005832.2-201ENST00000538921 1430 ntBASIC3.2□□□□□ -1.9
PKP2Q99959 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
PKP2Q99959 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PKP2Q99959 MFSD8-233ENST00000641482 4860 ntBASIC3.2□□□□□ -1.9
PKP2Q99959 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
PKP2Q99959 U3.6-201ENST00000363622 211 ntBASIC3.2□□□□□ -1.9
PKP2Q99959 RNA5SP72-201ENST00000364442 117 ntBASIC3.2□□□□□ -1.9
PKP2Q99959 SNORA14A-201ENST00000364773 135 ntBASIC3.2□□□□□ -1.9
PKP2Q99959 RNU6-952P-201ENST00000391164 108 ntBASIC3.2□□□□□ -1.9
PKP2Q99959 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
PKP2Q99959 AC007899.1-201ENST00000412776 775 ntBASIC3.2□□□□□ -1.9
PKP2Q99959 AF274854.1-201ENST00000413236 615 ntBASIC3.2□□□□□ -1.9
PKP2Q99959 HMGB1P11-201ENST00000413899 637 ntBASIC3.2□□□□□ -1.9
PKP2Q99959 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.2□□□□□ -1.9
PKP2Q99959 DBIP2-201ENST00000419076 262 ntBASIC3.2□□□□□ -1.9
PKP2Q99959 MTCO3P30-201ENST00000426425 670 ntBASIC3.2□□□□□ -1.9
PKP2Q99959 USP9YP14-201ENST00000430663 563 ntBASIC3.2□□□□□ -1.9
PKP2Q99959 AC091286.1-201ENST00000431233 461 ntBASIC3.2□□□□□ -1.9
PKP2Q99959 AL831737.1-201ENST00000441288 271 ntBASIC3.2□□□□□ -1.9
PKP2Q99959 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.2□□□□□ -1.9
PKP2Q99959 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.2□□□□□ -1.9
PKP2Q99959 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.2□□□□□ -1.9
PKP2Q99959 BX322784.1-201ENST00000455793 1077 ntBASIC3.2□□□□□ -1.9
PKP2Q99959 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.2□□□□□ -1.9
PKP2Q99959 RPL32P34-201ENST00000486380 400 ntBASIC3.2□□□□□ -1.9
PKP2Q99959 RN7SL283P-201ENST00000489055 303 ntBASIC3.2□□□□□ -1.9
PKP2Q99959 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.2□□□□□ -1.9
PKP2Q99959 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.2□□□□□ -1.9
PKP2Q99959 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.2□□□□□ -1.9
PKP2Q99959 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.2□□□□□ -1.9
PKP2Q99959 AC109464.2-201ENST00000510242 943 ntBASIC3.2□□□□□ -1.9
PKP2Q99959 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PKP2Q99959 AL117351.2-201ENST00000513571 157 ntBASIC3.2□□□□□ -1.9
PKP2Q99959 GMPSP1-201ENST00000514075 579 ntBASIC3.2□□□□□ -1.9
PKP2Q99959 RNU6-720P-201ENST00000516363 108 ntBASIC3.2□□□□□ -1.9
PKP2Q99959 RNU6-528P-201ENST00000516926 100 ntBASIC3.2□□□□□ -1.9
PKP2Q99959 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PKP2Q99959 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.2□□□□□ -1.9
PKP2Q99959 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.2□□□□□ -1.9
PKP2Q99959 AC091489.2-201ENST00000566263 604 ntBASIC3.2□□□□□ -1.9
PKP2Q99959 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.2□□□□□ -1.9
PKP2Q99959 AC011471.1-201ENST00000585766 187 ntBASIC3.2□□□□□ -1.9
PKP2Q99959 AL021997.1-201ENST00000605757 193 ntBASIC3.2□□□□□ -1.9
PKP2Q99959 AC005344.1-201ENST00000613391 459 ntBASIC3.2□□□□□ -1.9
PKP2Q99959 AL450472.3-201ENST00000615578 367 ntBASIC3.2□□□□□ -1.9
PKP2Q99959 AC015540.1-201ENST00000615828 501 ntBASIC3.2□□□□□ -1.9
PKP2Q99959 AL445264.1-201ENST00000621719 171 ntBASIC3.2□□□□□ -1.9
PKP2Q99959 AL354798.1-201ENST00000622505 329 ntBASIC3.2□□□□□ -1.9
PKP2Q99959 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.2□□□□□ -1.9
PKP2Q99959 AL034408.1-202ENST00000636088 415 ntBASIC3.2□□□□□ -1.9
PKP2Q99959 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PKP2Q99959 AP004289.2-201ENST00000444413 1457 ntBASIC3.2□□□□□ -1.9
PKP2Q99959 AC093831.2-201ENST00000624393 3427 ntBASIC3.2□□□□□ -1.9
PKP2Q99959 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
PKP2Q99959 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PKP2Q99959 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PKP2Q99959 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.19□□□□□ -1.9
PKP2Q99959 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PKP2Q99959 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
PKP2Q99959 RNU5F-6P-201ENST00000362979 116 ntBASIC3.19□□□□□ -1.9
PKP2Q99959 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.19□□□□□ -1.9
PKP2Q99959 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
PKP2Q99959 Y_RNA.517-201ENST00000384551 106 ntBASIC3.19□□□□□ -1.9
PKP2Q99959 MIR30B-201ENST00000384850 88 ntBASIC3.19□□□□□ -1.9
PKP2Q99959 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PKP2Q99959 MTCYBP36-201ENST00000404146 440 ntBASIC3.19□□□□□ -1.9
PKP2Q99959 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.19□□□□□ -1.9
PKP2Q99959 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.19□□□□□ -1.9
PKP2Q99959 BX842559.1-201ENST00000419615 532 ntBASIC3.19□□□□□ -1.9
PKP2Q99959 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.19□□□□□ -1.9
PKP2Q99959 RPL26P6-201ENST00000440913 438 ntBASIC3.19□□□□□ -1.9
PKP2Q99959 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.19□□□□□ -1.9
PKP2Q99959 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.19□□□□□ -1.9
PKP2Q99959 MTND1P27-201ENST00000451117 902 ntBASIC3.19□□□□□ -1.9
PKP2Q99959 SSXP1-201ENST00000453640 473 ntBASIC3.19□□□□□ -1.9
PKP2Q99959 TPT1P7-201ENST00000458300 517 ntBASIC3.19□□□□□ -1.9
PKP2Q99959 AC104472.2-201ENST00000469035 601 ntBASIC3.19□□□□□ -1.9
PKP2Q99959 RPL31P50-201ENST00000471002 296 ntBASIC3.19□□□□□ -1.9
PKP2Q99959 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.19□□□□□ -1.9
PKP2Q99959 ARL2BPP4-201ENST00000506854 471 ntBASIC3.19□□□□□ -1.9
PKP2Q99959 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.19□□□□□ -1.9
PKP2Q99959 AC026403.1-201ENST00000518938 295 ntBASIC3.19□□□□□ -1.9
PKP2Q99959 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.19□□□□□ -1.9
PKP2Q99959 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.19□□□□□ -1.9
PKP2Q99959 OR4T1P-201ENST00000554933 911 ntBASIC3.19□□□□□ -1.9
PKP2Q99959 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.19□□□□□ -1.9
PKP2Q99959 AC087499.8-201ENST00000578406 226 ntBASIC3.19□□□□□ -1.9
PKP2Q99959 MIR548AB-201ENST00000584917 84 ntBASIC3.19□□□□□ -1.9
PKP2Q99959 AC083760.1-201ENST00000589621 670 ntBASIC3.19□□□□□ -1.9
PKP2Q99959 AP001429.1-201ENST00000602568 530 ntBASIC3.19□□□□□ -1.9
PKP2Q99959 AP000403.1-201ENST00000603349 851 ntBASIC3.19□□□□□ -1.9
PKP2Q99959 AC073648.5-201ENST00000603502 305 ntBASIC3.19□□□□□ -1.9
PKP2Q99959 MIR6130-201ENST00000619419 109 ntBASIC3.19□□□□□ -1.9
PKP2Q99959 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PKP2Q99959 U4.6-201ENST00000621618 127 ntBASIC3.19□□□□□ -1.9
PKP2Q99959 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
PKP2Q99959 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PKP2Q99959 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.19□□□□□ -1.9
PKP2Q99959 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.19□□□□□ -1.9
PKP2Q99959 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms