Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PHOX2BQ99453 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PHOX2BQ99453 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PHOX2BQ99453 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PHOX2BQ99453 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PHOX2BQ99453 AC110373.1-201ENST00000505994 3505 ntBASIC5.86□□□□□ -1.47
PHOX2BQ99453 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
PHOX2BQ99453 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
PHOX2BQ99453 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PHOX2BQ99453 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC5.85□□□□□ -1.47
PHOX2BQ99453 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
PHOX2BQ99453 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PHOX2BQ99453 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PHOX2BQ99453 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
PHOX2BQ99453 RFX3-203ENST00000381984 364 ntTSL 3 BASIC5.85□□□□□ -1.47
PHOX2BQ99453 RNU6-1117P-201ENST00000384525 104 ntBASIC5.85□□□□□ -1.47
PHOX2BQ99453 RNU6-21P-201ENST00000384710 107 ntBASIC5.85□□□□□ -1.47
PHOX2BQ99453 MIR192-201ENST00000384915 110 ntBASIC5.85□□□□□ -1.47
PHOX2BQ99453 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5.85□□□□□ -1.47
PHOX2BQ99453 AC005002.2-201ENST00000438228 269 ntBASIC5.85□□□□□ -1.47
PHOX2BQ99453 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.85□□□□□ -1.47
PHOX2BQ99453 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.85□□□□□ -1.47
PHOX2BQ99453 TOMM22P6-201ENST00000465035 409 ntBASIC5.85□□□□□ -1.47
PHOX2BQ99453 AC114728.1-201ENST00000488289 483 ntBASIC5.85□□□□□ -1.47
PHOX2BQ99453 RNA5SP290-201ENST00000517133 127 ntBASIC5.85□□□□□ -1.47
PHOX2BQ99453 RNA5SP291-201ENST00000517222 105 ntBASIC5.85□□□□□ -1.47
PHOX2BQ99453 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.85□□□□□ -1.47
PHOX2BQ99453 FAM60BP-201ENST00000578364 658 ntBASIC5.85□□□□□ -1.47
PHOX2BQ99453 MIR4282-201ENST00000583613 67 ntBASIC5.85□□□□□ -1.47
PHOX2BQ99453 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.85□□□□□ -1.47
PHOX2BQ99453 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.85□□□□□ -1.47
PHOX2BQ99453 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PHOX2BQ99453 AC022893.2-201ENST00000564832 3296 ntBASIC5.85□□□□□ -1.47
PHOX2BQ99453 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
PHOX2BQ99453 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
PHOX2BQ99453 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
PHOX2BQ99453 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.85□□□□□ -1.47
PHOX2BQ99453 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.85□□□□□ -1.47
PHOX2BQ99453 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PHOX2BQ99453 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
PHOX2BQ99453 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
PHOX2BQ99453 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.84□□□□□ -1.47
PHOX2BQ99453 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
PHOX2BQ99453 AL731532.1-201ENST00000623972 4236 ntBASIC5.84□□□□□ -1.47
PHOX2BQ99453 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.84□□□□□ -1.47
PHOX2BQ99453 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
PHOX2BQ99453 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.84□□□□□ -1.47
PHOX2BQ99453 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
PHOX2BQ99453 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PHOX2BQ99453 Y_RNA.82-201ENST00000363000 102 ntBASIC5.84□□□□□ -1.47
PHOX2BQ99453 Y_RNA.92-201ENST00000363043 102 ntBASIC5.84□□□□□ -1.47
PHOX2BQ99453 Y_RNA.235-201ENST00000364412 102 ntBASIC5.84□□□□□ -1.47
PHOX2BQ99453 RNVU1-6-201ENST00000364688 164 ntBASIC5.84□□□□□ -1.47
PHOX2BQ99453 Y_RNA.275-201ENST00000364726 110 ntBASIC5.84□□□□□ -1.47
PHOX2BQ99453 Y_RNA.306-201ENST00000365015 102 ntBASIC5.84□□□□□ -1.47
PHOX2BQ99453 Y_RNA.312-201ENST00000365089 102 ntBASIC5.84□□□□□ -1.47
PHOX2BQ99453 Y_RNA.322-201ENST00000365151 102 ntBASIC5.84□□□□□ -1.47
PHOX2BQ99453 RNU6-47P-201ENST00000383866 107 ntBASIC5.84□□□□□ -1.47
PHOX2BQ99453 RNU6-843P-201ENST00000384454 104 ntBASIC5.84□□□□□ -1.47
PHOX2BQ99453 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PHOX2BQ99453 EIF1AXP1-201ENST00000419267 435 ntBASIC5.84□□□□□ -1.47
PHOX2BQ99453 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.84□□□□□ -1.47
PHOX2BQ99453 AC009296.1-201ENST00000443146 155 ntBASIC5.84□□□□□ -1.47
PHOX2BQ99453 AL078601.1-201ENST00000444542 271 ntBASIC5.84□□□□□ -1.47
PHOX2BQ99453 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC5.84□□□□□ -1.47
PHOX2BQ99453 Y_RNA.650-201ENST00000459002 102 ntBASIC5.84□□□□□ -1.47
PHOX2BQ99453 RPL23AP65-201ENST00000475608 468 ntBASIC5.84□□□□□ -1.47
PHOX2BQ99453 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC5.84□□□□□ -1.47
PHOX2BQ99453 Y_RNA.777-201ENST00000516982 102 ntBASIC5.84□□□□□ -1.47
PHOX2BQ99453 RN7SKP272-201ENST00000516988 232 ntBASIC5.84□□□□□ -1.47
PHOX2BQ99453 SNORA31.19-201ENST00000517079 126 ntBASIC5.84□□□□□ -1.47
PHOX2BQ99453 RNU4-60P-201ENST00000517239 135 ntBASIC5.84□□□□□ -1.47
PHOX2BQ99453 TOMM20P2-201ENST00000540082 421 ntBASIC5.84□□□□□ -1.47
PHOX2BQ99453 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.84□□□□□ -1.47
PHOX2BQ99453 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.84□□□□□ -1.47
PHOX2BQ99453 Y_RNA.771-201ENST00000598668 102 ntBASIC5.84□□□□□ -1.47
PHOX2BQ99453 Y_RNA.789-201ENST00000622480 102 ntBASIC5.84□□□□□ -1.47
PHOX2BQ99453 AC138965.3-201ENST00000623875 498 ntBASIC5.84□□□□□ -1.47
PHOX2BQ99453 AL132640.3-201ENST00000630473 177 ntBASIC5.84□□□□□ -1.47
PHOX2BQ99453 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
PHOX2BQ99453 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PHOX2BQ99453 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
PHOX2BQ99453 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PHOX2BQ99453 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PHOX2BQ99453 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
PHOX2BQ99453 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
PHOX2BQ99453 AL450326.2-201ENST00000421913 1962 ntBASIC5.84□□□□□ -1.48
PHOX2BQ99453 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
PHOX2BQ99453 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.83□□□□□ -1.48
PHOX2BQ99453 AC004925.1-201ENST00000624256 2706 ntBASIC5.83□□□□□ -1.48
PHOX2BQ99453 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PHOX2BQ99453 Y_RNA.8-201ENST00000362353 102 ntBASIC5.83□□□□□ -1.48
PHOX2BQ99453 RNU6-336P-201ENST00000364891 107 ntBASIC5.83□□□□□ -1.48
PHOX2BQ99453 AL133173.1-201ENST00000423458 397 ntBASIC5.83□□□□□ -1.48
PHOX2BQ99453 AC007560.1-201ENST00000426912 237 ntBASIC5.83□□□□□ -1.48
PHOX2BQ99453 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.83□□□□□ -1.48
PHOX2BQ99453 RPS15AP7-201ENST00000439294 405 ntBASIC5.83□□□□□ -1.48
PHOX2BQ99453 TDGF1P1-201ENST00000445734 527 ntBASIC5.83□□□□□ -1.48
PHOX2BQ99453 Y_RNA.638-201ENST00000459374 113 ntBASIC5.83□□□□□ -1.48
PHOX2BQ99453 RN7SL51P-201ENST00000468230 285 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms